A blood-brain penetrant RNA-targeted small molecule triggers elimination of r(G4C2)exp in c9ALS/FTD via the nuclear RNA exosome. / Bush, Jessica A.; Meyer, Samantha M.; Fuerst, Rita et al.
In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 119, No. 48, e2210532119, 11.2022.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome. / Gerlach, Piotr; Garland, William; Lingaraju, Mahesh et al.
In: Molecular Cell, Vol. 82, No. 13, 07.07.2022, p. 2505-2518.e7.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Chromatin modifier HUSH co-operates with RNA decay factor NEXT to restrict transposable element expression. / Garland, William; Müller, Iris; Wu, Mengjun et al.
In: Molecular Cell, Vol. 82, No. 9, 05.2022, p. 1691-1707.e8.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Control of non-productive RNA polymerase II transcription via its early termination in metazoans. / Rouvière, Jérôme O.; Lykke-Andersen, Søren; Jensen, Torben Heick.
In: Biochemical Society Transactions, Vol. 50, No. 1, 02.2022, p. 283-295.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Rapid factor depletion highlights intricacies of nucleoplasmic RNA degradation. / Gockert, Maria; Schmid, Manfred; Jakobsen, Lis et al.
In: Nucleic Acids Research, Vol. 50, No. 3, 02.2022, p. 1583-1600.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The germinal center reaction depends on RNA methylation and divergent functions of specific methyl readers. / Grenov, Amalie C.; Moss, Lihee; Edelheit, Sarit et al.
In: The Journal of Experimental Medicine, Vol. 218, No. 10, e20210360, 10.2021.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
hnRNPH1-MTR4 complex-mediated regulation of NEAT1v2 stability is critical for IL8 expression. / Tanu, Tanzina; Taniue, Kenzui; Imamura, Katsutoshi et al.
In: RNA Biology, Vol. 18, No. sup1, 10.2021, p. 537-547.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Three-layered control of mRNA poly(A) tail synthesis in Saccharomyces cerevisiae. / Turtola, Matti; Manav, Cemre M.; Kumar, Ananthanarayanan et al.
In: Genes and Development, Vol. 35, No. 17-18, 09.2021, p. 1290-1303.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Global view on the metabolism of RNA poly(A) tails in yeast Saccharomyces cerevisiae. / Tudek, Agnieszka; Krawczyk, Paweł S.; Mroczek, Seweryn et al.
In: Nature Communications, Vol. 12, 4951, 08.2021.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
ARS2/SRRT : At the nexus of RNA polymerase II transcription, transcript maturation and quality control. / Lykke-Andersen, Søren; Rouvière, Jérôme O.; Jensen, Torben Heick.
In: Biochemical Society Transactions, Vol. 49, No. 3, 06.2021, p. 1325-1336.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Integrator is a genome-wide attenuator of non-productive transcription. / Lykke-Andersen, Søren; Žumer, Kristina; Molska, Ewa Šmidová et al.
In: Molecular Cell, Vol. 81, No. 3, 02.2021, p. 514-529.e6.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
3' End sequencing of pA+ and pA- RNAs. / Wu, Guifen; Schmid, Manfred; Jensen, Torben Heick.
mRNA 3' End Processing and Metabolism. ed. / Bin Tian. Cambridge, MA : Academic Press, 2021. p. 139-164 (Methods in Enzymology, Vol. 655).Research output: Contribution to book/anthology/report/proceeding › Book chapter › Research
circZNF827 nucleates a transcription inhibitory complex to balance neuronal differentiation. / Hollensen, Anne Kruse; Thomsen, Henriette Sylvain; Lloret-Llinares, Marta et al.
In: eLife, Vol. 9, e58478, 11.2020.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Affinity proteomic dissection of the human nuclear cap-binding complex interactome. / Dou, Yuhui; Kalmykova, Svetlana; Pashkova, Maria et al.
