SPIKEPIPE: A metagenomic pipeline for the accurate quantification of eukaryotic species occurrences and intraspecific abundance change using DNA barcodes or mitogenomes

Y. Ji; Tea Huotari; Tomas Roslin; Niels Martin Schmidt; J. Wang; Douglas W.  Yu; Otso Ovaskainen

doi:10.1111/1755-0998.13057

SPIKEPIPE: A metagenomic pipeline for the accurate quantification of eukaryotic species occurrences and intraspecific abundance change using DNA barcodes or mitogenomes

Y. Ji, Tea Huotari, Tomas Roslin, Niels Martin Schmidt, J. Wang, Douglas W. Yu, Otso Ovaskainen

Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

51 Citations (Scopus)

Original language	English
Journal	Molecular Ecology Resources
Volume	20
Issue	1
Pages (from-to)	256–267
Number of pages	12
ISSN	1755-098X
DOIs	https://doi.org/10.1111/1755-0998.13057
Publication status	Published - Jan 2020

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10.1111/1755-0998.13057

https://www.biorxiv.org/content/biorxiv/early/2019/06/16/533737.full.pdfLicence: CC BY-NC-ND

BioBasis Zackenberg
Schmidt, N. M. (Project manager) & Hansen, L. H. (Participant)
01/04/1996 → …
Project: Research

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title = "SPIKEPIPE: A metagenomic pipeline for the accurate quantification of eukaryotic species occurrences and intraspecific abundance change using DNA barcodes or mitogenomes",

author = "Y. Ji and Tea Huotari and Tomas Roslin and Schmidt, {Niels Martin} and J. Wang and Yu, {Douglas W.} and Otso Ovaskainen",

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SPIKEPIPE: A metagenomic pipeline for the accurate quantification of eukaryotic species occurrences and intraspecific abundance change using DNA barcodes or mitogenomes. / Ji, Y.; Huotari, Tea; Roslin, Tomas et al.
In: Molecular Ecology Resources, Vol. 20, No. 1, 01.2020, p. 256–267.

Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

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AU - Ji, Y.

AU - Huotari, Tea

AU - Roslin, Tomas

AU - Schmidt, Niels Martin

AU - Wang, J.

AU - Yu, Douglas W.

AU - Ovaskainen, Otso

PY - 2020/1

Y1 - 2020/1

U2 - 10.1111/1755-0998.13057

DO - 10.1111/1755-0998.13057

M3 - Journal article

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SN - 1755-098X

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JO - Molecular Ecology Resources

JF - Molecular Ecology Resources

IS - 1

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SPIKEPIPE: A metagenomic pipeline for the accurate quantification of eukaryotic species occurrences and intraspecific abundance change using DNA barcodes or mitogenomes

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Projects

BioBasis Zackenberg

Cite this