Aarhus University Seal / Aarhus Universitets segl

Mikkel Heide Schierup

  1. 2022
  2. Published

    Incomplete lineage sorting and phenotypic evolution in marsupials. / Feng, Shaohong; Bai, Ming; Rivas-González, Iker et al.

    In: Cell, Vol. 185, No. 10, 05.2022, p. 1646-1660.e18.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  3. Published

    PRDM9 losses in vertebrates are coupled to those of paralogs ZCWPW1 and ZCWPW2. / Cavassim, Maria Izabel A.; Baker, Zachary; Hoge, Carla et al.

    In: PNAS (Proceedings of the National Academy of Sciences of the United States of America), Vol. 119, No. 9, e2114401119, 02.2022.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. Published

    The mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates. / Bergeron, Lucie A.; Besenbacher, Søren; Turner, Tychele N. et al.

    In: eLife, Vol. 11, e73577, 01.2022.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  5. 2021
  6. Published

    Different historical generation intervals in human populations inferred from Neanderthal fragment lengths and mutation signatures. / Coll Macià, Moisès; Skov, Laurits; Peter, Benjamin Marco et al.

    In: Nature Communications, Vol. 12, No. 1, 5317, 12.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  7. Published

    Recombination facilitates adaptive evolution in rhizobial soil bacteria. / Cavassim, Maria Izabel A; Andersen, Stig U; Bataillon, Thomas et al.

    In: Molecular Biology and Evolution, Vol. 38, No. 12, 12.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  8. Published

    Studying mutation rate evolution in primates-a need for systematic comparison of computational pipelines. / Bergeron, Lucie A.; Besenbacher, Søren; Schierup, Mikkel H. et al.

    In: GigaScience, Vol. 10, No. 10, giab072, 10.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperComment/debate/letter to the editorResearchpeer-review

  9. Published

    Evolutionary and biomedical insights from a marmoset diploid genome assembly. / Yang, Chentao; Zhou, Yang; Marcus, Stephanie et al.

    In: Nature, Vol. 594, No. 7862, 06.2021, p. 227-233.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  10. Published

    Small RNAs in Seminal Plasma as Novel Biomarkers for Germ Cell Tumors. / Mørup, Nina; Stakaitis, Rytis; Golubickaite, Ieva et al.

    In: Cancers, Vol. 13, No. 10, 2346, 05.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  11. Published

    The germline mutational process in rhesus macaque and its implications for phylogenetic dating. / Bergeron, Lucie A.; Besenbacher, Søren; Bakker, Jaco et al.

    In: GigaScience, Vol. 10, No. 5, giab029, 05.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  12. Published
  13. Published

    Evaluating genetic causes of azoospermia : What can we learn from a complex cellular structure and single-cell transcriptomics of the human testis? / Soraggi, Samuele; Riera Belles, Meritxell; Rajpert-De Meyts, Ewa et al.

    In: Human Genetics, Vol. 140, No. 1, 01.2021, p. 183-201.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  14. 2020
  15. Published

    The last pieces of a puzzling early meeting. / Schierup, Mikkel Heide.

    In: Science (New York, N.Y.), Vol. 369, No. 6511, 09.2020, p. 1565-1566.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  16. Published

    Integration and reanalysis of transcriptomics and methylomics data derived from blood and testis tissue of men with 47,XXY Klinefelter syndrome indicates the primary involvement of Sertoli cells in the testicular pathogenesis. / Winge, Sofia B.; Soraggi, Samuele; Schierup, Mikkel H. et al.

    In: American Journal of Medical Genetics. Part C: Seminars in Medical Genetics, Vol. 184, No. 2, 06.2020, p. 239-255.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  17. Published

    The nature of Neanderthal introgression revealed by 27,566 Icelandic genomes. / Skov, Laurits; Coll Macià, Moisès; Sveinbjörnsson, Garðar et al.

