Peter Sørensen

  1. 2020
  2. Published

    Genomic diversity revealed by whole-genome sequencing in three Danish commercial pig breeds. / Cai, Zexi; Sarup, Pernille; Ostersen, Tage; Nielsen, Bjarne; Fredholm, Merete; Karlskov-Mortensen, Peter; Sørensen, Peter; Jensen, Just; Guldbrandtsen, Bernt; Lund, Mogens Sandø; Christensen, Ole Fredslund; Sahana, Goutam.

    In: Journal of Animal Science, Vol. 98, No. 7, skaa229, 07.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  3. Published

    qgg : an R package for large-scale quantitative genetic analyses. / Rohde, Palle Duun; Fourie Sørensen, Izel; Sørensen, Peter.

    In: Bioinformatics (Oxford, England), Vol. 36, No. 8, 04.2020, p. 2614-2615.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. 2019
  5. Published

    Genetic Signatures of Drug Response Variability in Drosophila melanogaster. / Rohde, Palle Duun; Jensen, Iben Ravnborg; Sarup, Pernille Merete; Ørsted, Michael; Demontis, Ditte; Sørensen, Peter; Kristensen, Torsten Nygård.

    In: Genetics (Print), Vol. 213, No. 2, 08.10.2019, p. 633-650.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  6. Published

    Strong impact of thermal environment on the quantitative genetic basis of a key stress tolerance trait. / Ørsted, Michael; Hoffmann, Ary Anthony; Rohde, Palle Duun; Sørensen, Peter; Kristensen, Torsten Nygård.

    In: Heredity, Vol. 122, No. 3, 03.2019, p. 315-325.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  7. Published

    Impact of the rumen microbiome on milk fatty acid composition of Holstein cattle. / Buitenhuis, Bart; Lassen, Jan; Noel, Samantha Joan; Plichta, Damian R; Sørensen, Peter; Difford, Gareth F; Poulsen, Nina A.

    In: Genetics Selection Evolution, Vol. 51, No. 1, 23, 2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  8. 2018
  9. Published

    Understanding the potential bias of variance components estimators when using genomic models. / Cuyabano, Beatriz C.D.; Sørensen, A. Christian; Sørensen, Peter.

    In: Genetics Selection Evolution, Vol. 50, No. 1, 41, 06.08.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  10. Published

    MicroRNA-guided prioritization of genome-wide association signals reveals the importance of microRNA-target gene networks for complex traits in cattle. / Fang, Lingzhao; Sørensen, Peter; Sahana, Goutam; Panitz, Frank; Su, Guosheng; Zhang, Shengli; Yu, Ying; Li, Bingjie; Ma, Li; Liu, George; Lund, Mogens Sandø; Thomsen, Bo.

    In: Scientific Reports, Vol. 8, 9345, 19.06.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  11. Published

    Genomic Feature Prediction Models - Improved Prediction Accuracy by Joint Marker Estimation. / Rohde, Palle Duun; Sørensen, Izel Fourie; Sørensen, Peter.

    2018. Poster session presented at ESHG 2018: European Society of Human Genetics, Milano, Italy.

    Research output: Contribution to conferencePosterResearch

  12. Published

    Functional validation of candidate genes detected by genomic feature models. / Rohde, Palle Duun; Østergaard, Solveig ; Kristensen, Torsten Nygaard; Sørensen, Peter; Loeschcke, Volker; F C Mackay, Trudy; Sarup, Pernille Merete.

    In: G3: Genes, Genomes, Genetics (Bethesda), Vol. 8, No. 5, 05.05.2018, p. 1659-1668.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  13. Published

    Environmental variation partitioned into separate heritable components. / Ørsted, Michael; Rohde, Palle Duun; Hoffmann, Ary A; Sørensen, Peter; Kristensen, Torsten Nygård.

    In: Evolution, Vol. 72, No. 1, 01.2018, p. 136-152.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  14. Published

    H1 NMR metabolomic phenotypic prediction of growth in pigs. / Sarup, Pernille Merete; Jensen, Just; Ostersen, Tage; Christensen, Ole Fredslund; Sørensen, Peter.

    2018. Abstract from 69th Annual Meeting of the European Federation of Animal Science EAAP 2018, Dubrovnik, Croatia.

    Research output: Contribution to conferenceConference abstract for conferenceCommunication

  15. 2017
  16. Published

    Multiple Trait Covariance Association Test Identifies Gene Ontology Categories Associated with Chill Coma Recovery Time in Drosophila melanogaster /631/208/721 /631/208/721 /631/208/729/743 /631/208/729/743 /119 /45 /45/43 article. / Sørensen, Izel Fourie; Edwards, Stefan M.; Rohde, Palle Duun; Sørensen, Peter.

