Aarhus University Seal / Aarhus Universitets segl

Stig Uggerhøj Andersen

  1. 2021
  2. Published

    MAUI-seq: Metabarcoding using amplicons with unique molecular identifiers to improve error correction. / Fields, Bryden; Moeskjaer, Sara; Friman, Ville-Petri; Andersen, Stig U; Young, J Peter W.

    In: Molecular Ecology Resources, Vol. 21, No. 3, 04.2021, p. 703-720.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  3. E-pub ahead of print

    Natural variation identifies a Pxy gene controlling vascular organization and formation of nodules and lateral roots in Lotus japonicus. / Kawaharada, Yasuyuki; Sandal, Niels; Gupta, Vikas; Jin, Haojie; Kawaharada, Maya; Taniuchi, Makoto; Ruman, Hafijur; Nadzieja, Marcin; Andersen, Kasper R; Schneeberger, Korbinian; Stougaard, Jens; Andersen, Stig U.

    In: New Phytologist, 23.03.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. Published

    Lotus japonicus Nuclear Factor YA1, a nodule emergence stage-specific regulator of auxin signalling. / Shrestha, Arina; Zhong, Sihui; Therrien, Jasmine; Huebert, Terry; Sato, Shusei; Mun, Terry; Andersen, Stig U; Stougaard, Jens; Lepage, Agnes; Niebel, Andreas; Ross, Loretta; Szczyglowski, Krzysztof.

    In: New Phytologist, Vol. 229, No. 3, 02.2021, p. 1535-1552.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  5. Published

    Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). / Andersen, Stig U; Chakraborty, Tapas; Chen, Wei; Chen, Xin-Ming; Chen, Yan; Hansen, Malene; Huang, Kun; Hubner, Christian A; Jensen, Thomas E; Jessen, Niels; Kaufmann, Stefan H E; Lee, Joo-Yong; Li, Bin; Li, Jing; Li, Jiong; Li, Qing; Li, Yuan; Lindner, Paula; Liu, Wei; Lund, Anders H; Martin, Sara; Mogensen, Trine H; Møller, Andreas Buch; Neri, Luca M; Petersen, Morten; Post, Martin; Wang, Chen; Wang, Hao; Wang, Qing; Wang, Qing; Wang, Qing; Wang, Yan; Wang, Yu; Wang, Zhe; Wu, Min; Wu, Yao-Wen; Yang, Hui; Yang, Ling; Yang, Qian; Zhang, Hong; Zhang, Hong; Zhang, Lin; Zhang, Lu; Zhang, Peng; Zhang, Xiaoyan; Zhang, Yang; Zhang, Yuan-Yuan; Zhang, Zhe; Zhang, Zili; Zhou, Hao; Zong, Wei-Xing.

    In: Autophagy, Vol. 17, No. 1, 02.2021, p. 1-382.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  6. 2020
  7. Published

    Greenotyper: Image-based plant phenotyping using distributed computing and deep learning. / Tausen, Marni; Clausen, Marc Mathias; Moeskjær, Sara; Shihavuddin, ASM; Dahl, Anders Bjorholm; Janss, Luc; Andersen, Stig Uggerhøj.

    In: Frontiers in Plant Science, Vol. 11, 1181, 08.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  8. Published

    Insights into the evolution of symbiosis gene copy number and distribution from a chromosome-scale Lotus japonicus Gifu genome sequence. / Kamal, Nadia; Mun, Terry; Reid, Dugald; Lin, Jie-Shun; Akyol, Turgut Yigit; Sandal, Niels; Asp, Torben; Hirakawa, Hideki; Stougaard, Jens; Mayer, Klaus F X; Sato, Shusei; Andersen, Stig Uggerhøj.

    In: D N A Research, Vol. 27, No. 3, dsaa015, 07.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  9. Published

    Symbiosis genes show a unique pattern of introgression and selection within a Rhizobium leguminosarum species complex. / Cavassim, Maria Izabel A; Moeskjær, Sara; Moslemi, Camous; Fields, Bryden; Bachmann, Asger; Vilhjálmsson, Bjarni J; Schierup, Mikkel Heide; W Young, J Peter; Andersen, Stig U.

