Aarhus University Seal

Mikkel Heide Schierup

  1. 2023
  2. Published
    Characterizing the evolution and phenotypic impact of ampliconic Y chromosome regions. / Lucotte, Elise A.; Guðmundsdóttir, Valdís Björt; Jensen, Jacob M. et al.
    In: Nature Communications, Vol. 14, No. 1, 3990, 07.2023.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  3. Published
    Eighty million years of rapid evolution of the primate Y chromosome. / Zhou, Yang; Zhan, Xiaoyu; Jin, Jiazheng et al.
    In: Nature Ecology and Evolution, Vol. 7, No. 7, 07.2023, p. 1114-1130.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. Published
    A global catalog of whole-genome diversity from 233 primate species. / Kuderna, Lukas F.K.; Gao, Hong; Janiak, Mareike C. et al.
    In: Science, Vol. 380, No. 6648, 06.2023, p. 906-913.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  5. Published
    Comparative genomics reveals the hybrid origin of a macaque group. / Zhang, Bao Lin; Chen, Wu; Wang, Zefu et al.
    In: Science Advances, Vol. 9, No. 22, eadd3580, 06.2023.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  6. Published
    Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons. / Sørensen, Erik F.; Harris, R. Alan; Zhang, Liye et al.
    In: Science (New York, N.Y.), Vol. 380, No. 6648, eabn8153, 06.2023.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  7. Published
    Pervasive incomplete lineage sorting illuminates speciation and selection in primates. / Rivas-González, Iker; Rousselle, Marjolaine; Li, Fang et al.
    In: Science, Vol. 380, No. 6648, eabn4409, 06.2023, p. eabn4409.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  8. Published
    Phylogenomic analyses provide insights into primate evolution. / Shao, Yong; Zhou, Long; Li, Fang et al.
    In: Science (New York, N.Y.), Vol. 380, No. 6648, 06.2023, p. 913-924.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  9. Published
    The landscape of tolerated genetic variation in humans and primates. / Gao, Hong; Hamp, Tobias; Ede, Jeffrey et al.
    In: Science (New York, N.Y.), Vol. 380, No. 6648, abn8197, 06.2023.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  10. Published
    Extraordinary selection on the human X chromosome associated with archaic admixture. / Skov, Laurits; Coll Macià, Moisès; Lucotte, Elise Anne et al.
    In: Cell Genomics, Vol. 3, No. 3, 100274, 03.2023.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  11. Published
    The molecular evolution of spermatogenesis across mammals. / Murat, Florent ; Mbengue, Noe; Winge, Sofia et al.
    In: Nature, Vol. 613, No. 7943, 2023, p. 308-316.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  12. 2022
  13. Published
    Evolutionary dynamics of pseudoautosomal region 1 in humans and great apes. / Bergman, Juraj; Schierup, Mikkel Heide.
    In: Genome Biology, Vol. 23, 215, 10.2022.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  14. Published
    Incomplete lineage sorting and phenotypic evolution in marsupials. / Feng, Shaohong; Bai, Ming; Rivas-González, Iker et al.
    In: Cell, Vol. 185, No. 10, 05.2022, p. 1646-1660.e18.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  15. Published
    PRDM9 losses in vertebrates are coupled to those of paralogs ZCWPW1 and ZCWPW2. / Cavassim, Maria Izabel A.; Baker, Zachary; Hoge, Carla et al.
    In: PNAS (Proceedings of the National Academy of Sciences of the United States of America), Vol. 119, No. 9, e2114401119, 02.2022.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  16. Published
    The mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates. / Bergeron, Lucie A.; Besenbacher, Søren; Turner, Tychele N. et al.
    In: eLife, Vol. 11, e73577, 01.2022.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  17. 2021
  18. Published
    Different historical generation intervals in human populations inferred from Neanderthal fragment lengths and mutation signatures. / Coll Macià, Moisès; Skov, Laurits; Peter, Benjamin Marco et al.
    In: Nature Communications, Vol. 12, No. 1, 5317, 12.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  19. Published
    Recombination facilitates adaptive evolution in rhizobial soil bacteria. / Cavassim, Maria Izabel A; Andersen, Stig U; Bataillon, Thomas et al.
    In: Molecular Biology and Evolution, Vol. 38, No. 12, 12.2021, p. 5480-5490.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. Published
    Studying mutation rate evolution in primates-a need for systematic comparison of computational pipelines. / Bergeron, Lucie A.; Besenbacher, Søren; Schierup, Mikkel H. et al.
    In: GigaScience, Vol. 10, No. 10, giab072, 10.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperComment/debate/letter to the editorResearchpeer-review

