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ncIDP-assign: a SPARKY extension for the effective NMR assignment of intrinsically disordered proteins
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- Kamil Tamiola ,
- Frans A.A. Mulder
We describe here the ncIDP-assign extension for the popular NMR assignment program SPARKY, which aids in the sequence-specific resonance assignment of intrinsically disordered proteins (IDPs). The assignment plugin greatly facilitates the effective matching of a set of connected resonances to the correct position in the sequence by making use of IDP random coil chemical shifts. AVAILABILITY: The ncIDP-assign extension is available at http://www.protein-nmr.org/.
| Original language | English |
|---|---|
| Journal | Bioinformatics (Online) |
| Volume | 27 |
| Issue | 7 |
| Pages (from-to) | 1039-40 |
| Number of pages | 2 |
| ISSN | 1367-4811 |
| DOIs | |
| Publication status | Published - 2011 |
- Algorithms, Cell Adhesion Molecules, Neuronal, Humans, Magnetic Resonance Imaging, Membrane Proteins, Nerve Tissue Proteins, Nuclear Magnetic Resonance, Biomolecular, Protein Conformation, Software
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