    In: Microbial Genomics, Vol. 6, No. 4, 04.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  10. Published

    Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan. / Shah, Niraj; Wakabayashi, Tomomi; Kawamura, Yasuko; Skovbjerg, Cathrine Kiel; Wang, Ming-Zhuo; Mustamin, Yusdar; Isomura, Yoshiko; Gupta, Vikas; Jin, Haojie; Mun, Terry; Sandal, Niels; Azuma, Fuyuki; Fukai, Eigo; Seren, Ümit; Kusakabe, Shohei; Kikuchi, Yuki; Nitanda, Shogo; Kumaki, Takashi; Hashiguchi, Masatsugu; Tanaka, Hidenori; Hayashi, Atsushi; Sønderkær, Mads; Nielsen, Kaare Lehmann; Schneeberger, Korbinian; Vilhjalmsson, Bjarni; Akashi, Ryo; Stougaard, Jens; Sato, Shusei; Schierup, Mikkel Heide; Andersen, Stig Uggerhøj.

    In: Nature Communications, Vol. 11, No. 1, 253, 2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  11. 2019
  12. Published

    Identification of novel genes involved in phosphate accumulation in Lotus japonicus through Genome Wide Association mapping of root system architecture and anion content. / Giovannetti, Marco; Göschl, Christian; Dietzen, Christof; Andersen, Stig U; Kopriva, Stanislav; Busch, Wolfgang.

    In: PLOS Genetics, Vol. 15, No. 12, e1008126, 12.2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  13. Published

    Atypical Receptor Kinase RINRK1 Required for Rhizobial Infection but not Nodule Development in Lotus japonicus. / Li, Xiaolin; Zheng, Zhiqiong; Kong, Xiangxiao; Xu, Ji; Qiu, Liping; Sun, Jongho; Reid, Dugald Elgin; Jin, Haojie; Andersen, Stig U; Oldroyd, Giles E D; Stougaard, Jens; Downie, J Allan; Xie, Fang.

    In: Plant Physiology, Vol. 181, No. 2, 10.2019, p. 804-816.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  14. Published

    Eliminating vicine and convicine, the main anti-nutritional factors restricting faba bean usage. / Khazaei, H.; Purves, Randy W.; Hughes, J.; Link, Wolfgang; O'Sullivan, Donal M.; Schulman, Alan H.; Björnsdotter, Emilie; Geu-Flores, Fernando; Nadzieja, Marcin; Andersen, Stig U.; Stougaard, Jens; Vandenberg, Albert; Stoddard, Frederick L.

    In: Trends in Food Science and Technology, Vol. 91, 01.09.2019, p. 549-556.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearch

  15. Published

    Breaking Free : The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover. / Griffiths, Andrew G.; Moraga, Roger; Tausen, Marni; Gupta, Vikas; Bilton, Timothy P.; Campbell, Matthew A.; Ashby, Rachael; Nagy, Istvan; Khan, Anar; Larking, Anna; Anderson, Craig; Franzmayr, Benjamin; Hancock, Kerry; Scott, Alicia; Ellison, Nick W.; Cox, Murray P.; Asp, Torben; Mailund, Thomas; Schierup, Mikkel H.; Andersen, Stig Uggerhøj.

    In: The Plant Cell, Vol. 31, No. 7, 07.2019, p. 1466-1487.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  16. Published

    Large expert-curated database for benchmarking document similarity detection in biomedical literature search. / Brown, Peter; RELISH Consortium; Zhou, Yaoqi.

    In: Database, Vol. 2019, 085, 2019, p. 1-67.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  17. 2018
  18. Published

    Editorial : Molecular and cellular mechanisms of the legume-rhizobia symbiosis. / Wang, Jianping; Andersen, Stig Uggerhøj; Ratet, Pascal.

