Thomas Bataillon

Research output

Research output per year 1996 2004 2006 2007 2011 2012 2015 2016 2017 2018 2020 2021 2022 2024

• 88 Journal article
• 4 Letter
• 2 Book chapter
• 1 Contribution to newspaper - Newspaper article
• 2 More
  • 1 Review
  • 1 Preprint

Research output per year

Research output per year

Search results

• 2024

  FastDFE: Fast and Flexible Inference of the Distribution of Fitness Effects

  Sendrowski, J. & Bataillon, T., May 2024, In: Molecular Biology and Evolution. 41, 5, msae070.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • Python 100%
  • Pythonidae 100%
  • Scalable Inference 100%
  • Fast Inference 100%
  • Frequency Spectrum 100%
  2 Citations (Scopus)

• Identification of constrained sequence elements across 239 primate genomes

  Kuderna, L. F. K., Ulirsch, J. C., Rashid, S., Ameen, M., Sundaram, L., Hickey, G., Cox, A. J., Gao, H., Kumar, A., Aguet, F., Christmas, M. J., Clawson, H., Haeussler, M., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A. & Bergman, J. & 72 others, Rouselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A., Chuma, I. S., Horvath, J. E., Hvilsom, C., Juan, D., Frandsen, P., Schraiber, J. G., de Melo, F. R., Bertuol, F., Byrne, H., Sampaio, I., Farias, I., Valsecchi, J., Messias, M., da Silva, M. N. F., Trivedi, M., Rossi, R., Hrbek, T., Andriaholinirina, N., Rabarivola, C. J., Zaramody, A., Jolly, C. J., Phillips-Conroy, J., Wilkerson, G., Abee, C., Simmons, J. H., Fernandez-Duque, E., Kanthaswamy, S., Shiferaw, F., Wu, D., Zhou, L., Shao, Y., Zhang, G., Keyyu, J. D., Knauf, S., Le, M. D., Lizano, E., Merker, S., Navarro, A., Nadler, T., Khor, C. C., Lee, J., Tan, P., Lim, W. K., Kitchener, A. C., Zinner, D., Gut, I., Melin, A. D., Guschanski, K., Schierup, M. H., Beck, R. M. D., Karakikes, I., Wang, K. C., Umapathy, G., Roos, C., Boubli, J. P., Siepel, A., Kundaje, A., Paten, B., Lindblad-Toh, K., Rogers, J., Marques Bonet, T. & Farh, K. K. H., 25 Jan 2024, In: Nature. 625, 7996, p. 735-742 8 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • Regulatory Element 100%
  • Gene Expression 66%
  • Placental Mammal 66%
  • Noncoding DNA 66%
  • Genetic Divergence 33%
  16 Citations (Scopus)

• Natural variation in root exudate composition in the genetically structured Arabidopsis thaliana in the Iberian Peninsula

  Subrahmaniam, H. J., Pico, X., Bataillon, T., Salomonsen, C., Glasius, M. & Ehlers, B., 2024, (Accepted/In press) In: New Phytologist.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
• 2023

  A global catalog of whole-genome diversity from 233 primate species

  Kuderna, L. F. K., Gao, H., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J., Rousselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A. & Chuma, I. S. & 55 others, Horvath, J. E., Hvilsom, C., Juan, D., Frandsen, P., Schraiber, J. G., de Melo, F. R., Bertuol, F., Byrne, H., Sampaio, I., Farias, I., Valsecchi, J., Messias, M., da Silva, M. N. F., Trivedi, M., Rossi, R., Hrbek, T., Andriaholinirina, N., Rabarivola, C. J., Zaramody, A., Jolly, C. J., Phillips-Conroy, J., Wilkerson, G., Abee, C., Simmons, J. H., Fernandez-Duque, E., Kanthaswamy, S., Shiferaw, F., Wu, D., Zhou, L., Shao, Y., Zhang, G., Keyyu, J. D., Knauf, S., Le, M. D., Lizano, E., Merker, S., Navarro, A., Nadler, T., Khor, C. C., Lee, J., Tan, P., Lim, W. K., Kitchener, A. C., Zinner, D., Gut, I., Melin, A. D., Guschanski, K., Schierup, M. H., Beck, R. M. D., Umapathy, G., Roos, C., Boubli, J. P., Rogers, J., Farh, K. K. H. & Bonet, T. M., Jun 2023, In: Science. 380, 6648, p. 906-913 8 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Genetic Divergence 100%
  • Evolution 100%
  • Biological Phenomena and Functions Concerning the Entire Organism 100%
  • Missense Mutation 100%
  • Cladistics 100%
  56 Citations (Scopus)