    In: Nature, Vol. 582, No. 7810, 06.2020, p. 78-83.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  18. Published

    Symbiosis genes show a unique pattern of introgression and selection within a Rhizobium leguminosarum species complex. / Cavassim, Maria Izabel A; Moeskjær, Sara; Moslemi, Camous et al.

    In: Microbial Genomics, Vol. 6, No. 4, 04.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  19. Published

    Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan. / Shah, Niraj; Wakabayashi, Tomomi; Kawamura, Yasuko et al.

    In: Nature Communications, Vol. 11, No. 1, 253, 2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. 2019
  21. Published

    Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry. / Walker, Jerilyn A.; Jordan, Vallmer E.; Storer, Jessica M. et al.

    In: Mobile DNA, Vol. 10, No. 1, 46, 26.11.2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  22. Published

    Breaking Free : The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover. / Griffiths, Andrew G.; Moraga, Roger; Tausen, Marni et al.

    In: The Plant Cell, Vol. 31, No. 7, 07.2019, p. 1466-1487.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  23. Published

    Evidence for Faster X Chromosome Evolution in Spiders. / Bechsgaard, Jesper; Schou, Mads Fristrup; Vanthournout, Bram et al.

    In: Molecular Biology and Evolution, Vol. 36, No. 6, 01.06.2019, p. 1281-1293.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  24. Published

    Direct estimation of mutations in great apes reconciles phylogenetic dating. / Besenbacher, Søren; Hvilsom, Christina; Marques-Bonet, Tomas et al.

    In: Nature Ecology & Evolution, Vol. 3, No. 2, 02.2019, p. 286-292.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  25. Published

    The comparative genomics and complex population history of Papio baboons. / Rogers, Jeffrey; Raveendran, Muthuswamy; Alan Harris, R. et al.

    In: Science Advances, Vol. 5, No. 1, 6947, 30.01.2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  26. Published

    Association mapping and disease : Evolutionary perspectives. / Besenbacher, Søren; Mailund, Thomas; Vilhjálmsson, Bjarni J. et al.

    Evolutionary genomics: Statistical and computational methods. ed. / Maria Anisimova. 2. ed. Springer, 2019. p. 533-553 (Methods in Molecular Biology, Vol. 1910).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearchpeer-review

  27. Published

    Selective single molecule sequencing and assembly of a human Y chromosome of African origin. / Kuderna, Lukas F. K.; Lizano, Esther; Julia, Eva et al.

    In: Nature Communications, Vol. 10, No. 1, 4, 2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  28. 2018
  29. Published

    Detecting archaic introgression using an unadmixed outgroup. / Skov, Laurits; Hui, Ruoyun; Shchur, Vladimir et al.

    In: PLOS Genetics, Vol. 14, No. 9, e1007641, 01.09.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  30. Published

    Transcriptome analysis of the adult human Klinefelter testis and cellularity-matched controls reveals disturbed differentiation of Sertoli- and Leydig cells article. / Winge, Sofia Boeg; Dalgaard, Marlene Danner; Belling, Kirstine G. et al.

    In: Cell Death and Disease, Vol. 9, No. 6, 586, 01.06.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  31. Published

    A computational reconstruction of Papio phylogeny using Alu insertion polymorphisms. / Jordan, Vallmer E.; Walker, Jerilyn A.; Beckstrom, Thomas O. et al.

    In: Mobile DNA, Vol. 9, No. 1, 13, 05.04.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  32. Published

    Analysis of lineage-specific Alu subfamilies in the genome of the olive baboon, Papio anubis. / The Baboon Genome Analysis Consortium.

    In: Mobile DNA, Vol. 9, No. 1, 10, 19.03.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  33. Published

    Dynamic Copy Number Evolution of X- and Y-Linked Ampliconic Genes in Human Populations. / Lucotte, Elise A; Skov, Laurits; Jensen, Jacob Malte et al.