In: Nucleic Acids Research, Vol. 48, No. 18, 10.2020, p. 10456-10469.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
NCBP3 positively impacts mRNA biogenesis. / Dou, Yuhui; Barbosa, Isabelle; Jiang, Hua et al.
In: Nucleic Acids Research, Vol. 48, No. 18, 10.2020, p. 10413-10427.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The RNA exosome shapes the expression of key protein-coding genes. / Wu, Mengjun; Karadoulama, Evdoxia; Lloret-Llinares, Marta et al.
In: Nucleic Acids Research, Vol. 48, No. 15, 09.2020, p. 8509-8528.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Mapping domains of ARS2 critical for its RNA decay capacity. / Melko, Mireille; Winczura, Kinga; Rouvière, Jérôme Olivier et al.
In: Nucleic Acids Research, Vol. 48, No. 12, 07.2020, p. 6943-6953.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Monitoring protein-RNA interaction dynamics in vivo at high temporal resolution using χCRAC. / McKellar, Stuart W.; Ivanova, Ivayla; van Nues, Robert W. et al.
In: Journal of Visualized Experiments, Vol. 2020, No. 159, e61027, 05.2020.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The human ZC3H3 and RBM26/27 proteins are critical for PAXT-mediated nuclear RNA decay. / Silla, Toomas; Schmid, Manfred; Dou, Yuhui et al.
In: Nucleic Acids Research, Vol. 48, No. 5, 01.2020, p. 2518-2530.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
A Two-Layered Targeting Mechanism Underlies Nuclear RNA Sorting by the Human Exosome. / Wu, Guifen; Schmid, Manfred; Rib, Leonor et al.
In: Cell Reports, Vol. 30, No. 7, 2020, p. 2387-2401.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Global Identification of Human Exosome Substrates Using RNA Interference and RNA Sequencing. / Lloret-Llinares, Marta; Jensen, Torben Heick.
The Eukaryotic RNA Exosome: Methods and Protocols. Humana Press, 2020. p. 127-145 (Methods in Molecular Biology, Vol. 2062).Research output: Contribution to book/anthology/report/proceeding › Book chapter › Research › peer-review
Integrator restrains paraspeckles assembly by promoting isoform switching of the lncRNA NEAT1. / Barra, Jasmine; Gaidos, Gabriel S.; Blumenthal, Ezra et al.
In: Science Advances, Vol. 6, No. 27, eaaz9072, 2020.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Nuclear sorting of RNA. / Garland, William; Jensen, Torben Heick.
In: Wiley Interdisciplinary Reviews: RNA, Vol. 11, No. 2, e1572, 2020.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
The MTR4 helicase recruits nuclear adaptors of the human RNA exosome using distinct arch-interacting motifs. / Lingaraju, Mahesh; Johnsen, Dennis; Schlundt, Andreas et al.
In: Nature Communications, Vol. 10, No. 1, 3393, 12.2019.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
A Functional Link between Nuclear RNA Decay and Transcriptional Control Mediated by the Polycomb Repressive Complex 2. / Garland, William; Comet, Itys; Wu, Mengjun et al.
In: Cell Reports, Vol. 29, No. 7, 11.2019, p. 1800-1811.e6.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Preparation of RNA 3' End Sequencing Libraries of Total and 4-thiouracil Labeled RNA for Simultaneous Measurement of Transcription, RNA Synthesis and Decay in S. cerevisiae. / Schmid, Manfred; Tudek, Agnieszka; Jensen, Torben Heick.
In: Bio-protocol, Vol. 9, No. 6, 20.03.2019.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Escaping nuclear decay : the significance of mRNA export for gene expression. / Tudek, Agnieszka; Schmid, Manfred; Jensen, Torben Heick.
In: Current Genetics, Vol. 65, No. 2, 2019, p. 473-476.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
The Nuclear RNA Exosome and Its Cofactors. / Schmid, Manfred; Jensen, Torben Heick.