    In: Frontiers in Plant Science, Vol. 9, 1839, 12.12.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperEditorialpeer-review

  19. Published

    A plant chitinase controls cortical infection thread progression and nitrogen-fixing symbiosis. / Malolepszy, Anna; Kelly, Simon; Sørensen, Kasper Kildegaard; James, Euan Kevin; Kalisch, Christina; Bozsoki, Zoltan; Panting, Michael; Andersen, Stig U; Sato, Shusei; Tao, Ke; Jensen, Dorthe Bødker; Vinther, Maria; Jong, Noor de; Madsen, Lene Heegaard; Umehara, Yosuke; Gysel, Kira; Berentsen, Mette U; Blaise, Michael; Jensen, Knud Jørgen; Thygesen, Mikkel B; Sandal, Niels; Andersen, Kasper Røjkjær; Radutoiu, Simona.

    In: eLife, Vol. 7, 38874, 10.2018, p. 1-17.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. Published

    Distinct Lotus japonicus Transcriptomic Responses to a Spectrum of Bacteria Ranging From Symbiotic to Pathogenic. / Kelly, Simon; Mun, Terry; Stougaard, Jens; Ben, Cécile; Andersen, Stig U.

    In: Frontiers in Plant Science, Vol. 9, 20.08.2018, p. 1218.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  21. Published

    Lotus japonicus Genetic, Mutant, and Germplasm Resources. / Hashiguchi, Masatsugu; Tanaka, Hidenori; Muguerza, Melody; Akashi, Ryo; Sandal, Niels Nørgaard; Andersen, Stig Uggerhøj; Sato, Shusei.

    In: Current protocols in plant biology, Vol. 3, No. 2, e20070, 06.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  22. Published

    Lotus japonicus NOOT-BOP-COCH-LIKE1 is essential for nodule, nectary, leaf and flower development. / Magne, Kévin; George, Jeoffrey; Berbel Tornero, Ana; Broquet, Blandine; Madueño, Francisco; Andersen, Stig Uggerhøj; Ratet, Pascal.

    In: Plant Journal, Vol. 94, 06.2018, p. 880-894.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  23. Published

    Dynamics of ethylene production in response to compatible Nod factor. / Reid, Dugald; Liu, Huijun; Kelly, Simon; Kawaharada, Yasuyuki; Mun, Terry; Andersen, Stig Uggerhøj; Desbrosses, Guilhem; Stougaard, Jens.

    In: Plant Physiology, Vol. 176, No. 2, 01.02.2018, p. 1764-1772.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  24. Published

    The Brassicaceae family displays divergent, shoot-skewed NLR resistance gene expression. / Munch, David; Gupta, Vikas; Bachmann, Asger; Busch, Wolfgang; Kelly, Simon; Mun, Terry; Andersen, Stig U.

    In: Plant Physiology, Vol. 176, No. 2, 02.2018, p. 1598-1609.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  25. 2017
  26. Published

    User Guide for the LORE1 Insertion Mutant Resource. / Mun, Terry; Malolepszy, Anna; Sandal, Niels; Stougaard, Jens; Andersen, Stig U.

    Plant Genomics. Methods in Molecular Biology. Vol. 1610 Humana Press, 2017. p. 13-23 (Methods in molecular biology (Clifton, N.J.)).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearch

  27. 2016
  28. Published

    Lotus Base : An integrated information portal for the model legume Lotus japonicus. / Mun, Terry; Bachmann, Asger; Gupta, Vikas; Stougaard, Jens; Andersen, Stig Uggerhøj.

    In: Scientific Reports, Vol. 6, 39447, 23.12.2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  29. Published

    Sinorhizobium fredii HH103 invades lotus burttii by crack entry in a nod factor-and surface polysaccharide-dependent manner. / Acosta-Jurado, Sebastián; Rodríguez-Navarro, Dulce Nombre; Kawaharada, Yasuyuki; Perea, Juan Fernández; Gil-Serrano, Antonio; Jin, Haojie; An, Qi; Rodríguez-Carvajal, Miguel A.; Andersen, Stig U.; Sandal, Niels; Stougaard, Jens; Vinardell, José María; Ruiz-Sainz, José E.