  21. Published
    Evolutionary and biomedical insights from a marmoset diploid genome assembly. / Yang, Chentao; Zhou, Yang; Marcus, Stephanie et al.
    In: Nature, Vol. 594, No. 7862, 06.2021, p. 227-233.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  22. Published
    Small RNAs in Seminal Plasma as Novel Biomarkers for Germ Cell Tumors. / Mørup, Nina; Stakaitis, Rytis; Golubickaite, Ieva et al.
    In: Cancers, Vol. 13, No. 10, 2346, 05.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  23. Published
    The germline mutational process in rhesus macaque and its implications for phylogenetic dating. / Bergeron, Lucie A.; Besenbacher, Søren; Bakker, Jaco et al.
    In: GigaScience, Vol. 10, No. 5, giab029, 05.2021.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  24. Published
  25. Published
    Evaluating genetic causes of azoospermia: What can we learn from a complex cellular structure and single-cell transcriptomics of the human testis? / Soraggi, Samuele; Riera Belles, Meritxell; Rajpert-De Meyts, Ewa et al.
    In: Human Genetics, Vol. 140, No. 1, 01.2021, p. 183-201.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  26. 2020
  27. Published
    The last pieces of a puzzling early meeting. / Schierup, Mikkel Heide.
    In: Science (New York, N.Y.), Vol. 369, No. 6511, 09.2020, p. 1565-1566.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  28. Published
    Integration and reanalysis of transcriptomics and methylomics data derived from blood and testis tissue of men with 47,XXY Klinefelter syndrome indicates the primary involvement of Sertoli cells in the testicular pathogenesis. / Winge, Sofia B.; Soraggi, Samuele; Schierup, Mikkel H. et al.
    In: American Journal of Medical Genetics. Part C: Seminars in Medical Genetics, Vol. 184, No. 2, 06.2020, p. 239-255.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  29. Published
    The nature of Neanderthal introgression revealed by 27,566 Icelandic genomes. / Skov, Laurits; Coll Macià, Moisès; Sveinbjörnsson, Garðar et al.
    In: Nature, Vol. 582, No. 7810, 06.2020, p. 78-83.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  30. Published
    Symbiosis genes show a unique pattern of introgression and selection within a Rhizobium leguminosarum species complex. / Cavassim, Maria Izabel A; Moeskjær, Sara; Moslemi, Camous et al.
    In: Microbial Genomics, Vol. 6, No. 4, 000351, 04.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  31. Published
    Extreme genetic signatures of local adaptation during Lotus japonicus colonization of Japan. / Shah, Niraj; Wakabayashi, Tomomi; Kawamura, Yasuko et al.
    In: Nature Communications, Vol. 11, No. 1, 253, 2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  32. 2019
  33. Published
    Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry. / Walker, Jerilyn A.; Jordan, Vallmer E.; Storer, Jessica M. et al.
    In: Mobile DNA, Vol. 10, No. 1, 46, 26.11.2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  34. Published
    Breaking Free: The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover. / Griffiths, Andrew G.; Moraga, Roger; Tausen, Marni et al.
    In: The Plant Cell, Vol. 31, No. 7, 07.2019, p. 1466-1487.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  35. Published
    Evidence for Faster X Chromosome Evolution in Spiders. / Bechsgaard, Jesper; Schou, Mads Fristrup; Vanthournout, Bram et al.
    In: Molecular Biology and Evolution, Vol. 36, No. 6, 01.06.2019, p. 1281-1293.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  36. Published
    Direct estimation of mutations in great apes reconciles phylogenetic dating. / Besenbacher, Søren; Hvilsom, Christina; Marques-Bonet, Tomas et al.
    In: Nature Ecology & Evolution, Vol. 3, No. 2, 02.2019, p. 286-292.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  37. Published
    The comparative genomics and complex population history of Papio baboons. / Rogers, Jeffrey; Raveendran, Muthuswamy; Alan Harris, R. et al.
    In: Science Advances, Vol. 5, No. 1, 6947, 30.01.2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  38. Published
    Association mapping and disease: Evolutionary perspectives. / Besenbacher, Søren; Mailund, Thomas; Vilhjálmsson, Bjarni J. et al.
    Evolutionary genomics: Statistical and computational methods. ed. / Maria Anisimova. 2. ed. Springer, 2019. p. 533-553 (Methods in Molecular Biology, Vol. 1910).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearchpeer-review