    In: Scientific Reports, Vol. 7, No. 1, 2413, 01.12.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  17. Published

    Use of biological priors enhances understanding of genetic architecture and genomic prediction of complex traits within and between dairy cattle breeds. / Fang, Lingzhao; Sahana, Goutam; Ma, Peipei; Su, Guosheng; Yu, Ying; Zhang, Shengli; Lund, Mogens Sandø; Sørensen, Peter.

    In: B M C Genomics, Vol. 18, 10.08.2017, p. 604.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  18. Published

    Genomic Analysis of Genotype-by-Social Environment Interaction for Drosophila melanogaster Aggressive Behavior. / Rohde, Palle Duun; Gartner, Bryn; Ward, Kirsty; Sørensen, Peter; F C Mackay, Trudy.

    In: Genetics (Print), Vol. 206, No. 4, 07.07.2017, p. 1969-1984.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  19. Published

    Whole blood optimization and genetic association of ex vivo TNF-alpha responsiveness to killed E-coli in Danish Holstein cows. / Khatun, M.; Jorgensen, H. B. H.; Ehsani, A.; Lund, M. S.; Sahana, G.; Sorensen, P.; Rontved, C. M.

    In: Livestock Science, Vol. 201, 07.2017, p. 92-98.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. Published

    Improved prediction of genetic predisposition to psychiatric disorders using genomic feature best linear unbiased prediction models. / Rohde, Palle Duun; Demontis, Ditte; Børglum, Anders; iPSYCH-Broad Consortium ; Sørensen, Peter.

    2017. Poster session presented at ESHG 2017: European Society of Human Genetics Annual Meeting, Copenhagen, Denmark.

    Research output: Contribution to conferencePosterResearch

  21. Published

    Exploring the genetic architecture and improving genomic prediction accuracy for mastitis and milk production traits in dairy cattle by mapping variants to hepatic transcriptomic regions responsive to intra-mammary infection. / Fang, Lingzhao; Sahana, Goutam; Ma, Peipei; Su, Guosheng; Yu, Ying; Zhang, Shengli; Lund, Mogens Sandø; Sørensen, Peter.

    In: Genetics Selection Evolution, Vol. 49, 44, 12.05.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  22. Published

    Integrating Sequence-based GWAS and RNA-Seq Provides Novel Insights into the Genetic Basis of Mastitis and Milk Production in Dairy Cattle. / Fang, Lingzhao; Sahana, Goutam; Su, Guosheng; Yu, Ying; Zhang, Shengli; Lund, Mogens Sandø; Sørensen, Peter.

    In: Scientific Reports, Vol. 7, 45560, 30.03.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  23. 2016
  24. Published

    Covariance Association Test (CVAT) Identifies Genetic Markers Associated with Schizophrenia in Functionally Associated Biological Processes. / Rohde, Palle Duun; Demontis, Ditte; Castro Dias Cuyabano, Beatriz; Børglum, Anders; Sørensen, Peter.

    2016. Poster session presented at 2nd Annual Danish Bioinformatics Conference, Odense, Denmark.

    Research output: Contribution to conferencePosterResearchpeer-review

  25. Published

    Covariance Association Test (CVAT) Identifies Genetic Markers Associated with Schizophrenia in Functionally Associated Biological Processes. / Rohde, Palle Duun; Demontis, Ditte; Castro Dias Cuyabano, Beatriz; Børglum, Anders; Sørensen, Peter.

    In: Genetics (Print), Vol. 203, No. 4, 01.08.2016, p. 1901-1913.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  26. Published

    Genomic prediction for quantitative traits is improved by mapping variants to gene ontology categories in Drosophila melanogaster. / Edwards, Stefan M.; Sørensen, Izel F.; Sarup, Pernille; Mackay, Trudy F C; Sørensen, Peter.

    In: Genetics, Vol. 203, No. 4, 01.08.2016, p. 1871-1883.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  27. Published

    ICQG 5 on Madison's Isthmus links genomics and statistics of complex traits. / Simianer, Henner; Sørensen, Peter.

    In: Journal of Animal Breeding and Genetics (Online), Vol. 133, No. 4, 08.2016, p. 249-250.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperEditorialResearchpeer-review

  28. Published

    Covariance Association Test (CVAT) Identifies Genetic Markers Associated with Schizophrenia in Functionally Associated Biological Processes. / Rohde, Palle Duun; Demontis, Ditte; Castro Dias Cuyabano, Beatriz; Børglum, Anders; Sørensen, Peter.

    2016. Poster session presented at 5th International Conference on Quantitative Genetics , Madison, United States.

    Research output: Contribution to conferencePosterResearchpeer-review

  29. Published

    The impact of intramammary Escherichia coli challenge on liver and mammary transcriptome and cross-talk in dairy cows during early lactation using RNAseq. / Moyes, K. M.; Sørensen, P.; Bionaz, M.