    In: Molecular Plant - Microbe Interactions, Vol. 29, No. 12, 01.12.2016, p. 925-937.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  30. Published

    The LORE1 insertion mutant resource. / Malolepszy, Anna; Mun, Terry; Sandal, Niels; Gupta, Vikas; Dubin, Manu; Urbanski, Dorian Fabian; Shah, Niraj; Bachmann, Asger; Fukai, Eigo; Hirakawa, Hideki; Tabata, Satoshi; Nadzieja, Marcin; Markmann, Katharina; Su, Junyi; Umehara, Yosuke; Soyano, Takashi; Miyahara, Akira; Sato, Shusei; Hayashi, Makoto; Stougaard, Jens; Andersen, Stig Uggerhøj.

    In: The Plant Journal, Vol. 88, No. 2, 27.09.2016, p. 306-317.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  31. Published

    High-resolution genetic maps of Lotus japonicus and L. burttii based on re-sequencing of recombinant inbred lines. / Shah, Niraj; Hirakawa, Hideki; Kusakabe, Shohei; Sandal, Niels; Stougaard, Jens; Schierup, Mikkel Heide; Sato, Shusei; Andersen, Stig Uggerhøj.

    In: D N A Research, Vol. 23, No. 5, 03.07.2016, p. 487-495.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  32. 2015
  33. Published

    SKI2 mediates degradation of RISC 5'-cleavage fragments and prevents secondary siRNA production from miRNA targets in Arabidopsis. / Branscheid, Anja; Marchais, Antonin; Schott, Gregory; Lange, Heike; Gagliardi, Dominique; Andersen, Stig Uggerhøj; Voinnet, Olivier; Brodersen, Peter.

    In: Nucleic Acids Research, Vol. 43, No. 22, 15.12.2015, p. 10975-10988.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  34. Published

    micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules. / Holt, Dennis B; Gupta, Vikas; Meyer, Dörte; Abel, Nikolaj B; Andersen, Stig Uggerhøj; Stougaard, Jens; Markmann, Katharina.

    In: New Phytologist, Vol. 208, No. 1, 10.2015, p. 241-256.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  35. Published

    Receptor-mediated exopolysaccharide perception controls bacterial infection. / Kawaharada, Y; Kelly, S; Nielsen, M Wibroe; Hjuler, C T; Gysel, K; Muszyński, A; Carlson, R W; Thygesen, M B; Sandal, N; Asmussen, M H; Vinther, M; Andersen, S U; Krusell, L; Thirup, S; Jensen, K J; Ronson, C W; Blaise, M; Radutoiu, S; Stougaard, J.

    In: Nature, Vol. 523, 16.07.2015, p. 308-312.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  36. Published

    The deubiquitinating enzyme AMSH1 is required for rhizobial infection and nodule organogenesis in Lotus japonicus. / Malolepszy, Anna; Urbański, Dorian Fabian; James, Euan K; Sandal, Niels; Isono, Erika; Stougaard, Jens; Andersen, Stig Uggerhøj.

    In: Plant Journal, Vol. 83, No. 4, 28.06.2015, p. 719-731.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  37. Published

    Naturally occurring diversity helps to reveal genes of adaptive importance in legumes. / Gentzbittel, Laurent; Andersen, Stig Uggerhøj; Ben, Cécile; Rickauer, Martina; Stougaard, Jens; Young, Nevin D.

    In: Frontiers in Plant Science, Vol. 6, No. 269, 269, 21.04.2015, p. 1-8.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  38. Published

    Legume recognition of rhizobia. / Kawaharada, Yasuyuki; Kelly, Simon; Malolepszy, Anna; Andersen, Stig Uggerhøj; Füchtbauer, Winnie Sophie; Rasmussen, Sheena Ricafranca; Mun, Terry; Sandal, Niels Nørgaard; Radutoiu, Simona; Madsen, Lene Heegaard; Stougaard, Jens.