  39. Published
    Selective single molecule sequencing and assembly of a human Y chromosome of African origin. / Kuderna, Lukas F. K.; Lizano, Esther; Julia, Eva et al.
    In: Nature Communications, Vol. 10, No. 1, 4, 2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  40. 2018
  41. Published
    Detecting archaic introgression using an unadmixed outgroup. / Skov, Laurits; Hui, Ruoyun; Shchur, Vladimir et al.
    In: PLOS Genetics, Vol. 14, No. 9, e1007641, 01.09.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  42. Published
    Transcriptome analysis of the adult human Klinefelter testis and cellularity-matched controls reveals disturbed differentiation of Sertoli- and Leydig cells article. / Winge, Sofia Boeg; Dalgaard, Marlene Danner; Belling, Kirstine G. et al.
    In: Cell Death and Disease, Vol. 9, No. 6, 586, 01.06.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  43. Published
    A computational reconstruction of Papio phylogeny using Alu insertion polymorphisms. / Jordan, Vallmer E.; Walker, Jerilyn A.; Beckstrom, Thomas O. et al.
    In: Mobile DNA, Vol. 9, No. 1, 13, 05.04.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  44. Published
    Analysis of lineage-specific Alu subfamilies in the genome of the olive baboon, Papio anubis. / The Baboon Genome Analysis Consortium.
    In: Mobile DNA, Vol. 9, No. 1, 10, 19.03.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  45. Published
    Dynamic Copy Number Evolution of X- and Y-Linked Ampliconic Genes in Human Populations. / Lucotte, Elise A; Skov, Laurits; Jensen, Jacob Malte et al.
    In: Genetics, Vol. 209, No. 3, 2018, p. 907-920.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  46. Published
    Transcriptome profiling of fetal Klinefelter testis tissue reveals a possible involvement of long non-coding RNAs in gonocyte maturation. / Winge, Sofia B; Dalgaard, Marlene D; Jensen, Jacob M et al.
    In: Human Molecular Genetics, Vol. 27, No. 3, 2018, p. 430-439.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  47. 2017
  48. Published
    Long-chain n-3 and n-6 polyunsaturated fatty acids and risk of atrial fibrillation: Results from a Danish cohort study. / Mortensen, Lotte Maxild; Lundbye-Christensen, Søren; Schmidt, Erik Berg et al.
    In: P L o S One, Vol. 12, No. 12, e0190262, 22.12.2017, p. e0190262.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  49. Published
    A high-coverage Neandertal genome from Vindija Cave in Croatia. / Prüfer, Kay; de Filippo, Cesare; Grote, Steffi et al.
    In: Science, Vol. 358, No. 6363, 03.11.2017, p. 655-658.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  50. Published
    Alu insertion polymorphisms as evidence for population structure in baboons. / The Baboon Genome Analysis Consortium.
    In: Genome Biology and Evolution, Vol. 9, No. 9, 01.09.2017, p. 2418-2427.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  51. Published
    Assembly and analysis of 100 full MHC haplotypes from the Danish population. / Jensen, Jacob Malte; Villesen, Palle; Friborg, Rune M et al.
    In: Genome Research, Vol. 27, No. 9, 09.2017, p. 1597-1607.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  52. Published
    Evidence for Adaptive Introgression of Disease Resistance Genes Among Closely Related Arabidopsis Species. / Bechsgaard, Jesper; Jorgensen, Tove Hedegaard; Schierup, Mikkel Heide.
    In: G3: Genes, Genomes, Genetics (Bethesda), Vol. 7, No. 8, 07.08.2017, p. 2677-2683.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  53. Published
    Sequencing and de novo assembly of 150 genomes from Denmark as a population reference. / Maretty, Lasse; Jensen, Jacob Malte; Petersen, Bent et al.
    In: Nature, Vol. 548, No. 7665, 03.08.2017, p. 87-91.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  54. Published
    Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion. / Skov, Laurits; Schierup, Mikkel Heide; Danish Pan Genome Consortium.
    In: P L o S Genetics (Online), Vol. 13, No. 8, 1006834, 08.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  55. Published
    Transcriptome Analysis of the Response of Burmese Python to Digestion. / Duan, Jinjie; Sanggaard, Kristian Wejse; Schauser, Leif et al.
    In: GigaScience, Vol. 6, No. 8, gix057, 13.07.2017, p. 1-51.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  56. Published
    Papio baboon species indicative Alu elements. / The Baboon Genome Analysis Consortium.
    In: Genome Biology and Evolution, Vol. 9, No. 6, 01.06.2017, p. 1788-1796.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  57. Published