The Biology of mRNA: Structure and Function. ed. / M Oeffinger; D Zenklusen. Springer, 2019. p. 113-132 (Advances in Experimental Medicine and Biology, Vol. 1203).Research output: Contribution to book/anthology/report/proceeding › Book chapter › Research › peer-review
The long noncoding RNA NEAT1_1 is seemingly dispensable for normal tissue homeostasis and cancer cell growth. / Adriaens, Carmen; Rambow, Florian; Bervoets, Greet et al.
In: RNA (New York, N.Y.), Vol. 25, No. 12, 2019, p. 1681-1695.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The RNA exosome contributes to gene expression regulation during stem cell differentiation. / Lloret-Llinares, Marta; Karadoulama, Evdoxia; Chen, Yun et al.
In: Nucleic Acids Research, Vol. 46, No. 21, 30.11.2018, p. 11502-11513.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The multitasking polyA tail : nuclear RNA maturation, degradation and export. / Tudek, Agnieszka; Lloret-Llinares, Marta; Jensen, Torben Heick.
In: Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 373, No. 1762, 15.11.2018.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Box C/D snoRNP Autoregulation by a cis-Acting snoRNA in the NOP56 Pre-mRNA. / Lykke-Andersen, Søren; Ardal, Britt Kidmose; Hollensen, Anne Kruse et al.
In: Molecular Cell, Vol. 72, No. 1, 04.10.2018, p. 99-111.e1-e5.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
A Nuclear Export Block Triggers the Decay of Newly Synthesized Polyadenylated RNA. / Tudek, Agnieszka; Schmid, Manfred; Makaras, Marius et al.
In: Cell Reports, Vol. 24, No. 9, 28.08.2018, p. 2457-2467.e7.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Simultaneous Measurement of Transcriptional and Post-transcriptional Parameters by 3′ End RNA-Seq. / Schmid, Manfred; Tudek, Agnieszka; Jensen, Torben Heick.
In: Cell Reports, Vol. 24, 28.08.2018, p. 2468-2478.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Controlling nuclear RNA levels. / Schmid, Manfred; Jensen, Torben Heick.
In: Nature Reviews. Genetics, Vol. 19, 10.08.2018, p. 518-529.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Diminished nuclear RNA decay upon Salmonella infection upregulates antibacterial noncoding RNAs. / Imamura, Katsutoshi; Takaya, Akiko; Ishida, Yo ichi et al.
In: EMBO Journal, Vol. 37, No. 13, e97723, 02.07.2018.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Transcription start site analysis reveals widespread divergent transcription in D. melanogaster and core promoter-encoded enhancer activities. / Rennie, Sarah; Dalby, Maria; Lloret-Llinares, Marta et al.
In: Nucleic Acids Research, Vol. 46, No. 11, 20.06.2018, p. 5455–5469.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The RNA Exosome Adaptor ZFC3H1 Functionally Competes with Nuclear Export Activity to Retain Target Transcripts. / Silla, Toomas; Karadoulama, Evdoxia; Mąkosa, Dawid et al.
In: Cell Reports, Vol. 23, No. 7, 15.05.2018, p. 2199-2210.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Characterising cis-regulatory variation in the transcriptome of histologically normal and tumour-derived pancreatic tissues. / Zhang, Mingfeng; Lykke-Andersen, Soren; Zhu, Bin et al.
In: Gut, Vol. 67, No. 3, 01.03.2018, p. 521-533.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions. / Winczura, Kinga; Schmid, Manfred; Iasillo, Claudia et al.
In: Cell Reports, Vol. 22, No. 1, 02.01.2018, p. 44-58.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Polo-like kinase 2 modulates α-synuclein protein levels by regulating its mRNA production. / Kofoed, Rikke H; Zheng, Jin; Ferreira, Nelson et al.
In: Neurobiology of Disease, Vol. 106, 17.10.2017, p. 49-62.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
ARS2 is a general suppressor of pervasive transcription. / Iasillo, Claudia; Schmid, Manfred; Yahia, Yousra et al.