• The landscape of tolerated genetic variation in humans and primates

  Gao, H., Hamp, T., Ede, J., Schraiber, J. G., McRae, J., Singer-Berk, M., Yang, Y., Dietrich, A. S. D., Fiziev, P. P., Kuderna, L. F. K., Sundaram, L., Wu, Y., Adhikari, A., Field, Y., Chen, C., Batzoglou, S., Aguet, F., Lemire, G., Reimers, R. & Balick, D. & 77 others, Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Manu, S., Valenzuela, A., Bergman, J., Rousselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A., Chuma, I. S., Horvath, J. E., Hvilsom, C., Juan, D., Frandsen, P., de Melo, F. R., Bertuol, F., Byrne, H., Sampaio, I., Farias, I., do Amaral, J. V., Messias, M., da Silva, M. N. F., Trivedi, M., Rossi, R., Hrbek, T., Andriaholinirina, N., Rabarivola, C. J., Zaramody, A., Jolly, C. J., Phillips-Conroy, J., Wilkerson, G., Abee, C., Simmons, J. H., Fernandez-Duque, E., Kanthaswamy, S., Shiferaw, F., Wu, D., Zhou, L., Shao, Y., Zhang, G., Keyyu, J. D., Knauf, S., Le, M. D., Lizano, E., Merker, S., Navarro, A., Bataillon, T., Nadler, T., Khor, C. C., Lee, J., Tan, P., Lim, W. K., Kitchener, A. C., Zinner, D., Gut, I., Melin, A., Guschanski, K., Schierup, M. H., Beck, R. M. D., Umapathy, G., Roos, C., Boubli, J. P., Lek, M., Sunyaev, S., O'Donnell-Luria, A., Rehm, H. L., Xu, J., Rogers, J., Marques-Bonet, T. & Farh, K. K. H., Jun 2023, In: Science (New York, N.Y.). 380, 6648, abn8197.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Genetic Divergence 100%
  • Genetic Disorder 100%
  • Human Genetics 100%
  • Genome Sequencing 100%
  • Genetic Variation 100%
  47 Citations (Scopus)
• 2022

  Competition and coevolution drive the evolution and the diversification of CRISPR immunity

  Guillemet, M., Chabas, H., Nicot, A., Gatchich, F., Ortega-Abboud, E., Buus, C., Hindhede, L., Rousseau, G. M., Bataillon, T., Moineau, S. & Gandon, S., Oct 2022, In: Nature Ecology & Evolution. 6, 10, p. 1480-1488 9 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Frequency Dependent Selection 100%
  • Intraspecific Competition 100%
  11 Citations (Scopus)

• Hunting for Beneficial Mutations: Conditioning on SIFT Scores When Estimating the Distribution of Fitness Effect of New Mutations

  Chen, J., Bataillon, T., Glémin, S. & Lascoux, M., 1 Jan 2022, In: Genome Biology and Evolution. 14, 1, evab151.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • New mutation 100%
  • Conditioning 100%
  • Beneficial Mutation 100%
  • Molecular Evolution 50%
  • Site-based 40%
  10 Citations (Scopus)

• What does the distribution of fitness effects of new mutations reflect? Insights from plants

  Chen, J., Bataillon, T., Glémin, S. & Lascoux, M., Feb 2022, In: New Phytologist. 233, 4, p. 1613-1619 7 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  File

  • Life History Trait 100%
  • Life History 100%
  • Mating System 50%
  • Molecular Evolution 50%
  7 Citations (Scopus)

  32 Downloads (Pure)
• 2021

  Dioecy Is Associated with High Genetic Diversity and Adaptation Rates in the Plant Genus Silene

  Muyle, A., Martin, H., Zemp, N., Mollion, M., Gallina, S., Tavares, R., Silva, A., Bataillon, T., Widmer, A., Glémin, S., Touzet, P. & Marais, G. A. B., 1 Mar 2021, In: Molecular Biology and Evolution. 38, 3, p. 805-818 14 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • RNA-Seq 100%
  • Phylogenetics 100%
  • Silene 100%
  32 Citations (Scopus)

• Ongoing decline in insect-pollinated plants across Danish grasslands

  Ehlers, B., Bataillon, T. & Damgaard, C., Nov 2021, In: Biology Letters. 17, 11, 5 p., 0210493.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • Nardus 100%
  12 Citations (Scopus)