    In: P L o S One, Vol. 11, No. 6, e0157480, 01.06.2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  30. Published

    A Quantitative Genomic Approach for Analysis of Fitness and Stress Related Traits in a Drosophila melanogaster Model Population. / Rohde, Palle Duun; Krag, Kristian; Loeschcke, Volker; Overgaard, Johannes; Sørensen, Peter; Kristensen, Torsten Nygård.

    In: International Journal of Genomics, 04.2016, p. 1-11.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  31. Published

    Increased prediction accuracy using a genomic feature model including prior information on quantitative trait locus regions in purebred Danish Duroc pigs. / Sarup, Pernille Merete; Jensen, Just; Ostersen, Tage; Henryon, Mark; Sørensen, Peter.

    In: BMC Genetics, Vol. 17, No. 11, 05.01.2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  32. Published

    Decomposing genomic variances in a mouse F2 population using information from GWA, GWE and eQTL analyses. / Ehsani, Alireza; Janss, Luc; Pomp, Daniel; Sørensen, Peter.

    In: Animal Genetics, Vol. 47, No. 2, 2016, p. 165-173.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  33. Published

    ECO-FCE : Integrative genomic models for FCE in monogastries. / Sarup, Pernille Merete; Jensen, Just; Shirali, Mahmoud; Ostersen, Tage; H, Reyer ; Varley, P; Sørensen, Peter.

    Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production. Wageningen Academic Publishers, 2016. (Book of Abstracts of the Annual EAAP Meeting, Vol. 22).

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearchpeer-review

  34. Published

    Genome-wide transcriptional and post-transcriptional regulation of innate immune and defense responses of bovine mammary gland to Staphylococcus aureus. / Fang, Lingzhao; Hou, Yali; An, Jing; Li, Bingjie; Song, Minyan; Wang, Xiao; Sørensen, Peter; Dong, Yichun; Liu, Chao; Wang, Yachun; Zhu, Huabin; Zhang, Shengli; Yu, Ying.

    In: Frontiers in cellular and infection microbiology, Vol. 6, 193, 2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  35. Published

    Increased prediction accuracy using a genomic feature model including information on QTLs. / Sarup, Pernille Merete; Jensen, Just; Ostersen, T; Henryon, Mark; Sørensen, Peter.

    Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production. Wageningen Academic Publishers, 2016. (Book of Abstracts of the Annual EAAP Meeting, Vol. 22).

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearchpeer-review

  36. 2015
  37. Published

    Adaptation of dairy cattle and goat breeds to organic and low input production systems : Delivrable 2.5 Official deliverable of the 7th Framework Programme KBBE. / Arsenos, A.; Ferris, C; Moorby, J.M.; Rinne, M.; Sairanen, A; Shingfield, K; Sørensen, Peter; Steinwidder, A.; Vestergaard, Mogens; Zollitsch, W.

    2015. 135 p.

    Research output: Book/anthology/dissertation/reportReportResearch

  38. Published

    Biomarkers for health, fertility and milk quality of dairy cows : Delivrable 2.5 Official deliverable of the 7th Framework Programme KBBE. / Sørensen, Peter; Moorby, J.; Shingfield, K.; Vestergaard, Mogens.

    Adaptation of dairy cattle and goat breeds to organic and low input production systems. 2015. p. 108-115.

    Research output: Contribution to book/anthology/report/proceedingReport chapterResearch

  39. Published

    Genetic control of environmental variation of two quantitative traits of Drosophila melanogaster revealed by whole-genome sequencing. / Sørensen, Peter; de los Campos, Gustavo; Morgante, Fabio; F C Mackay, Trudy; Sorensen, Daniel.

    In: Genetics (Print), Vol. 201, No. 2, 01.10.2015, p. 487-497.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  40. Published

    Functional Insight From Fruit Flies on Human ADHD Candidate Genes. / Rohde, Palle Duun; Demontis, Ditte; Arvidson, Sandra Marie Neumann; Madsen, Lisbeth Strøm; Loeschcke, Volker; Sørensen, Peter; Børglum, Anders; Kristensen, Torsten Nygaard.

    Genes, Brain, and Behavior 2015: 17th Annual Meeting of the International Behavioural and Neural Genetics Society. Uppsala, 2015. p. 35.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsResearch

  41. Published

    Genetic Architecture of Micro-Environmental Plasticity in Drosophila melanogaster. / Morgante, Fabio; Sorensen, Peter; Sorensen, Daniel A.; Maltecca, Christian; Mackay, Trudy F. C.

