Divorcing folding from function: how acylation affects the membrane-perturbing properties of an antimicrobial peptide

Brian Stougaard Vad, Line Aagot Hede Thomsen, Kresten Bertelsen, Magnus Franzmann, Jan Mondrup Pedersen, Søren Bang Nielsen, Thomas Vosegaard, Zuzana Valnickova, Troels Skrydstrup, Jan J. Enghild, Reinhard Wimmer, Niels Christian Nielsen, Daniel Otzen

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Many small cationic peptides, which are unstructured in aqueous solution, have antimicrobial properties. These properties are assumed to be linked to their ability to permeabilize bacterial membranes, accompanied by the transition to an alpha-helical folding state. Here we show that there is no direct link between folding of the antimicrobial peptide Novicidin (Nc) and its membrane permeabilization. N-terminal acylation with C8-C16 alkyl chains and the inclusion of anionic lipids both increase Nc's ability to form alpha-helical structure in the presence of vesicles. Nevertheless, both acylation and anionic lipids reduce the extent of permeabilization of these vesicles and lead to slower permeabilization kinetics. Furthermore, acylation significantly decreases antimicrobial activity. Although acyl chains of increasing length also increase the tendency of the peptides to aggregate in solution, this cannot rationalize our results since permeabilization and antimicrobial activities are observed well below concentrations where aggregation occurs. This suggests that significant induction of alpha-helical structure is not a prerequisite for membrane perturbation in this class of antimicrobial peptides. Our data suggests that for Nc, induction of alpha-helical structure may inhibit rather than facilitate membrane disruption, and that a more peripheral interaction may be the most efficient permeabilization mechanism. Furthermore, acylation leads to a deeper embedding in the membrane, which could lead to an anti-permeabilizing "plugging" effect.
Original languageEnglish
JournalB B A - Proteins and Proteomics
Pages (from-to)806-20
Number of pages15
Publication statusPublished - 2010


  • Acylation
  • Amino Acid Sequence
  • Antimicrobial Cationic Peptides
  • Cell Membrane Permeability
  • Escherichia coli
  • Fluorescence Polarization
  • Liposomes
  • Membrane Lipids
  • Micelles
  • Models, Molecular
  • Molecular Sequence Data
  • Nuclear Magnetic Resonance, Biomolecular
  • Phase Transition
  • Protein Folding
  • Protein Multimerization
  • Protein Structure, Secondary


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