Research output per year
Research output per year
Personal profile
Research
Prof. Jakob Skou Pedersen’s group focuses on cancer evolution and gene regulation. Research projects include statistical method development and Big Data analysis with basic science and clinical application aims.
The group uses generative AI and Bayesian approaches to model extensive multi-omics data sets in basic science and clinical translational settings. We are especially interested in its application to circulating tumor DNA.
Areas of expertise
- Bioinformatics
- Statistical modelling
- Circulating tumor DNA (ctDNA)
- Single cell analysis
Fingerprint
Dive into the research topics where Jakob Skou Pedersen is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
- 1 Similar Profiles
Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
Research output
-
Comprehensive genomic characterization of early-stage bladder cancer
Prip, F., Lamy, P., Lindskrog, S. V., Strandgaard, T., Nordentoft, I., Birkenkamp-Demtröder, K., Birkbak, N. J., Kristjánsdóttir, N., Kjær, A., Andreasen, T. G., Ahrenfeldt, J., Pedersen, J. S., Rasmussen, A. M., Hermann, G. G., Mogensen, K., Petersen, A. C., Hartmann, A., Grimm, M. O., Horstmann, M. & Nawroth, R. & 12 others, , Jan 2025, In: Nature Genetics. 57, 1, p. 115-125 11 p., 2301.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access1 Citation (Scopus) -
circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA
Okholm, T. L. H., Kamstrup, A. B., Nielsen, M. M., Hollensen, A. K., Graversgaard, M. L., Sørensen, M. H., Kristensen, L. S., Vang, S., Park, S. S., Yeo, E., Dyrskjøt, L., Kjems, J., Pedersen, J. S. & Damgaard, C. K., 2024, In: eLife. 13, RP91783.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access1 Citation (Scopus) -
Error-Corrected Deep Targeted Sequencing of Circulating Cell-Free DNA from Colorectal Cancer Patients for Sensitive Detection of Circulating Tumor DNA
Frydendahl, A., Rasmussen, M. H., Jensen, S. Ø., Henriksen, T. V., Demuth, C., Diekema, M., Ditzel, H. J., Wen, S. W. C., Pedersen, J. S., Dyrskjøt, L. & Andersen, C. L., Apr 2024, In: International Journal of Molecular Sciences . 25, 8, 4252.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access4 Citations (Scopus) -
Exploring the tumor genomic landscape of aggressive prostate cancer by whole-genome sequencing of tissue or liquid biopsies
Weiss, S., Lamy, P., Rusan, M., Nørgaard, M., Ulhøi, B. P., Knudsen, M., Kassentoft, C. G., Farajzadeh, L., Jensen, J. B., Pedersen, J. S., Borre, M. & Sørensen, K. D., Jul 2024, In: International Journal of Cancer. 155, 2, p. 298-313 16 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access1 Citation (Scopus) -
circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA
Okholm, T. L. H., Kamstrup, A. B., Nielsen, M. M., Hollensen, A. K., Graversgaard, M. L., Kristensen, L. S., Vang, S., Park, S. S., Yeo, G. W., Dyrskjøt, L., Kjems, J., Pedersen, J. S. & Damgaard, C. K., 14 Sept 2023.Research output: Working paper/Preprint › Preprint
Activities
-
Member of the AIRC Southern Italy Scholar Evaluation Committee
Pedersen, J. S. (Presenter)
1 Jan 2023 → 31 Dec 2025Activity: Evaluation, external lectures and examination › Member of evaluation panel
-
The Italian Foundation for Cancer Research (AIRC)
Pedersen, J. S. (Member)
1 Jan 2023 → 31 Dec 2024Activity: Presentations, memberships, employment, ownership and other activities › Member of evaluation panel
-
DDSA fellowship evaluation committee member
Pedersen, J. S. (Presenter)
1 Jan 2022 → 31 Dec 2024Activity: Evaluation, external lectures and examination › Member of evaluation panel
-
Structure, conservation, and expression of human non-coding RNAs
Pedersen, J. S. (Speaker)
15 May 2013Activity: Participating in or organising an event types › Participation in or organisation of workshop, seminar or course
-
Structure, conservation, and expression of human non-coding RNAs
Pedersen, J. S. (Speaker)
13 May 2013Activity: Participating in or organising an event types › Participation in or organisation of workshop, seminar or course