    In: Genetics, Vol. 209, No. 3, 2018, p. 907-920.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  34. Published

    Transcriptome profiling of fetal Klinefelter testis tissue reveals a possible involvement of long non-coding RNAs in gonocyte maturation. / Winge, Sofia B; Dalgaard, Marlene D; Jensen, Jacob M et al.

    In: Human Molecular Genetics, Vol. 27, No. 3, 2018, p. 430-439.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  35. 2017
  36. Published

    Long-chain n-3 and n-6 polyunsaturated fatty acids and risk of atrial fibrillation : Results from a Danish cohort study. / Mortensen, Lotte Maxild; Lundbye-Christensen, Søren; Schmidt, Erik Berg et al.

    In: P L o S One, Vol. 12, No. 12, 22.12.2017, p. e0190262.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  37. Published

    A high-coverage Neandertal genome from Vindija Cave in Croatia. / Prüfer, Kay; de Filippo, Cesare; Grote, Steffi et al.

    In: Science, Vol. 358, No. 6363, 03.11.2017, p. 655-658.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  38. Published

    Alu insertion polymorphisms as evidence for population structure in baboons. / The Baboon Genome Analysis Consortium.

    In: Genome Biology and Evolution, Vol. 9, No. 9, 01.09.2017, p. 2418-2427.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  39. Published

    Assembly and analysis of 100 full MHC haplotypes from the Danish population. / Jensen, Jacob Malte; Villesen, Palle; Friborg, Rune M et al.

    In: Genome Research, 09.2017, p. 1597-1607.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  40. Published

    Evidence for Adaptive Introgression of Disease Resistance Genes Among Closely Related Arabidopsis Species. / Bechsgaard, Jesper; Jorgensen, Tove Hedegaard; Schierup, Mikkel Heide.

    In: G3: Genes, Genomes, Genetics (Bethesda), Vol. 7, No. 8, 07.08.2017, p. 2677-2683.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  41. Published

    Sequencing and de novo assembly of 150 genomes from Denmark as a population reference. / Maretty, Lasse; Jensen, Jacob Malte; Petersen, Bent et al.

    In: Nature, Vol. 548, 03.08.2017, p. 87-91.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  42. Published

    Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion. / Skov, Laurits; Schierup, Mikkel Heide; Danish Pan Genome Consortium.

    In: P L o S Genetics (Online), Vol. 13, No. 8, 1006834, 08.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  43. Published

    Transcriptome Analysis of the Response of Burmese Python to Digestion. / Duan, Jinjie; Sanggaard, Kristian Wejse; Schauser, Leif et al.

    In: GigaScience, Vol. 6, No. 8, 13.07.2017, p. 1-51.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  44. Published

    Papio baboon species indicative Alu elements. / The Baboon Genome Analysis Consortium.

    In: Genome Biology and Evolution, Vol. 9, No. 6, 01.06.2017, p. 1788-1796.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  45. Published

    Evidence that the rate of strong selective sweeps increases with population size in the great apes. / Nam, Kiwoong; Munch, Kasper; Mailund, Thomas et al.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 114, No. 7, 02.2017, p. 1613-1618.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  46. 2016
  47. Published

    Selective sweeps across twenty millions years of primate evolution. / Munch, Kasper; Nam, Kiwoong; Schierup, Mikkel Heide et al.

    In: Molecular Biology and Evolution, Vol. 33, No. 12, 22.09.2016, p. 3065-3074.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  48. Published

    Nationwide Genomic Study in Denmark Reveals Remarkable Population Homogeneity. / Athanasiadis, Georgios; Cheng, Jade Y; Vilhjálmsson, Bjarni J et al.

    In: Genetics, Vol. 204, No. 2, 17.08.2016, p. 711-722.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  49. Published

    High-resolution genetic maps of Lotus japonicus and L. burttii based on re-sequencing of recombinant inbred lines. / Shah, Niraj; Hirakawa, Hideki; Kusakabe, Shohei et al.

