Aarhus University Seal / Aarhus Universitets segl

Søren Lykke-Andersen

  1. 2018
  2. Published

    Characterising cis-regulatory variation in the transcriptome of histologically normal and tumour-derived pancreatic tissues. / Zhang, Mingfeng; Lykke-Andersen, Soren; Zhu, Bin; Xiao, Wenming; Hoskins, Jason W; Zhang, Xijun; Rost, Lauren M; Collins, Irene; Bunt, Martijn van de; Jia, Jinping; Parikh, Hemang; Zhang, Tongwu; Song, Lei; Jermusyk, Ashley; Chung, Charles C; Zhu, Bin; Zhou, Weiyin; Matters, Gail L; Kurtz, Robert C; Yeager, Meredith; Jensen, Torben Heick; Brown, Kevin M; Ongen, Halit; Bamlet, William R; Murray, Bradley A; McCarthy, Mark I.; Chanock, Stephen J; Chatterjee, Nilanjan; Wolpin, Brian M; Smith, Jill P; Olson, Sara H; Petersen, Gloria M; Shi, Jianxin; Amundadottir, Laufey.

    In: Gut, Vol. 67, No. 3, 01.03.2018, p. 521-533.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  3. Published

    Box C/D snoRNP Autoregulation by a cis-Acting snoRNA in the NOP56 Pre-mRNA. / Lykke-Andersen, Søren; Ardal, Britt Kidmose; Hollensen, Anne Kruse; Damgaard, Christian Kroun; Jensen, Torben Heick.

    In: Molecular Cell, Vol. 72, No. 1, 04.10.2018, p. 99-111.e1-e5.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. Published

    Investigation of RNA Synthesis Using 5-Bromouridine Labelling and Immunoprecipitation. / Kofoed, Rikke H; Betzer, Cristine; Lykke-Andersen, Søren; Molska, Ewa; Jensen, Poul H.

    In: Journal of Visualized Experiments, No. 135, 03.05.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  5. 2017
  6. Published

    Polo-like kinase 2 modulates α-synuclein protein levels by regulating its mRNA production. / Kofoed, Rikke H; Zheng, Jin; Ferreira, Nelson; Lykke-Andersen, Søren; Salvi, Mauro; Betzer, Cristine; Reimer, Lasse; Jensen, Torben Heick; Fog, Karina; Jensen, Poul Henning.

    In: Neurobiology of Disease, Vol. 106, 17.10.2017, p. 49-62.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  7. 2016
  8. Published

    Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts. / Meola, Nicola; Domanski, Michal; Karadoulama, Evdoxia; Chen, Yun; Gentil, Coline; Pultz, Dennis; Vitting-Seerup, Kristoffer; Lykke-Andersen, Søren; Andersen, Jens S; Sandelin, Albin; Jensen, Torben Heick.

    In: Molecular Cell, Vol. 64, No. 3, 03.11.2016, p. 520-533.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  9. Published

    Relationships between PROMPT and gene expression. / Llinares, Marta Lloret; Mapendano, Christophe Kamungu; Martlev, Lasse Hynkemejer; Lykke-Andersen, Søren; Jensen, Torben Heick.

    In: RNA Biology, Vol. 13, No. 1, 02.01.2016, p. 6-14.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  10. Published

    Structure of the RBM7-ZCCHC8 core of the NEXT complex reveals connections to splicing factors. / Falk, Sebastian; Finogenova, Ksenia; Sørensen, Mireille Melko; Benda, Christian; Lykke-Andersen, Søren; Jensen, Torben Heick; Conti, Elena.

    In: Nature Communications, Vol. 7, 13573, 01.12.2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  11. 2015
  12. Published

    Nonsense-mediated mRNA decay : an intricate machinery that shapes transcriptomes. / Lykke-Andersen, Søren; Jensen, Torben Heick.

    In: Nature Reviews. Molecular Cell Biology, Vol. 16, 11.2015, p. 665-677.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  13. 2014
  14. Published

    Human nonsense-mediated RNA decay initiates widely by endonucleolysis and targets snoRNA host genes. / Lykke-Andersen, Søren; Chen, Yun; Ardal, Britt; Lilje, Berit; Waage, Johannes Eichler; Sandelin, Albin Gustav; Jensen, Torben Heick.

    In: Genes & Development, Vol. 28, No. 22, 15.11.2014, p. 2498-2517.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  15. 2013
  16. Published

    Making ends meet: Coordination between RNA 3'end processing and transcription initiation. / Andersen, Pia Kjølhede; Jensen, Torben Heick; Lykke-Andersen, Søren.

    In: Wiley Interdisciplinary Reviews: RNA, Vol. 4, No. 3, 2013, p. 233-246.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  17. 2012
  18. Published

    Stable Cell Lines with Splicing Reporters. / Damgaard, Christian Kroun; Lykke-Andersen, Søren; Kjems, Jørgen.

    Alternative pre-mRNA Splicing: Theory and Protocols. ed. / Stefan Stamm; Christopher W. J. Smith; Reinhard Luhrmann. 1. ed. Wiley-VCH, 2012. p. 408-414.

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearch

  19. Published

    Promoter proximal polyadenylation sites reduce transcription activity. / Andersen, Pia Kjølhede; Lykke-Andersen, Søren; Jensen, Torben Heick.