    In: Scientific Reports, Vol. 5, 9785, 06.05.2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  42. 2014
  43. Published

    Genome-wide association and biological pathway analysis for milk-fat composition in Danish Holstein and Danish Jersey cattle. / Buitenhuis, Bart; Janss, Luc L G; Poulsen, Nina Aagaard; Larsen, Lotte Bach; Larsen, Mette Krogh; Sørensen, Peter.

    In: B M C Genomics, Vol. 15, No. 1112, 15.12.2014, p. 1-11.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  44. Published

    Pharmacogenetic effects of 'candidate gene complexes' on stroke in the GenHAT study. / Sørensen, Izel F; Vazquez, Ana I; Irvin, Marguerite R; Sørensen, Peter; Davis, Barry R; Ford, Charles E; Boerwinkle, Eric; Eckfeldt, John H; Arnett, Donna K.

    In: Pharmacogenetics and Genomics, Vol. 24, No. 11, 11.2014, p. 556-563.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  45. Published

    Changes in various metabolic parameters in blood and milk during experimental Escherichia coli mastitis for primiparous Holstein dairy cows during early lactation. / Moyes, Kasey M; Larsen, Torben; Sørensen, Peter; Ingvartsen, Klaus Lønne.

    In: Journal of Animal Science and Biotechnology, Vol. 5, 47, 10.2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  46. Published

    Flies who cannot take the heat: Genome-wide gene expression analysis of temperature-sensitive lethality in an inbred line of Drosophila melanogaster. / Vermeulen, C.J; Sørensen, Peter; Gagalova, K.K.; Loeschcke, Volker.

    In: Journal of Evolutionary Biology, Vol. 27, No. 10, 10.2014, p. 2152-2162.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  47. Published

    A random set scoring model for prioritization of disease candidate genes using protein complexes and data-mining of GeneRIF, OMIM and PubMed records. / Jiang, Li; Edwards, Stefan McKinnon; Thomsen, Bo; Workman, Christopher T.; Guldbrandtsen, Bernt; Sørensen, Peter.

    In: BMC Bioinformatics , Vol. 15, No. 315, 24.09.2014, p. 1-13.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  48. Published

    Imputation from 60K SNP data to whole-genome level in Danish Landrace and Duroc pigs. / Sarup, Pernille Merete; Guldbrandtsen, Bernt; Nielsen, Bjarne N; Sørensen, Peter; Jensen, Just.

    In: European Association for Animal Production. Annual Meeting. Book of Abstracts, 25.08.2014, p. 169-169.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperConference abstract in journalResearch

  49. Published

    Sequence-based partitioning of genomic variance using prior biological information. / Sørensen, Peter; Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sorensen, Daniel A.

    In: European Association for Animal Production. Annual Meeting. Book of Abstracts, Vol. 20, 25.08.2014, p. 167-167.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperConference abstract in journalResearch

  50. Published

    Gene-based Association Approach Identify Genes Across Stress Traits in Fruit Flies. / Rohde, Palle Duun; Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sørensen, Peter.

    2014. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.

    Research output: Contribution to conferencePaperResearchpeer-review

  51. Published

    Genomic Feature Models. / Sørensen, Peter; Edwards, Stefan McKinnon; Rohde, Palle Duun.

    2014. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.

    Research output: Contribution to conferencePaperResearchpeer-review

  52. Published

    Influence of Family Structure on Variance Decomposition. / Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sørensen, Peter.

    2014. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.

    Research output: Contribution to conferencePaperResearchpeer-review

  53. Published

    Influence of Family Structure on Variance Decomposition. / Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sørensen, Peter.

    2014. Poster session presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.

    Research output: Contribution to conferencePosterResearch

  54. Published

    Gene-based Association Approach Identify Genes Across Stress Traits in Fruit Flies. / Rohde, Palle Duun; Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sørensen, Peter.

    2014. Poster session presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.

    Research output: Contribution to conferencePosterResearch

  55. Published

    Genetic Analysis of Micro-environmental Plasticity in Drosophila melanogaster. / Morgante, Fabio; Sorensen, Daniel A; Sørensen, Peter; Maltecca, Christian; Mackay, Trudy F C.

    2014. Poster session presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.

    Research output: Contribution to conferencePosterResearch

  56. Published

    Genetic Analysis of Micro-environmental Plasticity in Drosophila melanogaster. / Morgante, Fabio; Sorensen, Daniel A; Sørensen, Peter; Maltecca, Christian; Mackay, Trudy F C.

    2014. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.

    Research output: Contribution to conferencePaperResearchpeer-review

  57. Published

    Separating Signal from Noise Estimating SNP-effects and Decomposing Genetic Variation to the Level of QTLs in Pure Breed Duroc Pigs. / Sarup, Pernille Merete; Jensen, Just; Edwards, Stefan McKinnon; Ostersen, Tage; Sørensen, Peter; Henryon, Mark Antione.