In: Nucleic Acids Research, Vol. 45, No. 17, 29.09.2017, p. 10229-10241.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Lariat capping as a tool to manipulate the 5' end of individual yeast mRNA species in vivo. / Krogh, Nicolai; Pietschmann, Max; Schmid, Manfred et al.
In: RNA, Vol. 23, No. 5, 05.2017, p. 683-695.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Mutually Exclusive CBC-Containing Complexes Contribute to RNA Fate. / Giacometti, Simone; Benbahouche, Nour El Houda; Domanski, Michal et al.
In: Cell Reports, Vol. 18, No. 11, 14.03.2017, p. 2635-2650.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Nuclear Decay Factors Crack Up mRNA. / Tudek, Agnieszka; Schmid, Manfred; Jensen, Torben Heick.
In: Molecular Cell, Vol. 65, No. 5, 02.03.2017, p. 775-776.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Targeting the nuclear RNA exosome : Poly(A) binding proteins enter the stage. / Meola, Nicola; Jensen, Torben Heick.
In: RNA Biology, Vol. 14, No. 7, 2017, p. 820-826.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors. / Falk, Sebastian; Finogenova, Ksenia; Sørensen, Mireille Melko et al.
In: Nature Communications, Vol. 7, 13573, 01.12.2016.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts. / Meola, Nicola; Domanski, Michal; Karadoulama, Evdoxia et al.
In: Molecular Cell, Vol. 64, No. 3, 03.11.2016, p. 520-533.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Escape from rapid nuclear mRNA decay in the yeast Saccharomyces cerevisiae depends on Nab2 and Mex67. / Tudek, Agnieszka; Schmid, Manfred; Barrass, David et al.
2016. Poster session presented at EMBO/EMBL meeting, Heidelberg, Germany.Research output: Contribution to conference › Poster › Research
Principles for RNA metabolism and alternative transcription initiation within closely spaced promoters. / Chen, Yun; Pai, Athma A.; Herudek, Jan et al.
In: Nature Genetics, Vol. 48, No. 9, 01.09.2016, p. 984-994.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Purification and analysis of endogenous human RNA exosome complexes. / Domanski, Michal; Upla, Paula; Rice, William J. et al.
In: RNA, Vol. 22, No. 9, 01.09.2016, p. 1467-1475.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
A conserved virus-induced cytoplasmic TRAMP-like complex recruits the exosome to target viral RNA for degradation. / Molleston, Jerome M.; Sabin, Leah R.; Moy, Ryan H. et al.
In: Genes & Development, Vol. 30, No. 14, 15.07.2016, p. 1658-1670.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Relationships between PROMPT and gene expression. / Llinares, Marta Lloret; Mapendano, Christophe Kamungu; Martlev, Lasse Hynkemejer et al.
In: RNA Biology, Vol. 13, No. 1, 02.01.2016, p. 6-14.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Human Gene Promoters Are Intrinsically Bidirectional. / Andersson, Robin; Chen, Yun; Core, Leighton et al.
In: Molecular Cell, Vol. 60, No. 3, 05.11.2015, p. 346-347.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Letter › peer-review
Nonsense-mediated mRNA decay : an intricate machinery that shapes transcriptomes. / Lykke-Andersen, Søren; Jensen, Torben Heick.
In: Nature Reviews. Molecular Cell Biology, Vol. 16, 11.2015, p. 665-677.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The Nuclear PolyA-Binding Protein Nab2p Is Essential for mRNA Production. / Schmid, Manfred; Olszewski, Pawel; Pelechano, Vicent et al.
In: Cell Reports, Vol. 12, No. 1, 07.07.2015, p. 128-139.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Rapid, optimized interactomic screening. / Hakhverdyan, Zhanna; Domanski, Michal; Hough, Loren E et al.