    Evidence that the rate of strong selective sweeps increases with population size in the great apes. / Nam, Kiwoong; Munch, Kasper; Mailund, Thomas et al.
    In: Proceedings of the National Academy of Sciences, Vol. 114, No. 7, 02.2017, p. 1613-1618.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  58. 2016
  59. Published
    Selective sweeps across twenty millions years of primate evolution. / Munch, Kasper; Nam, Kiwoong; Schierup, Mikkel Heide et al.
    In: Molecular Biology and Evolution, Vol. 33, No. 12, 22.09.2016, p. 3065-3074.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  60. Published
    Nationwide Genomic Study in Denmark Reveals Remarkable Population Homogeneity. / Athanasiadis, Georgios; Cheng, Jade Y; Vilhjálmsson, Bjarni J et al.
    In: Genetics, Vol. 204, No. 2, 17.08.2016, p. 711-722.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  61. Published
    High-resolution genetic maps of Lotus japonicus and L. burttii based on re-sequencing of recombinant inbred lines. / Shah, Niraj; Hirakawa, Hideki; Kusakabe, Shohei et al.
    In: D N A Research, Vol. 23, No. 5, 03.07.2016, p. 487-495.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  62. Published
    Demographic History of the Genus Pan Inferred from Whole Mitochondrial Genome Reconstructions. / Lobon, Irene; Tucci, Serena; de Manuel, Marc et al.
    In: Genome Biology and Evolution, Vol. 8, No. 6, 06.2016, p. 2020-2030.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  63. Published
    The Time Scale of Recombination Rate Evolution in Great Apes. / Stevison, Laurie S.; Woerner, August E.; Kidd, Jeffrey M. et al.
    In: Molecular Biology and Evolution, Vol. 33, No. 4, 04.2016, p. 928-945.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  64. Published
    A genomic history of Aboriginal Australia. / Malaspinas, Anna-Sapfo; Westaway, Michael C; Muller, Craig et al.
    In: Nature, Vol. 538, No. 7624, 2016, p. 207-214.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  65. Published
    Spitting for Science: Danish High School Students Commit to a Large-Scale Self-Reported Genetic Study. / Athanasiadis, Georgios; Jorgensen, Frank G.; Cheng, Jade Y. et al.
    In: P L o S One, Vol. 11, No. 8, e0161822, 2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  66. 2015
  67. Published
    Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores. / Vilhjálmsson, Bjarni J; Yang, Jian; Finucane, Hilary K et al.
    In: American Journal of Human Genetics, Vol. 97, No. 4, 01.10.2015, p. 576-92.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  68. Published
    Strong Selective Sweeps on the X Chromosome in the Human-Chimpanzee Ancestor Explain Its Low Divergence. / Dutheil, Julien Y; Munch, Kasper; Nam, Kiwoong et al.
    In: P L o S Genetics, Vol. 11, No. 8, 08.2015, p. e1005451.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  69. Published
    Extreme selective sweeps independently targeted the X chromosomes of the great apes. / Nam, Kiwoong; Munch, Kasper; Hobolth, Asger et al.
    In: Proceedings of the National Academy of Sciences, Vol. 112, No. 20, 04.05.2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  70. Published
    Inference of purifying and positive selection in three subspecies of chimpanzees (Pan troglodytes) from exome sequencing. / Bataillon, Thomas; Duan, Jinjie; Hvilsom, Christina et al.
    In: Genome Biology and Evolution, Vol. 7, No. 4, 04.2015, p. 1122-32.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  71. Published
    Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios. / Besenbacher, Søren; Liu, Siyang; Izarzugaza, José M G et al.
    In: Nature Communications, Vol. 6, 5969, 2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  72. 2014
  73. Published
    Whole-genome analyses resolve early branches in the tree of life of modern birds. / Jarvis, Erich D; Mirarab, Siavash; Aberer, Andre J et al.
    In: Science, Vol. 346, No. 6215, 12.12.2014, p. 1320-31.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  74. Published
    Unraveling recombination rate evolution using ancestral recombination maps. / Munch, Kasper; Schierup, Mikkel H; Mailund, Thomas.
    In: BioEssays, Vol. 36, No. 9, 14.07.2014, p. 892-900.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  75. Published
    Strong selective sweeps associated with ampliconic regions in great ape X chromosomes. / Nam, Kiwoong; Munch, Kasper; Hobolth, Asger et al.
    In: arXiv, 24.02.2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearch

  76. Published
    Variation and association to diabetes in 2000 full mtDNA sequences mined from an exome study in a Danish population. / Li, Shengting; Besenbacher, Soren; Li, Yingrui et al.
    In: European Journal of Human Genetics, 22.01.2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  77. Published
    Lineage sorting in apes. / Mailund, Thomas; Munch, Kasper; Schierup, Mikkel Heide.
    In: Annual Review of Genetics, Vol. 48, 01.01.2014, p. 519-535.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  78. Published
    A fine-scale recombination map of the human-chimpanzee ancestor reveals faster change in humans than in chimpanzees and a strong impact of GC-biased gene conversion. / Munch, Kasper; Mailund, Thomas; Dutheil, Julien Y et al.
    In: Genome Research, 2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  79. Published
    Identifying disease associated genes by network propagation. / Qian, Yu; Besenbacher, Soren; Mailund, Thomas et al.
    In: B M C Systems Biology, Vol. 8, No. Suppl 1, 2014, p. S6.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperConference abstract in journalResearch

  80. Published
    Inferring the Process of Human–Chimpanzee Speciation. / Mailund, Thomas; Munch, Kasper; Schierup, Mikkel Heide.
    Encyclopedia of Life Sciences. Wiley, 2014.

    Research output: Contribution to book/anthology/report/proceedingReview

  81. Published
    Spider genomes provide insight into composition and evolution of venom and silk. / Sanggaard, Kristian W; Bechsgaard, Jesper S; Fang, Xiaodong et al.
    In: Nature Communications, Vol. 5, 3765, 2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  82. 2013
  83. Published
    Hvor kommer du fra? En undersøgelse af danskernes genetiske historie. / Jørgensen, Frank Grønlund; Mailund, Thomas; Schierup, Mikkel Heide et al.
    In: Biofag, Vol. 3, 08.2013, p. 18-20.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleCommunication

  84. Published
    Great ape genetic diversity and population history. / Prado-Martinez, Javier; Sudmant, Peter H; Kidd, Jeffrey M et al.
    In: Nature, Vol. 499, 2013, p. 471–475.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  85. Published
    SOAPindel: efficient identification of indels from short paired reads. / Li, Shengting; Li, Ruiqiang; Li, Heng et al.
    In: Genome Research, Vol. 23, No. 1, 2013, p. 195-200.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  86. 2012
  87. Published
    DNA Topoisomerases Maintain Promoters in a State Competent for Transcriptional Activation in Saccharomyces cerevisiae. / Pedersen, Jakob Madsen; Fredsøe, Jacob Christian; Rødgaard, Morten Terpager et al.
    In: P L o S Genetics, Vol. 8, No. 12 e1003128, 20.12.2012, p. 1-15.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  88. Published
    Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen species. / Stukenbrock, Eva H; Christiansen, Freddy Bugge; Hansen, Troels Toftebjerg et al.
    In: Proceedings of the National Academy of Sciences, Vol. 107, No. 27, 03.07.2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  89. Published
    An effort to use human-based exome capture methods to analyze chimpanzee and macaque exomes. / Jin, Xin; He, Mingze; Ferguson, Betsy et al.