    2014. Paper presented at 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.

    Research output: Contribution to conferencePaperResearchpeer-review

  58. Published

    Comparison of Genome-Wide Association Methods in Analyses of Admixed Populations with Complex Familial Relationships. / Kadri, Naveen; Guldbrandtsen, Bernt; Sørensen, Peter; Sahana, Goutam.

    In: P L o S One, Vol. 9, No. 3, e88926, 03.2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  59. Published

    The long-term effects of a life-prolonging heat treatment on the Drosophila melanogaster transcriptome suggest that heat shock proteins extend lifespan. / Sarup, Pernille Merete; Sørensen, Peter; Loeschcke, Volker.

    In: Experimental Gerontology, Vol. 50, 02.2014, p. 34-39.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  60. Published

    Effects of high hydrostatic pressure on genomic expression profiling of porcine parthenogenetic activated and cloned embryos. / Lin, Lin; Luo, Yonglun; Sørensen, Peter; Prætorius, Helle; Vajta, Gabor; Callesen, Henrik; Pribenszky, Csaba; Bolund, Lars; Kristensen, Torsten Nygård.

    In: Reproduction, Fertility and Development, Vol. 26, 2014, p. 469-484.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  61. 2013
  62. Published

    Genome-wide and local pattern of linkage disequilibrium and persistence of phase for 3 Danish pig breeds. / Wang, Lei; Sørensen, Peter; Janss, Luc; Ostersen, Tage; Edwards, David.

    In: BMC Genetics, Vol. 14, No. 115, 05.12.2013.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  63. Published

    Genetic regulation of environmental variation in Drosophila inbred lines. / Sorensen, Daniel; Sørensen, Peter; de los Campos, G.

    Book of Abstracts. 2013. p. 67.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  64. Published

    Genomic Feature Models. / Sørensen, Peter; Edwards, Stefan McKinnon; Madsen, Per; Jensen, Palle; Sørensen, Izel Fourie; de los Campos, Gustavo; Sorensen, Daniel.

    Book of Abstracts. 2013. p. 68.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  65. Published

    Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. / Vermeulen, Cornelis Joseph; Sørensen, Peter; Kirilova Gagalova, K; Loeschcke, Volker.

    In: Journal of Evolutionary Biology, Vol. 26, No. 9, 09.2013, p. 1890-1902.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  66. Published

    A novel method to visualize local variation of LD and persistence of phase for 3 Danish pig breeds. / Wang, Lei; Sørensen, Peter; Janss, Luc; Ostersen, T; Edwards, David.

    Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production. Vol. 19 2013. ed. The Netherland : Wageningen Academic Publishers, 2013. p. 174.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearchpeer-review

  67. Published

    Partitioning of genomic variance using prior biological information. / Edwards, Stefan McKinnon; Janss, Luc; Madsen, Per; Sørensen, Peter.

    2013. Poster session presented at 64th Annual Meeting of the European Federation of Anmal Science, Nantes, France.

    Research output: Contribution to conferencePosterResearch

  68. Published

    Partitioning of genomic variance using prior biological information. / Edwards, Stefan McKinnon; Janss, Luc; Madsen, Per; Sørensen, Peter.

    Book of Abstracts of the 64th Annual Meeting of the European Association for Animal Production. Vol. 19 2013. ed. The Netherland : Wageningen Academic Publishers, 2013. p. 539.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearchpeer-review

  69. Published

    Partitioning of genomic variance using biological pathways. / Edwards, Stefan McKinnon; Janss, Luc; Madsen, Per; Sørensen, Peter.

    2013. Poster session presented at Joint 21st Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) and 12th European Conference on Computational Biology (ECCB) 2013, Berlin, Germany.

    Research output: Contribution to conferencePosterResearch

  70. Published

    Prioritization of candidate genes for cattle reproductive traits, based on protein-protein interactions, gene expression, and text-mining. / Hulsegge, Ina; Woelders, Henri; Smits, Mari; Schokker, Dirkjan; Jiang, Li; Sørensen, Peter.

    In: Physiological Genomics, Vol. 45, No. 10, 15.05.2013, p. 400-406.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  71. Published

    QTLs for Mastitis Resistance in Cattle. / Lund, Mogens Sandø (Inventor); Bendixen, Christian (Inventor); Sahana, Goutam (Inventor); Sørensen, Peter (Inventor); Svendsen, Søren (Inventor); Thomsen, Bo (Inventor); Majgren, Bente Flügel (Inventor); Sabry, Ayman Mohmoud (Inventor); Andersson-Eklund, Ingrid Lena (Inventor); Vilkki, Johanna Helmi (Inventor); Iso-Touru, Terhi Katalina (Inventor); Vitala, Sirja Maria (Inventor); Schulman, Nina Frederika (Inventor); Hastings, Nicola (Inventor); Williams, John Lewis William (Inventor); Woolliams, John Athur (Inventor); Avila, Ana Isabel Fernandez (Inventor); Viinalass, Haldja (Inventor); Vårv, Sirje (Inventor).