    In: Legume Perspectives, No. 7, 04.2015, p. 16-18.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleCommissioned

  39. Published

    RNA-Seq analysis and annotation of a draft blueberry genome assembly identifies candidate genes involved in fruit ripening, biosynthesis of bioactive compounds, and stage-specific alternative splicing. / Gupta, Vikas; Estrada, April D; Blakley, Ivory; Reid, Rob; Patel, Ketan; Meyer, Mason D; Andersen, Stig Uggerhøj; Brown, Allan F; Lila, Mary Ann; Loraine, Ann E.

    In: GigaScience, Vol. 4, No. 5, 02.2015, p. 1-22.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  40. Published

    Chromosomal regions associated with the in vitro culture response of wheat (Triticum aestivum L.) microspores. / Nielsen, Nanna H.; Andersen, Stig U.; Stougaard, Jens; Jensen, Anni; Backes, Gunter; Jahoor, Ahmed.

    In: Plant Breeding, Vol. 134, No. 3, 2015, p. 255-263.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  41. 2014
  42. Published

    Legume and Lotus japonicus Databases. / Hirakawa, Hideki; Mun, Terry; Sato, Shusei; Andersen, Stig Uggerhøj.

    The Lotus japonicus Genome. ed. / Satoshi Tabata; Jens Stougaard. Springer, 2014. p. 259-267 (Compendium of Plant Genomes).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearch

  43. Published

    Forward and reverse genetics: The LORE1 retrotransposon insertion mutants. / Fukai, Eigo; Malolepszy, Anna; Sandal, Niels Nørgaard; Hayashi, Makoto; Andersen, Stig Uggerhøj.

    The Lotus japonicus Genome. ed. / Satoshi Tabata; Jens Stougaard. Springer, 2014. p. 221-227 (Compendium of Plant Genomes).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearch

  44. Published

    Genome Sequencing. / Sato, Shusei; Andersen, Stig Uggerhøj.

    The Lotus japonicus Genome. ed. / Satoshi Tabata; Jens Stougaard. Springer, 2014. p. 35-40 (Compendium of Plant Genomes).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearch

  45. Published

    Lotus japonicus SUNERGOS1 encodes a predicted subunit A of a DNA topoisomerase VI and is required for nodule differentiation and accommodation of rhizobial infection. / Yoon, Hwi Joong; Hossain, Md Shakhawat; Held, Mark; Hou, Hongwei; Kehl, Marilyn; Tromas, Alexandre; Sato, Shusei; Tabata, Satoshi; Andersen, Stig Uggerhøj; Stougaard, Jens; Ross, Loretta; Szczyglowski, Krzysztof.

    In: Plant Journal, Vol. 78, No. 5, 06.2014, p. 811-821.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  46. Published

    Genetic Diversity and Population Structure Analysis of European Hexaploid Bread Wheat (Triticum aestivum L.) Varieties. / Nielsen, Nanna Hellum; Backes, Gunter; Stougaard, Jens; Andersen, Stig Uggerhøj; Jahoor, Ahmed.

    In: PLOS ONE, Vol. 9, No. 4, e94000, 04.2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  47. Published

    Signaling unmasked : Autophagy and catalase promote programmed cell death. / Petersen, Morten; Hofius, Daniel; Andersen, Stig Uggerhøj.

    In: Autophagy, Vol. 10, No. 3, 03.2014, p. 520-521.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleCommissionedpeer-review

  48. Published

    Proteome reference maps of the Lotus japonicus nodule and root. / Dam, Svend; Dyrlund, Thomas Franck; Ussatjuk, Anna; Jochimsen, Bjarne; Nielsen, Kasper; Goffard, Nicolas; Ventosa, Miguel André Lorenzo; Lorentzen, Andrea Maria; Gupta, Vikas; Andersen, Stig U; Enghild, Jan J; Ronson, Clive W; Roepstorff, Peter; Stougaard, Jens.