• Recombination facilitates adaptive evolution in rhizobial soil bacteria

  Cavassim, M. I. A., Andersen, S. U., Bataillon, T. & Schierup, M. H., Dec 2021, In: Molecular Biology and Evolution. 38, 12, p. 5480-5490 11 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Soil Microflora 100%
  • Evolutionary Adaptation 100%
  • Adaptive Evolution 100%
  • Homologous Recombination 50%
  • Fixation Probability 40%
  8 Citations (Scopus)
• 2020

  Evolutionary genomics can improve prediction of species’ responses to climate change

  Waldvogel, A. M., Feldmeyer, B., Rolshausen, G., Exposito-Alonso, M., Rellstab, C., Kofler, R., Mock, T., Schmid, K., Schmitt, I., Bataillon, T., Savolainen, O., Bergland, A., Flatt, T., Guillaume, F. & Pfenninger, M., Feb 2020, In: Evolution Letters. 4, 1, p. 4-18 15 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • Evolution 100%
  • Climate Change 100%
  • Genetic Variability 16%
  • Population Size 16%
  • Phenotypic Plasticity 16%
  174 Citations (Scopus)

• Selective Sweeps Under Dominance and Inbreeding

  Hartfield, M. & Bataillon, T., 1 Mar 2020, In: G3 (Bethesda, Md.). 10, 3, p. 1063-1075 13 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • Inbreeding 100%
  • Selective Sweep 100%
  • Allele 100%
  • Self Fertilization 100%
  • Evolutionary Genetics 50%
  20 Citations (Scopus)

• Variation of the adaptive substitution rate between species and within genomes

  Moutinho, A. F., Bataillon, T. & Dutheil, J. Y., Jun 2020, In: Evolutionary Ecology. 34, 3, p. 315-338 24 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  File

  • Molecular Evolution 100%
  • Genetic Drift 50%
  • Gene Density 50%
  • Evolutionary Adaptation 50%
  • Gene Mutation 50%
  21 Citations (Scopus)

  30 Downloads (Pure)
• 2019

  Comparison of the Full Distribution of Fitness Effects of New Amino Acid Mutations Across Great Apes

  Castellano, D., Macià, M. C., Tataru, P., Bataillon, T. & Munch, K., 2019, In: Genetics. 213, 3, p. 953-966 14 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Amino Acids 100%
  • Gene Conversion 100%
  • Macaca 100%
  • Effective Population Size 100%
  • Neutral Gene Theory 100%
  23 Citations (Scopus)

• polyDFEv2.0: testing for invariance of the distribution of fitness effects within and across species

  Tataru, P. & Bataillon, T., Aug 2019, In: Bioinformatics (Oxford, England). 35, 16, p. 2868-2869 2 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Site Frequency Spectrum 100%
  • Spectra Data 66%
  • Fitness Effects of mutations 33%
  • Differences in Distributions 33%
  • Spurious Detections 33%
  23 Citations (Scopus)
• 2018

  Identifying Drivers of Parallel Evolution: A Regression Model Approach

  Bailey, S. F., Guo, Q. & Bataillon, T., 1 Oct 2018, In: Genome Biology and Evolution. 10, 10, p. 2801-2812 12 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  File

  • Prevalence 100%
  • Saccharomyces cerevisiae 100%
  • Mutation Rate 100%
  • Gene Mutation 100%
  • Protein Domain 100%
  15 Citations (Scopus)

  128 Downloads (Pure)

• Joint impact of competition, summer precipitation, and maternal effects on survival and reproduction in the perennial Hieracium umbellatum

  Ehlers, B., Holmstrup, M., Schmidt, I. K., Sørensen, J. G. & Bataillon, T., 1 Oct 2018, In: Evolutionary Ecology. 32, 5, p. 529-545 17 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  File

  • Perennials 100%
  • Hieracium umbellatum 100%
  • Maternal Effect 100%
  • Adaptive Response 100%
  • Evolution 50%
  6 Citations (Scopus)

  123 Downloads (Pure)

• Overestimation of the adaptive substitution rate in fluctuating populations

  Rousselle, M., Mollion, M., Nabholz, B., Bataillon, T. & Galtier, N., 18 Apr 2018, In: Biology Letters. 14, 5, 20180055.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access
  27 Citations (Scopus)

• Patterns of genome-wide nucleotide diversity in the gynodioecious plant Thymus vulgaris are compatible with recent sweeps of cytoplasmic genes