    IPC No.: WO 2007/090399. Patent No.: PCT/DK2007/000058. Apr 10, 2013.

    Research output: Patent

  72. Published

    Effects of Bos taurus autosome 9-located quantitative trait loci haplotypes on the disease phenotypes of dairy cows with experimentally induced Escherichia coli mastitis. / Khatun, Momena; Sørensen, Peter; Jørgensen, Hanne Birgitte Hede; Sahana, Goutam; Sørensen, Lars Peter; Lund, Mogens Sandø; Ingvartsen, Klaus Lønne; Buitenhuis, Bart; Vilkki, Johanna; Bjerring, Martin; Thomasen, Jørn Rind; Røntved, Christine Maria.

    In: Journal of Dairy Science, Vol. 96, No. 3, 03.2013, p. 1820-1833.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  73. Published

    Effects of combined liver and udder biopsying on the acute phase response of dairy cows with experimentally induced E. coli mastitis. / Khatun, Momena; Sørensen, Peter; Ingvartsen, Klaus Lønne; Bjerring, Martin; Røntved, Christine Maria.

    In: Animal, Vol. 7, No. 10, 2013, p. 1721-1730.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  74. Published

    Estimation of genetic parameters and detection of quantitative trait loci for metabolites in Danish Holstein milk. / Buitenhuis, Albert Johannes; Sundekilde, Ulrik; Poulsen, Nina Aagaard; Bertram, Hanne Christine S.; Larsen, Lotte Bach; Sørensen, Peter.

    In: Journal of Dairy Science, Vol. 96, No. 5, 2013, p. 3285 3295.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  75. 2012
  76. Published

    Inferring genetic architecture of complex traits using Bayesian integrative analysis of genome and transcriptiome data. / Ehsani, Alireza; Sørensen, Peter; Pomp, Daniel; Allan, Mark; Janss, Luc.

    In: B M C Genomics, Vol. 13, No. 456, 05.09.2012, p. 1-9.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  77. Published

    Comparison of Association Mapping Methods in Admixed Populations. / Kadri, Naveen Kumar; Guldbrandtsen, Bernt; Sørensen, Peter; Sahana, Goutam.

    2012. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

    Research output: Contribution to conferencePosterResearch

  78. Published

    Comparison of Association Mapping Methods in Admixture Population. / Kadri, Naveen Kumar; Guldbrandtsen, Bernt; Sørensen, Peter; Sahana, Goutam.

    Programme & Book of Abstracts of ICQG 2012. Edinburgh, 2012. p. 232-232.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsResearchpeer-review

  79. Published

    Gene prioritization by data integration. / Jiang, Li; Janss, Luc; Høj-Edwards, Stefan McKinnon; Skarman, Axel; Thomsen, Bo; Sørensen, Peter.

    Programme & Book of Abstracts, ICQG2012. Edinburgh, 2012. p. 87-88.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsResearch

  80. Published

    Gene prioritization by data integration. / Jiang, Li; Janss, Luc; Høj-Edwards, Stefan McKinnon; Skarman, Axel; Thomsen, Bo; Sørensen, Peter.

    2012. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

    Research output: Contribution to conferencePosterResearch

  81. Published

    Omic Partitioning of Complex Traits : by Variance Components Analysis Using Bayesian Variable Selection Models. / Ehsani, Ali Reza; Janss, Luc; Pomp, Daniel; Sørensen, Peter.

    Programme & Book of Abstracts ICQG2012. Edinburgh, 2012. p. 198-198.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsResearch

  82. Published

    Omic Partitioning of Complex Traits : by Variance Components Analysis Using Bayesian Variable Selection Models. / Ehsani, Ali Reza; Janss, Luc; Pomp, Daniel; Sørensen, Peter.

    2012. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

    Research output: Contribution to conferencePosterResearch

  83. Published

    Using Kegg Pathways and Expression Studies and Stuff for Genomic Partitioning. / Høj-Edwards, Stefan McKinnon; Jiang, Li; Madsen, Per; Sørensen, Peter.

    2012. Poster session presented at 4th International Conference on Quantitative Genetics, Edinburgh, United Kingdom.

    Research output: Contribution to conferencePosterResearch

  84. Published

    Transcriptional profiling of the bovine hepatic response to experimentally induced E. coli mastitis. / Jørgensen, Hanne Birgitte Hede; Buitenhuis, Bart; Røntved, Christine Maria; Jiang, Li; Ingvartsen, Klaus Lønne; Sørensen, Peter.