    In: D N A Research, Vol. 23, No. 5, 03.07.2016, p. 487-495.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  50. Published

    Demographic History of the Genus Pan Inferred from Whole Mitochondrial Genome Reconstructions. / Lobon, Irene; Tucci, Serena; de Manuel, Marc et al.

    In: Genome Biology and Evolution, Vol. 8, No. 6, 06.2016, p. 2020-2030.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  51. Published

    The Time Scale of Recombination Rate Evolution in Great Apes. / Stevison, Laurie S.; Woerner, August E.; Kidd, Jeffrey M. et al.

    In: Molecular Biology and Evolution, Vol. 33, No. 4, 04.2016, p. 928-945.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  52. Published

    A genomic history of Aboriginal Australia. / Malaspinas, Anna-Sapfo; Westaway, Michael C; Muller, Craig et al.

    In: Nature, Vol. 538, No. 7624, 2016, p. 207-214.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  53. Published

    Spitting for Science : Danish High School Students Commit to a Large-Scale Self-Reported Genetic Study. / Athanasiadis, Georgios; Jorgensen, Frank G.; Cheng, Jade Y. et al.

    In: P L o S One, Vol. 11, No. 8, e0161822, 2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  54. 2015
  55. Published

    Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores. / Vilhjálmsson, Bjarni J; Yang, Jian; Finucane, Hilary K et al.

    In: American Journal of Human Genetics, Vol. 97, No. 4, 01.10.2015, p. 576-92.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  56. Published

    Strong Selective Sweeps on the X Chromosome in the Human-Chimpanzee Ancestor Explain Its Low Divergence. / Dutheil, Julien Y; Munch, Kasper; Nam, Kiwoong et al.

    In: P L o S Genetics, Vol. 11, No. 8, 08.2015, p. e1005451.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  57. Published

    Extreme selective sweeps independently targeted the X chromosomes of the great apes. / Nam, Kiwoong; Munch, Kasper; Hobolth, Asger et al.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, No. 20, 04.05.2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  58. Published

    Inference of purifying and positive selection in three subspecies of chimpanzees (Pan troglodytes) from exome sequencing. / Bataillon, Thomas; Duan, Jinjie; Hvilsom, Christina et al.

    In: Genome Biology and Evolution, Vol. 7, No. 4, 04.2015, p. 1122-32.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  59. Published

    Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios. / Besenbacher, Søren; Liu, Siyang; Izarzugaza, José M G et al.

    In: Nature Communications, Vol. 6, 5969, 2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  60. 2014
  61. Published

    Whole-genome analyses resolve early branches in the tree of life of modern birds. / Jarvis, Erich D; Mirarab, Siavash; Aberer, Andre J et al.

    In: Science, Vol. 346, No. 6215, 12.12.2014, p. 1320-31.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  62. Published

    Unraveling recombination rate evolution using ancestral recombination maps. / Munch, Kasper; Schierup, Mikkel H; Mailund, Thomas.

    In: BioEssays, Vol. 36, No. 9, 14.07.2014, p. 892-900.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  63. Published

    Strong selective sweeps associated with ampliconic regions in great ape X chromosomes. / Nam, Kiwoong; Munch, Kasper; Hobolth, Asger et al.

    In: arXiv, 24.02.2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearch

  64. Published

    Variation and association to diabetes in 2000 full mtDNA sequences mined from an exome study in a Danish population. / Li, Shengting; Besenbacher, Soren; Li, Yingrui et al.

    In: European Journal of Human Genetics, 22.01.2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  65. Published

    Lineage sorting in apes. / Mailund, Thomas; Munch, Kasper; Schierup, Mikkel Heide.

    In: Annual Review of Genetics, Vol. 48, 01.01.2014, p. 519-535.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  66. Published

    A fine-scale recombination map of the human-chimpanzee ancestor reveals faster change in humans than in chimpanzees and a strong impact of GC-biased gene conversion. / Munch, Kasper; Mailund, Thomas; Dutheil, Julien Y et al.