  Mollion, M., Ehlers, B., Figuet, E., Santoni, S., Lenormand, T., Maurice, S., Galtier, N. & Bataillon, T., Jan 2018, In: Genome Biology and Evolution. 10, 1, p. 239-248 10 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  File

  • Thymus (Plant) 100%
  7 Citations (Scopus)

  166 Downloads (Pure)

• The fitness landscape of the codon space across environments

  Fragata, I., Matuszewski, S., Schmitz, M. A., Bataillon, T., Jensen, J. D. & Bank, C., 1 Nov 2018, In: Heredity. 121, 5, p. 422-437 16 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • Codon 100%
  • Dynamics 25%
  • Saccharomyces cerevisiae 25%
  14 Citations (Scopus)
• 2017

  Inference of distribution of fitness effects and proportion of adaptive substitutions from polymorphism data

  Tataru, P., Mollion, M., Glémin, S. & Bataillon, T., 1 Nov 2017, In: Genetics. 207, 3, p. 1103-1119 17 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Evolutionary Genetics 100%
  • Exome 100%
  • Molecular Evolution 100%
  • Beneficial Mutation 100%
  • Frequency Spectrum 100%
  89 Citations (Scopus)

• Microbial community assembly and evolution in subseafloor sediment

  Starnawski, P., Bataillon, T., Ettema, T. J. G., Jochum, L. M., Schreiber, L., Chen, X., Lever, M. A., Polz, M. F., Jørgensen, B. B., Schramm, A. & Kjeldsen, K. U., 14 Mar 2017, In: Proceedings of the National Academy of Sciences (PNAS). 114, 11, p. 2940-2945 6 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Surface Property 100%
  • Lineages 50%
  • Metagenomics 50%
  • Evolutionary Adaptation 50%
  • Archaeon 50%
  156 Citations (Scopus)

• Statistical Inference in the Wright–Fisher Model Using Allele Frequency Data

  Tataru, P., Simonsen, M., Bataillon, T. & Hobolth, A., 2017, In: Systematic Biology. 66, 1, p. e30-e46

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Statistical Inference 100%
  • Allele Frequency 100%
  • Gene Frequency 100%
  • Computational Accuracy 100%
  • Wright-Fisher Model 50%
  50 Citations (Scopus)

• The Evolutionary Interplay between Adaptation and Self-Fertilization

  Hartfield, M., Bataillon, T. & Glemin, S., Jun 2017, In: Trends in Genetics. 33, 6, p. 420-431 12 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Self-fertilization 100%
  • Reproductive System 100%
  • Demographic History 20%
  • Inferring Attributes 20%
  • Polygenic Adaptation 20%
  50 Citations (Scopus)

• What drives parallel evolution? How population size and mutational variation contribute to repeated evolution

  Bailey, S. F., Blanquart, F., Bataillon, T. & Kassen, R., 1 Jan 2017, In: BioEssays. 39, 1, p. 1-9 9 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Population Size 100%
  • Genotyping 50%
  • Mutation Rate 50%
  74 Citations (Scopus)
• 2016

  A replicated climate change field experiment reveals rapid evolutionary response in an ecologically important soil invertebrate

  Bataillon, T., Galtier, N., Bernard, A., Cryer, N. H. K., Faivre, N., Santoni, S., Severac, D., Mikkelsen, T., Larsen, K., Beier, C., Sørensen, J. G., Holmstrup, M. & Ehlers, B., 1 Jul 2016, In: Global Change Biology. 22, 7, p. 2370-2379 10 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  Open Access

  • Genetics 100%
  • Genetic Polymorphism 100%
  • Genome Sequencing 100%
  • Soil Invertebrate 100%
  • Gene Frequency 100%
  15 Citations (Scopus)

• Epistasis and the Structure of Fitness Landscapes: Are Experimental Fitness Landscapes Compatible with Fisher's Geometric Model?

  Blanquart, F. & Bataillon, T., Jun 2016, In: Genetics. 203, 2, p. 847-862 37 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Goodness of Fit Test 100%
  31 Citations (Scopus)

• Heterogeneity of effective population size and its implications in conservation genetics and animal breeding

  Jimenez Mena, B., Hospital, F. & Bataillon, T., 1 Mar 2016, In: Conservation Genetics Resources. 8, 1, p. 35-41 7 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Genetic Drift 100%
  • Conservation Genetics 100%
  • Breeding 100%
  • Effective Population Size 100%
  • Genetic Divergence 25%
  16 Citations (Scopus)

• One size fits all? Direct evidence for the heterogeneity of genetic drift throughout the genome.