    In: Proteomics, Vol. 14, No. 2-3, 02.2014, p. 230-240.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  49. Published

    Spider genomes provide insight into composition and evolution of venom and silk. / Sanggaard, Kristian W; Bechsgaard, Jesper S; Fang, Xiaodong; Duan, Jinjie; Dyrlund, Thomas F; Gupta, Vikas; Jiang, Xuanting; Cheng, Ling; Fan, Dingding; Feng, Yue; Han, Lijuan; Huang, Zhiyong; Wu, Zongze; Liao, Li; Settepani, Virginia; Thøgersen, Ida B; Vanthournout, Bram; Wang, Tobias; Zhu, Yabing; Funch, Peter; Enghild, Jan Johannes; Schauser, Leif; Andersen, Stig U; Villesen, Palle; Schierup, Mikkel Heide; Bilde, Trine; Wang, Jun.

    In: Nature Communications, Vol. 5, 3765, 2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  50. 2013
  51. Published

    Catalase and NO CATALASE ACTIVITY1 Promote Autophagy-Dependent Cell Death in Arabidopsis. / Hackenberg, Thomas; Juul, Trine; Auzina, Aija; Gwizdz, Sonia; Malolepszy, Anna; Van Der Kelen, Katrien; Dam, Svend; Bressendorff, Simon; Lorentzen, Andrea Maria; Roepstorff, Peter; Lehmann Nielsen, Kåre; Jørgensen, Jan-Elo; Hofius, Daniel; Van Breusegem, Frank; Petersen, Morten; Andersen, Stig Uggerhøj.

    In: Plant Cell, Vol. 25, No. 11, 27.11.2013, p. 4616-4626.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  52. Published

    High-Throughput and Targeted Genotyping of Lotus japonicus LORE1 Insertion Mutants. / Urbanski, Dorian Fabian; Malolepszy, Anna; Stougaard, Jens; Andersen, Stig Uggerhøj.

    In: Methods in Molecular Biology, Vol. 1069, 2013, p. 119-146.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  53. 2012
  54. Published

    Negative regulation of CCaMK is essential for symbiotic infection. / Liao, Jinqiu; Singh, Sylvia; Hossain, Md S; Andersen, Stig Uggerhøj; Ross, Loretta; Bonetta, Dario; Zhou, Yonghong; Sato, Shusei; Tabata, Satoshi; Stougaard, Jens; Szczyglowski, Krzysztof; Parniske, Martin.

    In: Plant Journal, Vol. 72, No. 4, 11.2012, p. 572-584.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  55. Published

    A Set of Lotus japonicus Gifu x Lotus burttii Recombinant Inbred Lines Facilitates Map-based Cloning and QTL Mapping. / Sandal, Niels; Jin, Haojie; Rodriguez-Navarro, Dulce Nombre; Temprano, Francisco; Cvitanich, Cristina; Brachmann, Andreas; Sato, Shusei; Kawaguchi, Masayoshi; Tabata, Satoshi; Parniske, Martin; Ruiz-Sainz, Jose E; Andersen, Stig Uggerhøj; Stougaard, Jens.

    In: D N A Research, Vol. 19, No. 4, 08.2012, p. 317-323.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  56. Published

    Genome-wide LORE1 retrotransposon mutagenesis and high-throughput insertion detection in Lotus japonicus. / Urbanski, Dorian Fabian; Malolepszy, Anna; Stougaard, Jens; Andersen, Stig Uggerhøj.

    In: Plant Journal, Vol. 69, No. 4, 02.2012, p. 731-741.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  57. Published

    shortran : A pipeline for small RNA-seq data analysis. / Gupta, Vikas; Markmann, Katharina; Pedersen, Christian Nørgaard Storm; Stougaard, Jens; Andersen, Stig Uggerhøj.

    In: Bioinformatics, Vol. 28, No. 20, 2012, p. 2698-2700.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  58. 2010
  59. Published

    Hormonal control of the shoot stem-cell niche. / Zhao, Zhong; Andersen, Stig U; Ljung, Karin; Dolezal, Karel; Miotk, Andrej; Schultheiss, Sebastian J; Lohmann, Jan U.