    In: Physiological Genomics, Vol. 44, No. 11, 01.06.2012, p. 595-606.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  85. Published

    A two step Bayesian approach for genomic prediction of breeding values. / Mahdi Shariati, Mohammad; Sørensen, Peter; Janss, Luc.

    In: BMC Proceedings, Vol. 6, No. (Suppl 2):S12 , 21.05.2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperConference articleResearchpeer-review

  86. Published

    A Bayesian variable selection procedure for ranking overlapping gene sets. / Skarman, Axel; Mahdi Shariati, Mohammad; Janss, Luc; Jiang, Li; Sørensen, Peter.

    In: B M C Bioinformatics, Vol. 13, No. 73, 03.05.2012, p. 1-9.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  87. Published

    Gene prioritization for livestock diseases by data integration. / Jiang, Li; Sørensen, Peter; Thomsen, Bo; Høj-Edwards, Stefan McKinnon; Skarman, Axel; Røntved, Christine M; Lund, Mogens S; Workman, Christopher.

    In: Physiological Genomics, Vol. 44, No. 5, 03.2012, p. 305-317.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  88. Published

    Sickness behavior in dairy cows during Escherichia coli mastitis. / Fogsgaard, Katrine Kop; Røntved, Christine Maria; Sørensen, Peter; Herskin, Mette S.

    In: Journal of Dairy Science, Vol. 95, No. 2, 02.2012, p. 630-638.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  89. Published

    Methods for genome wide association study in structured population. / Kadri, Naveen Kumar; Sahana, Goutam; Sørensen, Peter; Guldbrandtsen, Bernt.

    MBG Annual PhD-days 2012. Aarhus University, 2012. p. 19-19.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsCommunication

  90. Published

    Using KEGG pathway information for genomic partitioning. / Edwards, Stefan McKinnon; Skarman, Axel; Jiang, Li; Madsen, Per; Su, Guosheng; Sørensen, Peter.

    MBG Annual PhD-days 2012. Aarhus University, 2012. p. 18-18.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsCommunication

  91. Published

    Network-enabled gene expression analysis. / Edwards, David; Wang, Lei; Sørensen, Peter.

    In: B M C Bioinformatics, Vol. 13, 167, 2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  92. Published

    Strategies for haplotype-based association mapping in complex pedigreed populations. / Boleckova, J; Christensen, Ole Fredslund; Sørensen, Peter; Sahana, Goutam.

    In: Czech Journal of Animal Science, Vol. 57, No. 1, 2012, p. 1-9.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  93. Published

    The Swedish-Danish Milk Genomics Initiative : Variation in milk phenotypes, effect on milk properties and underlying genetic influence in three Scandinavian breeds. / Larsen, Lotte Bach; Poulsen, Nina Aagaard; Jensen, Hanne Bak; Gustavsson, F.; Glantz, M.; Gregersen, Vivi Raundahl; Bertelsen, H.P.; Larsen, Mette Krogh; Sundekilde, Ulrik; Kragh, K.; Pedersen, K.S.; Bakman, M.; Nielsen, J.H.; Lindmark-Månsson, H.; Stålhammar, H.; Bertram, Hanne Christine S.; Sørensen, Peter; Buitenhuis, Albert Johannes; Bendixen, Christian; Andrén, A.; Paulsson, M.

    Proceedings from 9th International Symposium on Milk Genomics and Human Health. 2012. p. 17.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  94. 2011
  95. Published

    Using KEGG pathway information for genomic partitioning. / Høj-Edwards, Stefan McKinnon; Skarman, Axel; Jiang, Li; Madsen, Per; Su, Guosheng; Sørensen, Peter.

    2011. Poster session presented at Functional Genomics and Systems Biology 2011, Hinxton, Cambridge, UK, United Kingdom.

    Research output: Contribution to conferencePosterResearch

  96. Published

    General and family-specific gene expression responses to viral hemorrhagic septicaemia virus infection in rainbow trout (Oncorhynchus mykiss). / Jørgensen, Hanne Birgitte Hede; Sørensen, Peter; Cooper, G A; Lorenzen, E; Lorenzen, N; Hansen, Mette H H; Koop, B F; Henryon, Mark.

    In: Molecular Immunology, Vol. 48, No. 8, 04.2011, p. 1046-1058.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  97. Published

    In depth analysis of genes and pathways of the mammary gland involved in the pathogenesis of bovine Escherichia coli-mastitis. / Buitenhuis, Albert Johannes; Rontved, Christine M.; Edwards, Stefan McKinnon; Ingvartsen, Klaus Lønne; Sorensen, Peter.

    In: B M C Genomics, Vol. 12, 28.02.2011.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  98. Published

    Candidate Genes Detected in Transcriptome Studies are Strongly Dependent on Genetic Background. / Sarup, Pernille Merete; Sørensen, Jesper Givskov; Kristensen, Torsten Nygård; Hoffmann, Ary Anthony; Loeschcke, Volker; Paige, Ken N; Sørensen, Peter.