    In: Genome Research, 2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  67. Published

    Identifying disease associated genes by network propagation. / Qian, Yu; Besenbacher, Soren; Mailund, Thomas et al.

    In: B M C Systems Biology, Vol. 8, No. Suppl 1, 2014, p. S6.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperConference abstract in journalResearch

  68. Published

    Inferring the Process of Human–Chimpanzee Speciation. / Mailund, Thomas; Munch, Kasper; Schierup, Mikkel Heide.

    Encyclopedia of Life Sciences. Wiley, 2014.

    Research output: Contribution to book/anthology/report/proceedingReviewResearch

  69. Published

    Spider genomes provide insight into composition and evolution of venom and silk. / Sanggaard, Kristian W; Bechsgaard, Jesper S; Fang, Xiaodong et al.

    In: Nature Communications, Vol. 5, 3765, 2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  70. 2013
  71. Published

    Hvor kommer du fra? En undersøgelse af danskernes genetiske historie. / Jørgensen, Frank Grønlund; Mailund, Thomas; Schierup, Mikkel Heide et al.

    In: Biofag, Vol. 3, 08.2013, p. 18-20.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleCommunication

  72. Published

    Great ape genetic diversity and population history. / Prado-Martinez, Javier; Sudmant, Peter H; Kidd, Jeffrey M et al.

    In: Nature, Vol. 499, 2013, p. 471–475.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  73. Published

    SOAPindel: efficient identification of indels from short paired reads. / Li, Shengting; Li, Ruiqiang; Li, Heng et al.

    In: Genome Research, Vol. 23, No. 1, 2013, p. 195-200.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  74. 2012
  75. Published

    DNA Topoisomerases Maintain Promoters in a State Competent for Transcriptional Activation in Saccharomyces cerevisiae. / Pedersen, Jakob Madsen; Fredsøe, Jacob Christian; Rødgaard, Morten Terpager et al.

    In: P L o S Genetics, Vol. 8, No. 12 e1003128, 20.12.2012, p. 1-15.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  76. Published

    Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species. / Stukenbrock, Eva H; Christiansen, Freddy Bugge; Hansen, Troels Toftebjerg et al.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 107, No. 27, 03.07.2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  77. Published

    A New Isolation with Migration Model along Complete Genomes Infers Very Different Divergence Processes among Closely Related Great Ape Species. / Mailund, Thomas; Halager, Anders E; Westergaard, Michael et al.

    In: P L o S Genetics, Vol. 8, No. 12, 2012, p. e1003125.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  78. Published

    An effort to use human-based exome capture methods to analyze chimpanzee and macaque exomes. / Jin, Xin; He, Mingze; Ferguson, Betsy et al.

    In: P L o S One, Vol. 7, No. 7, 2012, p. e40637.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  79. Published

    Association mapping and disease : evolutionary perspectives. / Besenbacher, Søren; Mailund, Thomas; Schierup, Mikkel H.

    In: Methods in Molecular Biology, Vol. 856, 2012, p. 275-91.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  80. Published

    Extensive X-linked adaptive evolution in central chimpanzees. / Hvilsom, Christina; Qian, Yu; Bataillon, Thomas et al.

    In: Proceedings of the National Academy of Sciences of the United States of America, 2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  81. Published

    Insights into hominid evolution from the gorilla genome sequence. / Scally, Aylwyn; Dutheil, Julien Y; Hillier, LaDeana W et al.

    In: Nature, Vol. 483, No. 7388, 2012, p. 169-75.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  82. Published

    Ortholog genes identified by transcriptome sequencing in the spider genus Stegodyphus. / Mattila, Tiina; Bechsgaard, Jesper Smærup; Hansen, Troels et al.

