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Structure and sucrose binding mechanism of the plant SUC1 sucrose transporter

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Sucrose import from photosynthetic tissues into the phloem is mediated by transporters from the low-affinity sucrose transporter family (SUC/SUT family). Furthermore, sucrose redistribution to other tissues is driven by phloem sap movement, the product of high turgor pressure created by this import activity. Additionally, sink organs such as fruits, cereals and seeds that accumulate high concentrations of sugar also depend on this active transport of sucrose. Here we present the structure of the sucrose–proton symporter, Arabidopsis thaliana SUC1, in an outward open conformation at 2.7 Å resolution, together with molecular dynamics simulations and biochemical characterization. We identify the key acidic residue required for proton-driven sucrose uptake and describe how protonation and sucrose binding are strongly coupled. Sucrose binding is a two-step process, with initial recognition mediated by the glucosyl moiety binding directly to the key acidic residue in a stringent pH-dependent manner. Our results explain how low-affinity sucrose transport is achieved in plants, and pinpoint a range of SUC binders that help define selectivity. Our data demonstrate a new mode for proton-driven symport with links to cation-driven symport and provide a broad model for general low-affinity transport in highly enriched substrate environments.

Original languageEnglish
JournalNature Plants
Volume9
Issue6
Pages (from-to)938-950
Number of pages13
ISSN2055-0278
DOIs
Publication statusPublished - Jun 2023

Bibliographical note

Funding Information:
We thank D. Stokes and U. Hammes for comments on the manuscript. We acknowledge beamlines I24 and I04 at the Diamond Light Source and beamline BioMAX at the MAX IV Laboratory, where X-ray data were collected, and DESY-PETRA III for crystal screening. MD computations were performed at the Grendel-S cluster of the Centre for Scientific Computing Aarhus. We also thank M. Nadzieja (Plant Molecular Biology, Department of Molecular Biology and Genetics, Aarhus University) for instruction in confocal laser microscopy. MD computations were made possible by grants from the Novo Nordisk Foundation (NNF18OC0032608 and NF20OC0065431) and the Lundbeck Foundation (R346-2020-1944) to B.S. This project received funding from the European Research Council under the European Union’s Horizon 2020 research and innovation programme (grant agreement no. 101000936) to B.P.P.

Funding Information:
We thank D. Stokes and U. Hammes for comments on the manuscript. We acknowledge beamlines I24 and I04 at the Diamond Light Source and beamline BioMAX at the MAX IV Laboratory, where X-ray data were collected, and DESY-PETRA III for crystal screening. MD computations were performed at the Grendel-S cluster of the Centre for Scientific Computing Aarhus. We also thank M. Nadzieja (Plant Molecular Biology, Department of Molecular Biology and Genetics, Aarhus University) for instruction in confocal laser microscopy. MD computations were made possible by grants from the Novo Nordisk Foundation (NNF18OC0032608 and NF20OC0065431) and the Lundbeck Foundation (R346-2020-1944) to B.S. This project received funding from the European Research Council under the European Union’s Horizon 2020 research and innovation programme (grant agreement no. 101000936) to B.P.P.

Publisher Copyright:
© 2023, The Author(s).

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