    In: Genes & Development, Vol. 26, 01.10.2012, p. 2169-2179.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. 2011
  21. Published

    Identification of novel RNA degradation pathways in human cells. RNA 2011 meeting, Kyoto, Japan 14-18 June. / Lubas, Michal Szymon; Christensen, Marianne Skovgaard; Falkenby , L; Domanski, Michal; Lykke-Andersen, Søren; Andersen, J; Dziembowski, A; Jensen, Torben Heick.

    2011.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  22. Published

    The Nuclear EXosome Targeting (NEXT) complex - a new player in RNA surveillance in human cells. / Lubas, Michal Szymon; Christensen, Marianne Skovgaard; Kristiansen, Maiken Søndergaard; Falkenby, Lasse; Domanski, Michal; Lykke-Andersen, Søren; Andersen, Jens; Dziembowski, Andzej; Jensen, Torben Heick.

    2011. Abstract from RNA 2011, Kyoto, Japan.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  23. Published

    The Putative Non-canonical Human Poly(A) polymerase hTrf4-2 is Found in Nuclear Exosome Preparations and interacts with RNA Splicing and snoRNA processing factors. / Christensen, Marianne Skovgaard; Lubas, Michal Szymon; Kristiansen, Maiken Søndergaard; Falkenby, Lasse; Domanski, Michal; Lykke-Andersen, Søren; Andersen, Jens S.; Dziembowski, Andrzej; Jensen, Torben Heick.

    2011. Abstract from RNA 2011, Kyoto, Japan.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  24. Published

    An ending is a new beginning: Transcription termination supports re-initiation. / Lykke-Andersen, Søren; Mapendano, Christophe K; Jensen, Torben Heick.

    In: Cell Cycle, Vol. 10, No. 6, 15.03.2011, p. 863-865.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  25. Published

    The eukaryotic RNA exosome: Same scaffold but variable catalytic subunits. / Lykke-Andersen, Søren; Tomecki, Rafal; Jensen, Torben Heick; Dziembowski, Andrzej.

    In: RNA Biology, Vol. 8, No. 1, 01.01.2011.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  26. Published

    Interaction Profiling Identifies the Human Nuclear Exosome Targeting Complex. / Lubas, Michal Szymon; Christensen, Marianne Skovgaard; Kristiansen, Maiken Søndergaard; Domanski, Michal; Falkenby, Lasse G.; Lykke-Andersen, Søren; Andersen, Jens S.; Dziembowski, Andrzej; Jensen, Torben Heick.

    In: Molecular Cell, 2011.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  27. 2010
  28. Published

    The human core exosome associates with differentially localized processive ribonucleases: hDIS3 and hDIS3L. / Tomecki, Rafal; Kristiansen, Maiken Søndergaard; Lykke-Andersen, Søren; Chlebowski, Aleksander; Larsen, Katja Malene; Szczesny, Roman J; Drazkowska, Karolina; Pastula, Agnieszka; Andersen, Jens S.; Stepien, Piotr P; Dziembowski, Andrzej; Jensen, Torben Heick.

    In: E M B O Journal, Vol. 29, No. 14, 2010, p. 2342-2357.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  29. Published

    Crosstalk between mRNA 3’ end processing and transcription initiation. / Mapendano, Christophe Kamungu; Lykke-Andersen, Søren; Kjems, Jørgen; Bertrand, Edouard; Jensen, Torben Heick.

    In: Molecular Cell, Vol. 40, 2010, p. 410-422.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  30. 2009
  31. Published

    Practical course in Molecular Cell Biology. / Pedersen, Lene; Pedersen, Lasse Ebdrup; Bøtkjær, Kenneth Alrø; Vestergaard, Anna Lindeløv; Ward, Sarah; Andersen, Lisbeth Moreau; Mikkelsen, Jakob Hauge; Bechstein, Stefanie; Lassen, Louise Berkhoudt; Liu, Zhou; Beer, Christiane; Chen, Zhou; Lykke-Andersen, Søren; Gao, Shan; Sørensen, Hans Peter; Duch, Mogens R.; Schmitt-John, Thomas; Andreasen, Peter; Martensen, Pia Møller.

    1. ed. Århus, 2009. 61 p.

    Research output: Book/anthology/dissertation/reportCompendium/lecture notesEducation

  32. Published

    Origins and activities of the eukaryotic exosome. / Lykke-Andersen, Søren; Brodersen, Ditlev Egeskov; Jensen, Torben Heick.

    In: Journal of Cell Science, Vol. 122, No. 10, 2009, p. 1487-94.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearch

  33. Published

    Assembly of an export-competent mRNP is needed for efficient release of the 3' end processing complex after polyadenylation. / Qu, X; Lykke-Andersen, Søren; Nasser, Tommy; Saguez, Cyril; Bertrand, Edouard; Jensen, Torben Heick; Moore, Claire.

    In: Molecular and Cellular Biology, Vol. 29, No. 19, 2009.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  34. Published

    SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells. / Eberle, Andrea; Lykke-Andersen, Søren; Mühlemann, Oliver; Jensen, Torben Heick.

    In: Nature Structural and Molecular Biology, Vol. 16, No. 1, 16.01.2009, p. 49-55.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  35. 2008
  36. Published

    RNA Exosome Depletion Reveals Transcription Upstream of Active Human Promoters. / Preker, Pascal; Nielsen, Jesper; Kammler, Susanne; Lykke-Andersen, Søren; Christensen, Marianne S; Mapendano, Christophe K; Schierup, Mikkel Heide; Jensen, Torben Heick.

    In: Science, Vol. 322, No. 5909, 19.12.2008, p. 1851-1854.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

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