Genomic Position Mapping Discrepancies of Commercial SNP Chips

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  • João Fadista, Lund University, Sweden
  • Christian Bendixen, Denmark
The field of genetics has come to rely heavily on commercial genotyping arrays and accompanying annotations for insights into genotype-phenotype associations. However, in order to avoid errors and false leads, it is imperative that the annotation of SNP chromosomal positions is accurate and unambiguous. We report on genomic positional discrepancies of various SNP chips for human, cattle and mouse species, and discuss their causes and consequences.
Original languageEnglish
JournalP L o S One
Volume7
Issue2
Pages (from-to)e31025
Number of pages5
ISSN1932-6203
DOIs
Publication statusPublished - 7 Feb 2012

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