Department of Biology

Aarhus University Seal / Aarhus Universitets segl

Philip Francis Thomsen

  1. 2022
  2. Published

    A National Scale “BioBlitz” Using Citizen Science and eDNA Metabarcoding for Monitoring Coastal Marine Fish. / Agersnap, Sune; Sigsgaard, Eva Egelyng; Jensen, Mads Reinholdt et al.

    In: Frontiers in Marine Science, Vol. 9, 824100, 03.2022.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  3. Published

    Occurrence and Livestock Depredation Patterns by Wolves in Highly Cultivated Landscapes. / Mayer, Martin; Olsen, Kent; Schulz, Björn et al.

    In: Frontiers in Ecology and Evolution, Vol. 10, 783027, 02.2022.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. Published

    Individual haplotyping of whale sharks from seawater environmental DNA. / Dugal, Laurence; Thomas, Luke; Jensen, Mads Reinholdt et al.

    In: Molecular Ecology Resources, Vol. 22, No. 1, 01.2022, p. 56-65.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  5. E-pub ahead of print

    Short-term temporal variation of coastal marine eDNA. / Jensen, Mads Reinholdt; Sigsgaard, Eva Egelyng; de Paula Avila, Marcelo et al.

    In: Environmental DNA, 2022.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  6. 2021
  7. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark : 3. kvartal 2021. / Olsen, Kent; Sunde, Peter; Vedel-Smith, Christina et al.

    2021. 19 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus; No. 86).

    Research output: Memorandum/expositionMemorandumpeer-review

  8. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus): 2 kvartal 2021. / Olsen, Kent; Sunde, Peter; Vedel-Smith, Christina et al.

    2021. 19 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus; No. 77).

    Research output: Memorandum/expositionMemorandumpeer-review

  9. Published

    Population limiting mortality factors affecting wolves in Western Europe’s cultivated landscapes: Denmark and northernmost Germany as examples. / Sunde, Peter; Collet, Sebastian; Nowak, Carsten et al.

    2021. Abstract from IUGB 2021. 35th Congress of the International Union of Game Biologists & 15th Perdix Congress, Budapest, Hungary.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  10. Published

    Where have all the young wolves gone? Traffic and cryptic mortality create a wolf population sink in Denmark and northernmost Germany. / Sunde, Peter; Collet, Sebastian; Nowak, Carsten et al.

    In: Conservation Letters, Vol. 14, No. 5, e12812, 09.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperLetterResearchpeer-review

  11. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark : 1. Kvartal 2021. / Olsen, Kent; Sunde, Peter; Vedel-Smith, Christina et al.

    2021. 18 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus; No. 54).

    Research output: Memorandum/expositionMemorandumpeer-review

  12. Published

    Environmental DNA metabarcoding of cow dung reveals taxonomic and functional diversity of invertebrate assemblages. / Sigsgaard, Eva Egelyng; Olsen, Kent; Hansen, Morten D.D. et al.

    In: Molecular Ecology, Vol. 30, No. 13, 07.2021, p. 3374-3389.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  13. Published

    Seasonal turnover in community composition of stream‐associated macroinvertebrates inferred from freshwater environmental DNA metabarcoding. / Jensen, Mads Reinholdt; Sigsgaard, Eva Egelyng; Agersnap, Sune et al.

    In: Environmental DNA, Vol. 3, No. 4, 07.2021, p. 861-876.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  14. Published

    Genetic support for the current discrete conservation unit of the Central European wolf population. / Szewczyk, Maciej; Nowak, Carsten; Hulva, Pavel et al.

    In: Wildlife Biology, Vol. 2021, No. 2, wlb.00809, 05.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  15. Published

    Genome‐scale target capture of mitochondrial and nuclear environmental DNA from water samples. / Jensen, Mads Kristian Reinholdt; Sigsgaard, Eva Egelyng; Liu, Shenglin et al.