    In: P L o S One, Vol. 6, No. 1, 25.01.2011, p. 1-5.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  99. Published

    Flies selected for longevity retain a young gene expression profile. / Sarup, Pernille Merete; Sørensen, Peter; Loeschcke, Volker.

    In: Age (Omaha), Vol. 33, 2011, p. 69-80.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  100. Published

    Resequencing of Cattle QTL regions affecting udder health. Physiology and Genomics of Mastitis. / Vilkki, J; Tiirikka, T; Iso-Touru, T; Auvinen, P; Paulin, L; Laine, P; Sahana, Goutam; Lund, Mogens Sandø; Sørensen, Peter.

    2011. Abstract from Physiology and Genomics of Mastitis, Tutzingen, Germany.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  101. 2010
  102. Published

    A Transcriptome-Interactome Network of Protein Complexes Implicated in Bovine E.coli  Mastitis. / Sørensen, P; Skarman, A; Jiang, L; Ingvartsen, K L; Røntved, C M.

    Abstracts. Gesellschaft für Tierzuchtwissenschaften e. V., 2010. p. 125.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  103. Published

    A Transcriptome-Interactome Network of Protein Complexes Implicated in Bovine E.coli  Mastitis. / Sørensen, P; Skarman, A; Jiang, L; Ingvartsen, K L; Røntved, C M.

    CD communication - Proceeding, paper 886. Gesellschaft für Tierzuchtwissenschaften e. V., 2010.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsResearchpeer-review

  104. Published

    Bacteriological and clinical responsiveness to Escherichia coli-induced mastitis in dairy cows carrying haplotypes asscociated with high or low resistance to E. coli mastitis. / Røntved, Christine M.; Sørensen, Peter; Vilkki, Johanna; Sahana, Goutam; Sørensen, Lars Peter; Bjerring, Martin; Thomasen, Jørn Rind; Ingvartsen, Klaus Lønne; Lund, Mogens Sandø.

    Mastitis Research into Practice: Proceedings of the 5th IDF Mastitis Conference. ed. / JE Hillerton. VetLearn, 2010. p. 658-658.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  105. Published

    Bayesian Variable Selection of Pathway Gene Sets Applied to Gene Expression Micrroarray. / Skarman, A; Shariati, M M; Sørensen, P.

    Abstracts. Gesellschaft für Tierzuchtwissenschaften e. V., 2010. p. 123.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  106. Published

    Bayesian Variable Selection of Pathway Gene Sets Applied to Gene Expression Micrroarray. / Skarman, A; Shariati, M M; Sørensen, P.

    CD communication - Proceedings, paper 395. Gesellschaft für Tierzuchtwissenschaften e. V., 2010.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsResearchpeer-review

  107. Published

    Dietary fat-dependent transcriptional architecture and copy number alterations associated with modifiers of mammary cancer metastasis. / Gordon, Ryan A; Merrill, Michele La; Hunter, Kent W; Sørensen, Peter; Threadgill, David W; Pomp, Daniel.

    In: Clinical and Experimental Metastasis, Vol. 27, No. 5, 2010, p. 279-293.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  108. Published

    Exploring the Effect of pathogen Associated QTL on the Hepatic Acute Phase Response to Experimental E. Coli Mastitis using Hybrid Markov Network Modelling. / Edwards, D; Røntved, C M; Ingvartsen, K L; Sørensen, P.

    CD communication - Proceedings, paper 331. Gesellschaft für Tierzuchtwissenschaften e. V., 2010.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsResearchpeer-review

  109. Published

    Exploring the Effect of pathogen Associated QTL on the Hepatic Acute Phase Response to Experimental E. Coli Mastitis using Hybrid Markov Network Modelling. / Edwards, D; Røntved, C M; Ingvartsen, K L; Sørensen, P.

    Abstracts. Gesellschaft für Tierzuchtwissenschaften e. V., 2010. p. 113.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  110. Published

    Global Gene Expression of the Local Acute Phase Response to E. Coli  Infection in the Bovine Udder. / Buitenhuis, A J; Røntved, C M; Ingvartsen, K L; Sørensen, P.

    Abstracts. Gesellschaft für Tierzuchtwissenschaften e. V., 2010. p. 319.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  111. Published

    Global Gene Expression of the Local Acute Phase Response to E. Coli  Infection in the Bovine Udder. / Buitenhuis, A J; Røntved, C M; Ingvartsen, K L; Sørensen, P.

    CD communication - Proceedings, paper 250. Gesellschaft für Tierzuchtwissenschaften e. V., 2010.

    Research output: Contribution to book/anthology/report/proceedingArticle in proceedingsResearchpeer-review

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