    In: P L o S One, Vol. 7, No. 7, 2012, p. e40637.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  90. Published
    A New Isolation with Migration Model along Complete Genomes Infers Very Different Divergence Processes among Closely Related Great Ape Species. / Mailund, Thomas; Halager, Anders E; Westergaard, Michael et al.
    In: P L o S Genetics, Vol. 8, No. 12, 2012, p. e1003125.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  91. Published
    Association mapping and disease: evolutionary perspectives. / Besenbacher, Søren; Mailund, Thomas; Schierup, Mikkel H.
    In: Methods in Molecular Biology, Vol. 856, 2012, p. 275-91.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  92. Published
    Extensive X-linked adaptive evolution in central chimpanzees. / Hvilsom, Christina; Qian, Yu; Bataillon, Thomas et al.
    In: Proceedings of the National Academy of Sciences, 2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  93. Published
    Insights into hominid evolution from the gorilla genome sequence. / Scally, Aylwyn; Dutheil, Julien Y; Hillier, LaDeana W et al.
    In: Nature, Vol. 483, No. 7388, 2012, p. 169-75.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  94. Published
    Ortholog genes identified by transcriptome sequencing in the spider genus Stegodyphus. / Mattila, Tiina; Bechsgaard, Jesper Smærup; Hansen, Troels et al.
    In: B M C Genomics, Vol. 13, No. 70, 2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  95. Published
    The bonobo genome compared with the chimpanzee and human genomes. / Prüfer, Kay; Munch, Kasper; Hellmann, Ines et al.
    In: Nature, Vol. 486, No. 7404, 2012, p. 527-31.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  96. 2011
  97. Published
    Genomic determinants of protein evolution and polymorphism in Arabidopsis. / Slotte, Tanja; Bataillon, Thomas; Hansen, Troels T et al.
    In: Genome Biology and Evolution, Vol. 3, 16.09.2011, p. 1210-1219.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  98. Published
    Depletion of the RNA exosome triggers hypermethylation of human promoters. / Mapendano, Christophe Kamungu; Preker, Pascal; Villesen, P et al.
    2011. Abstract from Third EMBO meeting on 'Chromatin and Epigenetics, Heidelberg, Germany.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  99. Published
    Comparative and demographic analysis of orang-utan genomes. / Locke, Devin P.; Hillier, LaDeana W.; Warren, Wesley C. et al.
    In: Nature, Vol. 469, 2011, p. 529-533.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  100. Published
    Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model. / Mailund, Thomas; Dutheil, Julien; Hobolth, Asger et al.
    In: P L o S Genetics, Vol. 7, No. 3, 2011.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  101. Published
    Incomplete lineage sorting patterns among human, chimpanzee and orangutan suggest recent orangutan speciation and widespread selection. / Hobolth, Asger; Dutheil, Julien; Hawks, John et al.
    In: Genome Research, Vol. 21, No. 3, 2011, p. 349-356.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  102. Published
    Symposium on Biodiversity in the Silicon Age - Abstracts. / Balslev, Henrik (Editor); Arge, Lars Allan (Editor); Svenning, J.-C. (Editor) et al.
    The Royal Danish Academy of Sciences and Letters, 2011. 32 p.

