Genomic Analyses of Methicillin-Resistant Staphylococcus pseudintermedius from Companion Animals Reveal ChangingClonal Populations, Multidrug Resistance, and Virulence

Mattias Myrenås, Karl Pedersen, Ulrika Windahl*

*Corresponding author for this work

Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

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Abstract

Background/Objectives: Staphylococcus pseudintermedius is part of the normal microbiota in
dogs. Since 2006, an increase in multidrug-resistant clones of methicillin-resistant S. pseudintermedius
has been reported, as well as zoonotic transmission. Longitudinal investigations into clonal population
structures, antibiotic resistance patterns, and the presence of resistance and virulence genes
are important tools for gaining knowledge of the mechanisms behind the emergence of such clones.
Methods: We investigated 87% of all non-repetitive MRSP isolates from dogs and cats in Sweden
over a ten-year period (n = 356). All isolates were subjected to staphylococcal chromosomal cassette
mec identification, whole-genome sequencing, multi-locus sequence typing, and analyses of genomic
relatedness, as well as investigation of phenotypical resistance patterns and the presence of antibiotic
resistance genes and virulence genes. Results: A considerable increase over time in the number of
clonal lineages present was observed, indicating genomic diversification, and four clones became
dominant: ST71, ST258, ST265, and ST551. In total, 96% of the isolates were multidrug-resistant.
Statistically significant differences in resistance to several antibiotic classes between the four dominant
clones were present. All isolates carried several virulence genes encoding factors associated with
attachment, colonization, toxin synthesis, quorum sensing, antibiotic resistance, and immune evasion.
Original languageEnglish
Article number962
JournalAntibiotics
Volume13
Issue10
Number of pages21
ISSN2079-6382
DOIs
Publication statusPublished - 12 Oct 2024

Keywords

  • MRSP
  • clonal lineages
  • canine
  • dog
  • multidrug-resistant staphylococci
  • SCCmec
  • whole-genome sequencing

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