    In: B M C Genomics, Vol. 13, No. 70, 2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  83. Published

    The bonobo genome compared with the chimpanzee and human genomes. / Prüfer, Kay; Munch, Kasper; Hellmann, Ines et al.

    In: Nature, Vol. 486, No. 7404, 2012, p. 527-31.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  84. 2011
  85. Published

    Genomic determinants of protein evolution and polymorphism in Arabidopsis. / Slotte, Tanja; Bataillon, Thomas; Hansen, Troels T et al.

    In: Genome Biology and Evolution, Vol. 3, 16.09.2011, p. 1210-1219.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  86. Published

    Depletion of the RNA exosome triggers hypermethylation of human promoters. / Mapendano, Christophe Kamungu; Preker, Pascal; Villesen, P et al.

    2011. Abstract from Third EMBO meeting on 'Chromatin and Epigenetics, Heidelberg, Germany.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  87. Published

    Comparative and demographic analysis of orang-utan genomes. / Locke, Devin P.; Hillier, LaDeana W.; Warren, Wesley C. et al.

    In: Nature, Vol. 469, 2011, p. 529-533.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  88. Published

    Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model. / Mailund, Thomas; Dutheil, Julien; Hobolth, Asger et al.

    In: P L o S Genetics, Vol. 7, No. 3, 2011.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  89. Published

    Incomplete lineage sorting patterns among human, chimpanzee and orangutan suggest recent orangutan speciation and widespread selection. / Hobolth, Asger; Dutheil, Julien; Hawks, John et al.

    In: Genome Research, Vol. 21, No. 3, 2011, p. 349-356.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  90. Published

    Symposium on Biodiversity in the Silicon Age - Abstracts. / Balslev, Henrik (Editor); Arge, Lars Allan (Editor); Svenning, J.-C. (Editor) et al.

    The Royal Danish Academy of Sciences and Letters, 2011. 32 p.

    Research output: Book/anthology/dissertation/reportAnthologyResearch

  91. Published

    The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species. / Stukenbrock, Eva H; Bataillon, Thomas; Dutheil, Julien Y et al.

    In: Genome Research, Vol. 21, 2011, p. 2157-2166.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  92. 2010
  93. Published

    Whole-genome and chromosome evolution associated with host adaptation and speciation of the wheat pathogen Mycosphaerella graminicola. / Stukenbrock, Eva; Jørgensen, Frank; Zala, Marcello et al.

    In: P L o S Genetics, Vol. 23, No. 6, 23.12.2010.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  94. Published

    Insertion and deletion processes in recent human history. / Sjödin, Per; Bataillon, Thomas; Schierup, Mikkel H.

    In: P L o S One, Vol. 5, No. 1, 2010, p. e8650.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  95. Published

    Molecular evolution within and between self-incompatibility specificities. / Castric, V; Bechsgaard, J S; Grenier, S et al.

    In: Molecular Biology and Evolution, Vol. 27, No. 1, 2010, p. 11-20.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  96. Published

    The coalescent in bacterial populations. / Schierup, Mikkel Heide; Wiuf, Carsten Henrik.

    Bacterial population genetics in infectious disease. ed. / D. Ashley Robinson; Daniel Falush; Edward J. Feil. United States : Wiley-Blackwell, 2010. p. 3-19.

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearchpeer-review

  97. 2009
  98. Published

    Ancestral population genomics : the coalescent hidden Markov model approach. / Dutheil, Julien; Ganapathy, Ganesh; Hobolth, Asger et al.

    In: Genetics, Vol. 183, No. 1, 2009, p. 259–274.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  99. Published

    Expression of distinct self-incompatibility specificities in Arabidopsis thaliana. / Boggs, Nathan A; Dwyer, Kathleen G; Shah, Paurush et al.

    In: Genetics, Vol. 182, No. 4, 2009, p. 1313-21.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  100. Published

    Haplotype frequencies in a sub-region of chromosome 19q13.3, related to risk and prognosis of cancer, differ dramatically between ethnic groups. / Schierup, Mikkel H; Mailund, Thomas; Li, Heng et al.