    In: Nature, Vol. 465, No. 7301, 2010, p. 1089-92.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  60. Published

    The in vivo toxicity of hydroxyurea depends on its direct target catalase. / Juul, Trine; Malolepszy, Anna; Dybkaer, Karen; Kidmose, Rune; Rasmussen, Jan Trige; Andersen, Gregers Rom; Johnsen, Hans Erik; Jørgensen, Jan-Elo; Andersen, Stig Uggerhøj.

    In: Journal of Biological Chemistry, 2010.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  61. 2009
  62. Published

    DETORQUEO, QUIRKY, and ZERZAUST represent novel components involved in organ development mediated by the receptor-like kinase STRUBBELIG in Arabidopsis thaliana. / Fulton, Lynette; Batoux, Martine; Vaddepalli, Prasad; Yadav, Ram Kishor; Busch, Wolfgang; Andersen, Stig U; Jeong, Sangho; Lohmann, Jan U; Schneitz, Kay.

    In: PLoS genetics, Vol. 5, No. 1, 2009, p. e1000355.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  63. Published

    Role of A-type ARABIDOPSIS RESPONSE REGULATORS in meristem maintenance and regeneration. / Buechel, Sabine; Leibfried, Andrea; To, Jennifer P C; Zhao, Zhong; Andersen, Stig U; Kieber, Joseph J; Lohmann, Jan U.

    In: European Journal of Cell Biology, 2009.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  64. Published

    SHOREmap: simultaneous mapping and mutation identification by deep sequencing. / Schneeberger, Korbinian; Ossowski, Stephan; Lanz, Christa; Juul, Trine; Petersen, Annabeth Høgh; Nielsen, Kåre Lehmann; Jørgensen, Jan-Elo; Weigel, Detlef; Andersen, Stig Uggerhøj.

    In: Nature Methods, Vol. 6, No. 8, 2009, p. 550-1.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  65. 2008
  66. Published

    Requirement of B2-Type Cyclin-Dependent Kinases for Meristem Integrity in Arabidopsis thaliana. / Andersen, Stig Uggerhøj; Buechel, Sabine; Zhao, Zhong; Ljung, Karin; Novák, Ondrej; Busch, Wolfgang; Schuster, Christoph; Lohmann, Jan U.

    In: Plant Cell, Vol. 20, 2008, p. 88-100.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  67. 2007
  68. Published

    The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds zinc in vitro and TSO1 is required for both male and female fertility in Arabidopsis thaliana. / Andersen, Stig Uggerhøj; Algreen-Petersen, Randi Groslier; Hödl, Martina; Jurkiewicz, Anna; Cvitanich, Cristina; Braunschweig, Ulrich; Schauser, Leif; Oh, Sung-Aeong; Twell, David; Jensen, Erik Østergaard.

    In: Journal of Experimental Botany, Vol. 58, 2007, p. 3657-3670.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  69. 2005
  70. Published

    Vectors for reverse genetics and expression analysis. / Andersen, Stig Uggerhøj; Cvitanich, Cristina; Busk, Hanne; Jensen, Dorthe Bødker; Jensen, Erik Østergaard; Grønlund, Mette.

    Lotus japonicus Handbook. 2005.

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearch

  71. 2004
  72. Published

    Characterization of the Tesmin/TSO1 - like twin CXC domain protein family. / Andersen, S.U.

    2004.

    Research output: Book/anthology/dissertation/reportPh.D. thesis

  73. 2003
  74. Published

    The glucocorticoid-inducible GVG system causes severe growth defects in both root and shoot of the model legume Lotus japonicus. / Andersen, S.U.; Cvitanich, C.; Hougaard, B.K.; Roussis, A.; Grønlund, M.; Bødker Jensen, D.; Frøkjær, L.A.; Jensen, E.Ø.

    In: Mol. Plant-Microbe Interact., Vol. 16, 2003, p. 1069-1076.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review