    In: Molecular Ecology Resources, Vol. 21, No. 3, 04.2021, p. 690-702.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  16. 2020
  17. Published

    Using vertebrate environmental DNA from seawater in biomonitoring of marine habitats. / Egelyng Sigsgaard, Eva; Torquato, Felipe; Frøslev, Tobias Guldberg et al.

    In: Conservation Biology, Vol. 34, No. 3, 06.2020, p. 697-710.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  18. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark - 4. kvartal 2019. / Olsen, Kent; Sunde, Peter; Vedel-Smith, Christina et al.

    2020. 15 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus).

    Research output: Memorandum/expositionMemorandum

  19. Published

    Population‐level inferences from environmental DNA – current status and future perspectives. / Sigsgaard, Eva Egelyng; Jensen, Mads Kristian Reinholdt; Winkelmann, Inger Eleanor et al.

    In: Evolutionary Applications (Online), Vol. 13, No. 2, 02.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. 2019
  21. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark - 3. kvartal 2019. / Olsen, Kent; Sunde, Peter; Vedel-Smith, Christina et al.

    2019. 17 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus).

    Research output: Memorandum/expositionMemorandum

  22. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark - 2. kvartal 2019. / Olsen, Kent; Sunde, Peter; Hansen, Michael Møller et al.

    2019. 19 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus).

    Research output: Memorandum/expositionMemorandum

  23. Published

    Consequences of marine barriers for genetic diversity of the coral-specialist yellowbar angelfish from the Northwestern Indian Ocean. / Torquato, Felipe; Range, Pedro; Ben-Hamadou, Radhouane et al.

    In: Ecology and Evolution, Vol. 9, No. 19, 10.2019, p. 11215-11226.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  24. Published

    The Sandy Zebra Shark : A New Color Morph of the Zebra Shark Stegostoma tigrinum, with a Redescription of the Species and a Revision of Its Nomenclature. / Dahl, Rikke Beckmann; Sigsgaard, Eva Egelyng; Mwangi, Gorret et al.

    In: Copeia, Vol. 107, No. 3, 09.2019, p. 524-541.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  25. Published

    Pancrustacean evolution illuminated by taxon-rich genomic-scale data sets with an expanded remipede sampling. / Lozano-Fernandez, Jesus; Giacomelli, Mattia; Fleming, James et al.

    In: Genome Biology and Evolution, Vol. 11, No. 8, 08.2019, p. 2055-2070.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  26. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark - 1. kvartal 2019. / Olsen, Kent; Sunde, Peter; Vedel-Smith, Christina et al.

    2019. 20 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus).

    Research output: Memorandum/expositionMemorandum

  27. Published

    DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions. / Zinger, Lucie; Bonin, Aurélie; Alsos, Inger G. et al.

    In: Molecular Ecology, Vol. 28, No. 8, 04.2019, p. 1857-1862.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperEditorialResearchpeer-review

  28. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark - 4. kvartal 2018. / Olsen, Kent; Sunde, Peter; Hansen, Michael Møller et al.

    2019. 18 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus).

    Research output: Memorandum/expositionMemorandum

  29. Published

    DNA-analyser fra ulvene GW923f, GW675f og GW491m samt supplerende artsbestemmelse af GW923f. / Olsen, Kent; Sunde, Peter; Hansen, Michael Møller et al.

    2019. 17 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus).

    Research output: Memorandum/expositionMemorandum

  30. Published

    Environmental DNA metabarcoding of wild flowers reveals diverse communities of terrestrial arthropods. / Thomsen, Philip Francis; Sigsgaard, Eva E.

    In: Ecology and Evolution, Vol. 9, No. 4, 02.2019, p. 1665-1679.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  31. Published

    DNA-analyser og beskrivelse af den Centraleuropæiske ulvebestand, herunder identifikation af ulve og ulvehybrider. / Olsen, Kent; Sunde, Peter; Hansen, Michael Møller et al.