  Jimenez Mena, B., Tataru, P., Brøndum, R. F., Sahana, G., Guldbrandtsen, B. & Bataillon, T., 1 Jul 2016, In: Biology Letters. 12, 7, 20160426.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Genetic Drift 100%
  • Autosome 66%
  • Inbreeding 33%
  • Conservation Genetics 33%
  • Population Genetics 33%
  7 Citations (Scopus)
• 2015

  Can the experimental evolution programme help us elucidate the genetic basis of adaptation in nature?

  Bailey, S. & Bataillon, T., 2015, In: Molecular Ecology.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Genetics 100%
  • Natural Population 100%
  • Time Series Data 100%
  • Experimental Result 100%
  • Evolutionary Adaptation 100%
  57 Citations (Scopus)

• GC-Content evolution in bacterial genomes: the biased gene conversion hypothesis expands

  Lassalle, F., Périan, S., Bataillon, T., Nesme, X., Duret, L. & Daubin, V., Feb 2015, In: P L o S Genetics. 11, 2, p. e1004941

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
  150 Citations (Scopus)

• Inference of purifying and positive selection in three subspecies of chimpanzees (Pan troglodytes) from exome sequencing

  Bataillon, T., Duan, J., Hvilsom, C., Jin, X., Li, Y., Skov, L., Glemin, S., Munch, K., Jiang, T., Qian, Y., Hobolth, A., Wang, J., Mailund, T., Siegismund, H. R. & Schierup, M. H., Apr 2015, In: Genome Biology and Evolution. 7, 4, p. 1122-32 11 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Negative Selection (Natural Selection) 100%
  • Indel 100%
  • Exome Sequencing 100%
  • Pan Troglodytes 100%
  • Gene Flow 66%
  24 Citations (Scopus)

• Inference Under a Wright-Fisher Model Using an Accurate Beta Approximation

  Tataru, P., Bataillon, T. & Hobolth, A., Nov 2015, In: Genetics. 201, 3, p. 1133-1141

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Allele Frequency 100%
  • Stochastic Behavior 50%
  • Behavior (Neuroscience) 20%
  18 Citations (Scopus)
• 2014

  Effects of new mutations on fitness: insights from models and data

  Bataillon, T. & Bailey, S. F., Jul 2014, In: New York Academy of Sciences. Annals. 1320, 1, p. 76-92 17 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Mutation Rate 100%
  • Pleiotropy 100%
  • Initial Level 50%
  63 Citations (Scopus)
• 2013

  As it happens: current directions in experimental evolution

  Bataillon, T., Joyce, P. & Sniegowski, P., 2013, In: Biology Letters. 9, 1, 20120945.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Genetics 100%
  • Gene Mutation 100%
  11 Citations (Scopus)

• Selection, genome-wide fitness effects and evolutionary rates in the model legume Medicago truncatula

  Paape, T., Bataillon, T., Zhou, P., J Y Kono, T., Briskine, R., Young, N. D. & Tiffin, P., 2013, In: Molecular Ecology. 22, 13, p. 3525-3538

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Medicago 100%
  • Evolutionary Rate 100%
  • Negative Selection (Natural Selection) 50%
  • RNA Sequencing 25%
  42 Citations (Scopus)

• Soil microarthropods are only weakly impacted after 13 years of repeated drought treatment in wet and dry heathland soils

  Holmstrup, M., Sørensen, J. G., Schmidt, I. K., Nielsen, P. L., Mason, S., Tietema, A., Smith, A. R., Bataillon, T., Beier, C. & Ehlers, B. K., 2013, In: Soil Biology & Biochemistry. 66, p. 110-118

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
  43 Citations (Scopus)
• 2012

  A population genomics perspective on the emergence and adaptation of new plant pathogens in agro-ecosystems

  Stukenbrock, E. H. & Bataillon, T., 2012, In: P L o S Pathogens. 8, 9, p. e1002893

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
  62 Citations (Scopus)

• Contrasted patterns of selective pressure in three recent paralogous gene pairs in the Medicago genus (L.)

  Ho-Huu, J., Ronfort, J., De Mita, S., Bataillon, T., Hochu, I., Weber, A. & Chantret, N., 2012, In: B M C Evolutionary Biology. 12, p. 195 13 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Polygalacturonase 100%
  14 Citations (Scopus)

• Extensive X-linked adaptive evolution in central chimpanzees

  Hvilsom, C., Qian, Y., Bataillon, T., Li, Y., Mailund, T., Sallé, B., Carlsen, F., Li, R., Zheng, H., Jiang, T., Jiang, H., Jin, X., Munch, K., Hobolth, A., Siegismund, H. R., Wang, J. & Schierup, M. H., 2012, In: Proceedings of the National Academy of Sciences (PNAS).