    Research output: Book/anthology/dissertation/reportAnthologyResearch

  103. Published
    The making of a new pathogen: Insights from comparative population genomics of the domesticated wheat pathogen Mycosphaerella graminicola and its wild sister species. / Stukenbrock, Eva H; Bataillon, Thomas; Dutheil, Julien Y et al.
    In: Genome Research, Vol. 21, 2011, p. 2157-2166.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  104. 2010
  105. Published
    Whole-genome and chromosome evolution associated with host adaptation and speciation of the wheat pathogen Mycosphaerella graminicola. / Stukenbrock, Eva; Jørgensen, Frank; Zala, Marcello et al.
    In: P L o S Genetics, Vol. 23, No. 6, 23.12.2010.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  106. Published
    Insertion and deletion processes in recent human history. / Sjödin, Per; Bataillon, Thomas; Schierup, Mikkel H.
    In: P L o S One, Vol. 5, No. 1, 2010, p. e8650.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  107. Published
    Molecular evolution within and between self-incompatibility specificities. / Castric, V; Bechsgaard, J S; Grenier, S et al.
    In: Molecular Biology and Evolution, Vol. 27, No. 1, 2010, p. 11-20.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  108. Published
    The coalescent in bacterial populations. / Schierup, Mikkel Heide; Wiuf, Carsten Henrik.
    Bacterial population genetics in infectious disease. ed. / D. Ashley Robinson; Daniel Falush; Edward J. Feil. United States: Wiley-Blackwell, 2010. p. 3-19.

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearchpeer-review

  109. 2009
  110. Published
    Ancestral population genomics: the coalescent hidden Markov model approach. / Dutheil, Julien; Ganapathy, Ganesh; Hobolth, Asger et al.
    In: Genetics, Vol. 183, No. 1, 2009, p. 259–274.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  111. Published
    Expression of distinct self-incompatibility specificities in Arabidopsis thaliana. / Boggs, Nathan A; Dwyer, Kathleen G; Shah, Paurush et al.
    In: Genetics, Vol. 182, No. 4, 2009, p. 1313-21.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  112. Published
    Haplotype frequencies in a sub-region of chromosome 19q13.3, related to risk and prognosis of cancer, differ dramatically between ethnic groups. / Schierup, Mikkel H; Mailund, Thomas; Li, Heng et al.
    In: B M C Medical Genetics, Vol. 10, 2009, p. 20.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  113. Published
    Increased rate of human mutations where DNA and RNA polymerases collide. / Jørgensen, Frank Grønlund; Schierup, Mikkel H.
    In: Trends in Genetics, Vol. 25, No. 12, 2009, p. 523-527.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  114. Published
    Local phylogeny mapping of quantitative traits: Higher accuracy and better ranking than single marker association in genomewide scans. / Besenbacher, Søren; Mailund, Thomas; Schierup, Mikkel Heide.
    In: Genetics, Vol. 181, 2009, p. 747-753.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  115. Published
    Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck. / Guo, Ya-Long; Bechsgaard, Jesper S; Slotte, Tanja et al.
    In: Proceedings of the National Academy of Sciences, Vol. 106, No. 13, 2009, p. 5246-51.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

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