In: Nature Methods, Vol. 12, No. 6, 06.2015, p. 553-560.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The Human Nuclear Exosome Targeting Complex Is Loaded onto Newly Synthesized RNA to Direct Early Ribonucleolysis. / Lubas, Michal Szymon; Andersen, Peter Refsing; Schein, Aleks et al.
In: Cell Reports, Vol. 10, No. 2, 13.01.2015, p. 178-183.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Human nonsense-mediated RNA decay initiates widely by endonucleolysis and targets snoRNA host genes. / Lykke-Andersen, Søren; Chen, Yun; Ardal, Britt et al.
In: Genes & Development, Vol. 28, No. 22, 15.11.2014, p. 2498-2517.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
SnapShot : nuclear RNAPII transcript modification. / Schmid, Manfred; Jensen, Torben Heick.
In: Cell, Vol. 157, No. 5, 22.05.2014, p. 1244-1244.e1-2.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Rat1p maintains RNA polymerase II CTD phosphorylation balance. / Jimeno-González, Silvia; Schmid, Manfred; Malagon, Francisco et al.
In: RNA, Vol. 20, No. 4, 20.04.2014, p. 551-558.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
An atlas of active enhancers across human cell types and tissues. / Andersson, Robin; Gebhard, Claudia; Miguel-Escalada, Irene et al.
In: Nature, Vol. 507, 27.03.2014, p. 455-461.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Nuclear stability and transcriptional directionality separate functionally distinct RNA species. / Andersson, Robin; Andersen, Peter Refsing; Valen, Eivind et al.
In: Nature Communications, Vol. 5, 5336, 2014, p. 1-10.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
CBC-ARS2 stimulates 3'-end maturation of multiple RNA families and favors cap-proximal processing. / Hallais, Marie; Pontvianne, Frédéric; Andersen, Peter Refsing et al.
In: Nature Structural and Molecular Biology, Vol. 20, No. 12, 24.11.2013, p. 1358-1366.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The human cap-binding complex is functionally connected to the nuclear RNA exosome. / Andersen, Peter Refsing; Domanski, Michal; Kristiansen, Maiken S et al.
In: Nature Structural and Molecular Biology, Vol. 20, No. 12, 24.11.2013, p. 1367-1376.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Dealing with pervasive transcription. / Jensen, Torben Heick; Jacquier, Alain; Libri, Domenico.
In: Molecular Cell, Vol. 52, No. 4, 21.11.2013, p. 473-484.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Mutational analysis of the yeast RNA helicase Sub2p reveals conserved domains required for growth, mRNA export, and genomic stability. / Saguez, Cyril; Zubiate, Fernando Alexis Gonzales; Schmid, Manfred et al.
In: RNA, Vol. 19, 20.08.2013, p. 1363-1371 .Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Polyadenylation site-induced decay of upstream transcripts enforces promoter directionality. / Ntini, Evgenia; Järvelin, Aino I; Bornholdt, Jette et al.
In: Nature Structural and Molecular Biology, Vol. 20, No. 8, 14.07.2013, p. 923-928.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Exonuclease hDIS3L2 specifies an exosome-independent 3'-5' degradation pathway of human cytoplasmic mRNA. / Lubas, Michal Szymon; Damgaard, Christian Kroun; Tomecki, Rafal et al.
In: E M B O Journal, Vol. 32, No. 13, 11.06.2013, p. 1855-1568.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
RNA decay machines : the exosome. / Chlebowski, Aleksander; Lubas, Michal Szymon; Jensen, Torben Heick et al.
In: BBA Gene Regulatory Mechanisms, Vol. 1829, No. 6-7, 06.2013, p. 552-560.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Transcription-associated quality control of mRNP. / Schmid, Manfred; Jensen, Torben Heick.
In: BBA General Subjects, Vol. 1829, No. 1, 01.2013, p. 158-168.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Making ends meet: Coordination between RNA 3'end processing and transcription initiation. / Andersen, Pia Kjølhede; Jensen, Torben Heick; Lykke-Andersen, Søren.