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • X Chromosome 100%
  • Evolutionary Adaptation 100%
  • Autosome 66%
  • Negative Selection (Natural Selection) 50%
  • Amino Acid Substitution 33%
  64 Citations (Scopus)

• Increased frequency of drought depletes species richness of enchytraeid communities in both wet and dry heathland soils

  Holmstrup, M., Sørensen, J. G., Maraldo, K., Schmidt, I., Tietema, A., Smith, A., Schmelz, R., Bataillon, T. & Ehlers, B., 2012, In: Soil Biology & Biochemistry. 53, p. 43-49

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
  15 Citations (Scopus)

• Increased frequency of drought reduces species richness of enchytraeid communities in both wet and dry heathland soils

  Holmstrup, M., Sørensen, J. G., Maraldo, K., Schmidt, I. K., Mason, S., Tietema, A., Smith, A. R., Emmett, B., Schmelz, R., Bataillon, T., Beier, C. & Ehlers, B. K., 2012, In: Soil Biology & Biochemistry. 53, p. 43-49

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
  16 Citations (Scopus)

• "Ménage à trois": the presence/absence of thyme shapes the mutualistic interaction between the host plant Medicago truncatula (Fabaceae) and its symbiotic bacterium Sinorhizobium meliloti

  Ehlers, B. K., Grøndahl, E., Ronfort, J. & Bataillon, T., 2012, In: Ecology and Evolution. 2, 7, p. 1676-81 6 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Genetic Correlation 100%
  • Host Plant 100%
  • Fabaceae 100%
  • Thyme 100%
  • Mutualism 100%
  7 Citations (Scopus)

• Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms

  Kjeldsen, K. U., Bataillon, T., Pinel, N., De Mita, S., Lund, M. B., Panitz, F., Bendixen, C., Stahl, D. A. & Schramm, A., 2012, In: Genome Biology and Evolution. 4, 3, p. 307-315 9 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Purifying Selection 100%
  • Codon Usage Bias 40%
  • DNA Metabolism 20%
  • Acidovorax 20%
  21 Citations (Scopus)

• “Ménage a trois”: Can the presence/absence of thyme shape the mutualistic interaction between Medicago truncatula and Sinorhizobium meliloti?

  Ehlers, B., Grøndahl, E., Ronfort, J. & Bataillon, T., 2012, In: Ecology and Evolution. 7, p. 1676-1681 7.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
• 2011

  Cost of Adaptation and Fitness Effects of Beneficial Mutations in Pseudomonas fluorescens

  Bataillon, T., Zhang, T. & Kassen, R., 25 Aug 2011, In: Genetics. 189, 3, p. 939-949 11 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Pseudomonas fluorescens 100%
  • Ecological Specialization 50%
  55 Citations (Scopus)

• Genomic determinants of protein evolution and polymorphism in Arabidopsis

  Slotte, T., Bataillon, T., Hansen, T. T., St Onge, K., Wright, S. I. & Schierup, M. H., 16 Sept 2011, In: Genome Biology and Evolution. 3, p. 1210-1219

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Arabidopsis 100%
  • Mutation Rate 100%
  • Negative Selection (Natural Selection) 50%
  • Abiotic Stress 50%
  • Taxon 50%
  72 Citations (Scopus)

• Molecular adaptation in flowering and symbiotic recognition pathways: insights from patterns of polymorphism in the legume Medicago truncatula

  De Mita, S., Chantret, N., Loridon, K., Ronfort, J. & Bataillon, T., 1 Jan 2011, In: B M C Evolutionary Biology. 11, 1, p. 229-241 13 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Medicago 100%
  16 Citations (Scopus)

• Molecular footprints of local adaptation in two Mediterranean conifers

  Grivet, D., Sebastiani, F., Alía, R., Bataillon, T., Torre, S., Zabal-Aguirre, M., Vendramin, G. G. & González-Martínez, S. C., 1 Jan 2011, In: Molecular Biology and Evolution. 28, 1, p. 101-16 16 p.

  Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review

  • Amplicon 100%
  • Local Adaptation 100%
  • Pine 100%
  • Temporal Scale 100%
  • Pinus pinaster 100%
  109 Citations (Scopus)