    2019. 15 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus).

    Research output: Memorandum/expositionMemorandum

  32. Published

    Species-specific detection and quantification of environmental DNA from marine fishes in the Baltic Sea. / Knudsen, Steen Wilhelm; Ebert, Rasmus Bach; Hesselsøe, Martin et al.

    In: Journal of Experimental Marine Biology and Ecology, Vol. 510, 01.01.2019, p. 31-45.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  33. Published

    Environmental DNA for improved detection and environmental surveillance of schistosomiasis. / Sengupta, Mita E.; Hellström, Micaela; Kariuki, Henry C. et al.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 116, No. 18, 2019, p. 8931-8940.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  34. 2018
  35. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark - 3. kvartal 2018. / Olsen, Kent; Sunde, Peter; Vedel-Smith, Christina et al.

    2018. 16 p., (Notat fra DCE - Nationalt Center for Miljø og Energi).

    Research output: Memorandum/expositionMemorandum

  36. Published

    Statusrapport fra den nationale overvågning af ulv (Canis lupus) i Danmark - 2. kvartal 2018. / Olsen, Kent; Sunde, Peter; Hansen, Michael Møller et al.

    2018. 19 p., (Notat fra DCE - Nationalt Center for Miljø og Energi og Naturhistorisk Museum, Aarhus).

    Research output: Memorandum/expositionMemorandum

  37. Published

    Tracing European eel in the diet of mesopelagic fishes from the Sargasso Sea using DNA from fish stomachs. / Jensen, Mads Reinholdt; Knudsen, Steen Wilhelm; Munk, Peter et al.

    In: Marine Biology, Vol. 165, No. 8, 130, 08.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  38. 2017
  39. Published

    Seawater environmental DNA reflects seasonality of a coastal fish community. / Sigsgaard, Eva Egelyng; Nielsen, Ida Broman; Carl, Henrik et al.

    In: Marine Biology, Vol. 164, No. 6, 128, 06.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  40. Published

    Population characteristics of a large whale shark aggregation inferred from seawater environmental DNA. / Sigsgaard, Eva Egelyng; Nielsen, Ida Broman; Bach, Steffen Sanvig et al.

    In: Nature Ecology and Evolution, Vol. 1, No. 1, 0004, 01.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  41. Published

    Vertical zonation and functional diversity of fish assemblages revealed by ROV videos at oil platforms in The Gulf. / Torquato, Felipe; Jensen, Hannah M; Range, Pedro et al.

    In: Journal of Fish Biology, 2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  42. 2016
  43. Published

    Environmental DNA from Seawater Samples Correlate with Trawl Catches of Subarctic, Deepwater Fishes. / Thomsen, Philip Francis; Moller, Peter Rask; Sigsgaard, Eva Egelyng et al.

    In: PLOS ONE, Vol. 11, No. 11, 0165252, 16.11.2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  44. Published

    Critical considerations for the application of environmental DNA methods to detect aquatic species. / Goldberg, Caren S.; Turner, Cameron R.; Deiner, Kristy et al.

    In: Methods in Ecology and Evolution, Vol. 7, No. 11, 11.2016, p. 1299-1307.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  45. Published

    Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding. / Valentini, Alice; Taberlet, Pierre; Miaud, Claude et al.

    In: Molecular Ecology, Vol. 25, No. 4, 01.02.2016, p. 929-942.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  46. 2015
  47. Published

    Monitoring the near-extinct European weather loach in Denmark based on environmental DNA from water samples. / Sigsgaard, Eva Egelyng; Carl, Henrik; Moller, Peter Rask et al.

    In: Conservation Biology, 2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  48. 2009
  49. Published

    Non-destructive sampling of ancient insect DNA. / Thomsen, Philip Francis; Elias, Scott; Gilbert, M. Thomas P. et al.

    In: PLOS ONE, Vol. 4, No. 4, e5048, 01.04.2009.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review