In: Wiley Interdisciplinary Reviews: RNA, Vol. 4, No. 3, 2013, p. 233-246.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Promoter proximal polyadenylation sites reduce transcription activity. / Andersen, Pia Kjølhede; Lykke-Andersen, Søren; Jensen, Torben Heick.
In: Genes & Development, Vol. 26, 01.10.2012, p. 2169-2179.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
MRN1 implicates chromatin remodeling complexes and architectural factors in mRNA maturation. / Düring, Louis; Thorsen, Michael; Petersen, Darima S. et al.
In: PLOS ONE, Vol. 7, No. 9, 18.09.2012.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Nuclear retention prevents premature cytoplasmic appearance of mRNA. / Kallehauge, Thomas Beuchert; Robert, Marie-Cécile ; Bertrand, Edouard et al.
In: Molecular Cell, Vol. 48, No. 1, 23.08.2012, p. 145-152.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Rrp6p controls mRNA poly(a) tail length and its decoration with poly(a) binding proteins. / Schmid, Manfred; Poulsen, Mathias Bach; Olszewski, Pawel et al.
In: Molecular Cell, Vol. 47, No. 2, 27.07.2012, p. 267-280.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Improved methodology for the affinity isolation of human protein complexes expressed at near endogenous levels. / Domanski, Michal; Molloy, Kelly; Jiang, Hua et al.
In: BioTechniques, Vol. 0, No. 0, 05.2012, p. 1-6.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Biochemistry and Function of the RNA Exosomes. / Lubas, Michal Szymon; Chlebowski , Aleksander; Dziembowski , Andrzej et al.
The Enzymes: Eukaryotic RNases and their Partners in RNA Degradation and Biogenesis, Part A. ed. / Guillaume F Chanfreau; Fuyuhiko Tamanoi. Vol. 31 Elsevier, 2012. p. 1-30 (The Enzymes).Research output: Contribution to book/anthology/report/proceeding › Book chapter › Research › peer-review
Saccharomyces cerevisiae Ngl3p is an active 3′–5′ exonuclease with a specificity towards poly-A RNA reminiscent of cellular deadenylases. / Feddersen, Ane; Dedic, Emil; Poulsen, Esben Guldahl et al.
In: Nucleic Acids Research, Vol. 40, No. 2, 2012, p. 837-846.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
mRNP quality control goes regulatory. / Mühlemann, Oliver; Jensen, Torben Heick.
In: Trends in Genetics, Vol. 28, No. 2, 2012, p. 70-77.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Implication of Ccr4-Not complex function in mRNA quality control in Saccharomyces cerevisiae. / Assenholt, Jannie; Mouaikel, John; Saguez, Cyril et al.
In: RNA, Vol. 17, No. 10, 01.10.2011, p. 1788-1794.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Biogenic mechanisms and utilization of small RNAs derived from human protein-coding genes. / Valen, Eivind; Preker, Pascal; Andersen, Peter Refsing et al.
In: Nature Structural and Molecular Biology, Vol. 18, No. 9, 01.09.2011, p. 1075-82.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The Nuclear EXosome Targeting (NEXT) complex - a new player in RNA surveillance in human cells. / Lubas, Michal Szymon; Christensen, Marianne Skovgaard; Kristiansen, Maiken Søndergaard et al.
2011. Abstract from RNA 2011, Kyoto, Japan.Research output: Contribution to conference › Conference abstract for conference › Research
The Putative Non-canonical Human Poly(A) polymerase hTrf4-2 is Found in Nuclear Exosome Preparations and interacts with RNA Splicing and snoRNA processing factors. / Christensen, Marianne Skovgaard; Lubas, Michal Szymon; Kristiansen, Maiken Søndergaard et al.
2011. Abstract from RNA 2011, Kyoto, Japan.Research output: Contribution to conference › Conference abstract for conference › Research
Depletion of the RNA exosome triggers hypermethylation of human promoters. / Mapendano, Christophe Kamungu; Preker, Pascal; Villesen, P et al.