    In: B M C Medical Genetics, Vol. 10, 2009, p. 20.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  101. Published

    Increased rate of human mutations where DNA and RNA polymerases collide. / Jørgensen, Frank Grønlund; Schierup, Mikkel H.

    In: Trends in Genetics, Vol. 25, No. 12, 2009, p. 523-527.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  102. Published

    Local phylogeny mapping of quantitative traits: Higher accuracy and better ranking than single marker association in genomewide scans. / Besenbacher, Søren; Mailund, Thomas; Schierup, Mikkel Heide.

    In: Genetics, Vol. 181, 2009, p. 747-753.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  103. Published

    RNA polymerase plays both sides: Vivid and bidirectional transcription around and upstream of active promoters. / Preker, Pascal; Nielsen, Jesper; Schierup, Mikkel Heide et al.

    In: Cell Cycle, Vol. 8, No. 8, 2009, p. 1106-1107.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearch

  104. Published

    Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck. / Guo, Ya-Long; Bechsgaard, Jesper S; Slotte, Tanja et al.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 13, 2009, p. 5246-51.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  105. Published

    Using biological networks to search for interacting loci in genomewide association studies. / Emily, Mathieu; Mailund, Thomas; Hein, Jotun et al.

    In: European Journal of Human Genetics, 2009.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  106. 2008
  107. Published

    RNA Exosome Depletion Reveals Transcription Upstream of Active Human Promoters. / Preker, Pascal; Nielsen, Jesper; Kammler, Susanne et al.

    In: Science, Vol. 322, No. 5909, 19.12.2008, p. 1851-1854.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  108. Published

    Genomic consequences of selection on self-incompatibility genes. / Schierup, Mikkel Heide; Vekemans, Xavier.

    In: Current Opinion in Plant Biology, 2008, p. 116-122.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  109. Published

    Local Phylogeny Mapping of Quantitative Traits: Higher Accuracy and Better Ranking Than Single Marker Association in Genomewide Scans. / Besenbacher, Søren; Mailund, Thomas; Schierup, Mikkel H.

    In: Genetics, 2008.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  110. Published

    Repeated adaptive introgression at a gene under multiallelic balancing selection. / Castric, Vincent; Bechsgaard, Jesper Smærup; Schierup, Mikkel Heide et al.

    In: P L o S Genetics, 2008.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  111. Published

    Repeated adaptive introgression at a gene under multiallelic balancing selection. / Castric, Vincent; Bechsgaard, Jesper; Schierup, Mikkel H et al.

    In: P L o S Genetics, Vol. 4, No. 8, 2008, p. e1000168.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  112. Published

    Selection at work in self-incompatible Arabidopsis lyrata. II. Spatial distribution of S haplotypes in Iceland. / Schierup, Mikkel H; Bechsgaard, Jesper S; Christiansen, Freddy Bugge.

    In: Genetics, Vol. 180, No. 2, 2008, p. 1051-9.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  113. Published

    Transmission ratio distortion in Arabidopsis lyrata: effects of population divergence and the S-locus. / Leppälä, J.; Bechsgaard, Jesper Smærup; Schierup, Mikkel Heide et al.

    In: Heredity, Vol. 100, 2008, p. 71-78.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  114. Published

    When gametophytic self-incompatibility meets gynodioecy. / Ehlers, Bodil; Schierup, Mikkel H.

    In: Genetics Research, Vol. 90, No. 1, 2008, p. 27-35.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  115. 2007
  116. Published

    Genetic structure, lack of sex-biased dispersal and behavioral flexibility in the pair-living fat-tailed dwarf lemur, Cheirogaleus medius. / Fredsted, Tina; Schierup, Mikkel Heide; Groenevald, Linn F et al.

    In: Behavioral Ecology and Sociobiology, 2007.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

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