Qiaomei Fu, Key Laboratory of Vertebrate Evolution and Human Origins of Chinese Academy of Sciences, IVPP, CAS, Beijing 100044, China
,
Cosimo Posth, Institute for Archaeological Sciences, Archaeo and Palaeogenetics, University of Tübingen, 72070 Tübingen, Germany
,
Mateja Hajdinjak, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
,
Martin Petr, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
,
Swapan Mallick, Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
,
Daniel Fernandes, School of Archaeology and Earth Institute, University College Dublin, Belfield, Dublin 4, Ireland
,
Anja Furtwängler, Institute for Archaeological Sciences, Archaeo and Palaeogenetics, University of Tübingen, 72070 Tübingen, Germany
,
Wolfgang Haak, Department of Archaeogenetics, Max Planck Institute for the Science of Human History, 07745 Jena, Germany
,
Matthias Meyer, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
,
Alissa Mittnik, Institute for Archaeological Sciences, Archaeo and Palaeogenetics, University of Tübingen, 72070 Tübingen, Germany
,
Birgit Nickel, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
,
Alexander Peltzer, Institute for Archaeological Sciences, Archaeo and Palaeogenetics, University of Tübingen, 72070 Tübingen, Germany
,
Nadin Rohland, Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
,
Vivian Slon, Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
,
Sahra Talamo, Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
,
Iosif Lazaridis, Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
,
Mark Lipson, Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
,
Iain Mathieson, Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
,
Stephan Schiffels, Department of Archaeogenetics, Max Planck Institute for the Science of Human History, 07745 Jena, Germany
,
Pontus Skoglund, Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA
,
Anatoly P. Derevianko, Institute of Archaeology and Ethnography, Russian Academy of Sciences, Siberian Branch, 17 Novosibirsk, RU-630090, Russia
,
Nikolai Drozdov, Institute of Archaeology and Ethnography, Russian Academy of Sciences, Siberian Branch, 17 Novosibirsk, RU-630090, Russia
,
Vyacheslav Slavinsky, Institute of Archaeology and Ethnography, Russian Academy of Sciences, Siberian Branch, 17 Novosibirsk, RU-630090, Russia
,
Alexander Tsybankov, Institute of Archaeology and Ethnography, Russian Academy of Sciences, Siberian Branch, 17 Novosibirsk, RU-630090, Russia
,
Renata Grifoni Cremonesi, University of Pisa
,
Francesco Mallegni, University of Pisa
,
Bernard Gély, Direction régionale des affaires culturelles Rhône-Alpes, 69283 Lyon, Cedex 01, France
,
Eligio Vacca, Dipartimento di Biologia, Università degli Studi di Bari ‘Aldo Moro’, 70125 Bari, Italy
,
Manuel R. González Morales, Instituto Internacional de Investigaciones Prehistóricas, Universidad de Cantabria, 39005 Santander, Spain
,
Lawrence G. Straus, Instituto Internacional de Investigaciones Prehistóricas, Universidad de Cantabria, 39005 Santander, Spain
,
Christine Neugebauer-Maresch, Quaternary Archaeology, Institute for Oriental and European Archaeology, Austrian Academy of Sciences, 1010 Vienna, Austria
,
Maria Teschler-Nicola, Department of Anthropology, Natural History Museum Vienna, 1010 Vienna, Austria
,
Silviu Constantin, “Emil Racoviţă” Institute of Speleology, 010986 Bucharest 12, Romania
,
Oana Teodora Moldovan, “Emil Racoviţă” Institute of Speleology, Cluj Branch, 400006 Cluj, Romania
,
Stefano Benazzi, Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
,
Marco Peresani, Sezione di Scienze Preistoriche e Antropologiche, Dipartimento di Studi Umanistici, Università di Ferrara, 44100 Ferrara, Italy
,
Donato Coppola, Università degli Studi di Bari ‘Aldo Moro’, 70125 Bari, Italy
,
Martina Lari, Dipartimento di Biologia, Università di Firenze, 50122 Florence, Italy
,
Stefano Ricci, Dipartimento di Scienze Fisiche, della Terra e dell’Ambiente, U.R. Preistoria e Antropologia, Università degli Studi di Siena, 53100 Siena, Italy
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Annamaria Ronchitelli, Dipartimento di Scienze Fisiche, della Terra e dell’Ambiente, U.R. Preistoria e Antropologia, Università degli Studi di Siena, 53100 Siena, Italy
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Frédérique Valentin, CNRS/UMR 7041 ArScAn MAE, 92023 Nanterre, France
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Corinne Thevenet, INRAP/UMR 8215 Trajectoires 21, 92023 Nanterre, France
,
Kurt Wehrberger, Ulmer Museum, 89073 Ulm, Germany
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Dan Grigorescu, University of Bucharest, Faculty of Geology and Geophysics, Department of Geology, 01041 Bucharest, Romania
,
Hélène Rougier, Department of Anthropology, California State University Northridge, Northridge, California 91330-8244, USA
,
Isabelle Crevecoeur, Université de Bordeaux, CNRS, UMR 5199-PACEA, 33615 Pessac Cedex, France
,
Damien Flas, TRACES – UMR 5608, Université Toulouse Jean Jaurès, Maison de la Recherche, 31058 Toulouse Cedex 9, France
,
Patrick Semal, Royal Belgian Institute of Natural Sciences, 1000 Brussels, Belgium
Modern humans arrived in Europe ~45,000 years ago, but little is known about their genetic composition before the start of farming ~8,500 years ago. Here we analyse genome-wide data from 51 Eurasians from ~45,000–7,000 years ago. Over this time, the proportion of Neanderthal DNA decreased from 3–6% to around 2%, consistent with natural selection against Neanderthal variants in modern humans. Whereas there is no evidence of the earliest modern humans in Europe contributing to the genetic composition of present-day Europeans, all individuals between ~37,000 and ~14,000 years ago descended from a single founder population which forms part of the ancestry of present-day Europeans. An ~35,000-year-old individual from northwest Europe represents an early branch of this founder population which was then displaced across a broad region, before reappearing in southwest Europe at the height of the last Ice Age ~19,000 years ago. During the major warming period after ~14,000 years ago, a genetic component related to present-day Near Easterners became widespread in Europe. These results document how population turnover and migration have been recurring themes of European prehistory.