2011. Abstract from Third EMBO meeting on 'Chromatin and Epigenetics, Heidelberg, Germany.Research output: Contribution to conference › Conference abstract for conference › Research
Identification of novel RNA degradation pathways in human cells. RNA 2011 meeting, Kyoto, Japan 14-18 June. / Lubas, Michal Szymon; Christensen, Marianne Skovgaard; Falkenby , L et al.
2011.Research output: Contribution to conference › Conference abstract for conference › Research
Small RNA profiles from human genic regions suggest biogenic mechanisms and identify new putative regulatory molecules. RNA 2011 meeting, Kyoto, Japan 14-18 June. / Valen, E; Preker, Pascal; Andersen , PR et al.
2011.Research output: Contribution to conference › Conference abstract for conference › Research
PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters. / Preker, Pascal; Almvig, Kristina; Christensen, Marianne Skovgaard et al.
In: Nucleic Acids Research, 19.05.2011.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Uncovering layers of human RNA polymerase II transcription. / Jensen, Torben Heick.
2011. Abstract from Mosbacher Kolloquium, Baden, Germany.Research output: Contribution to conference › Conference abstract for conference › Research
An ending is a new beginning: Transcription termination supports re-initiation. / Lykke-Andersen, Søren; Mapendano, Christophe K; Jensen, Torben Heick.
In: Cell Cycle, Vol. 10, No. 6, 15.03.2011, p. 863-865.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The eukaryotic RNA exosome: Same scaffold but variable catalytic subunits. / Lykke-Andersen, Søren; Tomecki, Rafal; Jensen, Torben Heick et al.
In: RNA Biology, Vol. 8, No. 1, 01.01.2011.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Interaction Profiling Identifies the Human Nuclear Exosome Targeting Complex. / Lubas, Michal Szymon; Christensen, Marianne Skovgaard; Kristiansen, Maiken Søndergaard et al.
In: Molecular Cell, 2011.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
T-body formation precedes virus-like particle maturation in S. cerevisiae. / Malagon, Francisco; Jensen, Torben Heick.
In: RNA Biology, Vol. 8, No. 2, 2011, p. 184-189.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
A pause to splice. / Andersen, Pia K; Jensen, Torben Heick.
In: Molecular Cell Biology Research Communications, Vol. 40, No. 4, 24.11.2010, p. 503-5.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Translation by remote control. / Preker, Pascal; Jensen, Torben Heick.
In: Cell, Vol. 143, No. 4, 12.11.2010, p. 501-2.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The yeast 5'-3' exonuclease Rat1p functions during transcription elongation by RNA polymerase II. / Jimeno-González, Silvia; Haaning, Line Lindegaard; Malagon, Francisco et al.
In: Molecular Cell Biology Research Communications, Vol. 37, No. 4, 26.02.2010, p. 580-7.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Characterization of a "TRAMP-like" co-factor of the human RNA exosome. / Christensen, Marianne Skovgaard; Kristiansen, Maiken Søndergaard; Lubas, Michal Szymon et al.
2010. Abstract from MoMeD Summer School 2010, Lund, Sweden.Research output: Contribution to conference › Conference abstract for conference › Research
Crosstalk between mRNA 3’ end processing and transcription initiation. / Mapendano, Christophe Kamungu; Lykke-Andersen, Søren; Kjems, Jørgen et al.
In: Molecular Cell, Vol. 40, 2010, p. 410-422.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
The human core exosome associates with differentially localized processive ribonucleases: hDIS3 and hDIS3L. / Tomecki, Rafal; Kristiansen, Maiken Søndergaard; Lykke-Andersen, Søren et al.
In: E M B O Journal, Vol. 29, No. 14, 2010, p. 2342-2357.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells. / Eberle, Andrea; Lykke-Andersen, Søren; Mühlemann, Oliver et al.
In: Nature Structural and Molecular Biology, Vol. 16, No. 1, 16.01.2009, p. 49-55.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review