Aarhus University Seal / Aarhus Universitets segl

Frans A.A. Mulder

  1. 2020
  2. Published

    ODiNPred : comprehensive prediction of protein order and disorder. / Dass, Rupashree; Mulder, Frans A.A.; Nielsen, Jakob Toudahl.

    In: Scientific Reports, Vol. 10, No. 1, 14780, 12.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  3. Published

    Predicting NMR relaxation of proteins from molecular dynamics simulations with accurate methyl rotation barriers. / Hoffmann, Falk; Mulder, Frans A.A.; Schäfer, Lars V.

    In: Journal of Chemical Physics, Vol. 152, No. 8, 084102, 28.02.2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. Published

    Genetic Variance of Metabolomic Features and Their Relationship With Malting Quality Traits in Spring Barley. / Guo, Xiangyu; Sarup, Pernille Merete; Jensen, Jens Due; Jihad, Orabi; Kristensen, Nanna Hellum; Mulder, Frans A.A.; Jahoor, Ahmed; Jensen, Just.

    In: Frontiers in Plant Science, Vol. 11, 575467, 2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  5. Published

    Paris-DÉCOR : A Protocol for the Determination of Fast Protein Backbone Amide Hydrogen Exchange Rates. / Dass, Rupashree; Mulder, Frans A.A.

    Intrinsically Disordered Proteins. ed. / Birthe B. Kragelund; Karen Skriver. New York : Humana Press, 2020. p. 337-344 (Methods in Molecular Biology, Vol. 2141).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearchpeer-review

  6. Published

    Quantitative Protein Disorder Assessment Using NMR Chemical Shifts. / Nielsen, Jakob T.; Mulder, Frans A.A.

    Intrinsically Disordered Proteins. ed. / Birthe B. Kragelund; Karen Skriver. New York : Humana Press, 2020. p. 303-317 (Methods in Molecular Biology, Vol. 2141).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearchpeer-review

  7. E-pub ahead of print

    Sensitive and simplified : a combinatorial acquisition of five distinct 2D constant-time(13)C-H-1 NMR protein correlation spectra. / Yoshimura, Yuichi; Mulder, Frans A. A.

    In: Journal of Biomolecular NMR, 2020.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  8. Published

    Structure and Function of the Bacterial Protein Toxin Phenomycin. / Hansen, Bente Kring; Larsen, Camilla K; Nielsen, Jakob T; Svenningsen, Esben B; Van, Lan B; Jacobsen, Kristian M; Bjerring, Morten; Flygaard, Rasmus K; Jenner, Lasse B; Nejsum, Lene N; Brodersen, Ditlev E; Mulder, Frans A A; Tørring, Thomas; Poulsen, Thomas B.

    In: Structure, Vol. 28, No. 5, 2020, p. 528-539.e9.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  9. 2019
  10. Published

    Quality and bias of protein disorder predictors. / Nielsen, Jakob T.; Mulder, Frans A.A.

    In: Scientific Reports, Vol. 9, 5137, 26.03.2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  11. Published

    Measurement of Very Fast Exchange Rates of Individual Amide Protons in Proteins by NMR Spectroscopy. / Dass, Rupashree; Corlianò, Enrico; Mulder, Frans A.A.

    In: ChemPhysChem, Vol. 20, No. 2, 21.01.2019, p. 231-235.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  12. Published

    Fast and Quantitative NMR Metabolite Analysis Afforded by a Paramagnetic Co-Solute. / Mulder, Frans A.A.; Tenori, Leonardo; Luchinat, Claudio.

    In: Angewandte Chemie - International Edition, Vol. 58, No. 43, 2019, p. 15283-15286.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  13. Published

    How internal cavities destabilize a protein. / Xue, Mengjun; Wakamoto, Takuro; Kejlberg, Camilla; Yoshimura, Yuichi; Nielsen, Tania Aaquist; Risør, Michael Wulff; Sanggaard, Kristian Wejse; Kitahara, Ryo; Mulder, Frans A.A.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 116, No. 42, 2019, p. 21031-21036.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  14. 2018
  15. Published

    Potent α-Synuclein Aggregation Inhibitors, Identified by High-Throughput Screening, Mainly Target the Monomeric State. / Kurnik, Martin; Sahin, Cagla; Andersen, Camilla Bertel; Lorenzen, Nikolai; Giehm, Lise; Mohammad-Beigi, Hossein; Jessen, Christian Moestrup; Pedersen, Jan Skov; Christiansen, Gunna; Petersen, Steen Vang; Staal, Roland; Krishnamurthy, Girija; Pitts, Keith; Reinhart, Peter H; Mulder, Frans A A; Mente, Scot; Hirst, Warren D; Otzen, Daniel E.

    In: Cell Chemical Biology, Vol. 25, No. 11, 15.11.2018, p. 1389-1402.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  16. Published

    PepKalc : Scalable and comprehensive calculation of electrostatic interactions in random coil polypeptides. / Tamiola, Kamil; Scheek, Ruud M.; Van Der Meulen, Pieter; Mulder, Frans A.A.

    In: Bioinformatics, Vol. 34, No. 12, 15.06.2018, p. 2053-2060.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  17. Published

    Accurate Methyl Group Dynamics in Protein Simulations with AMBER Force Fields. / Hoffmann, Falk; Mulder, Frans A. A.; Schaefer, Lars V.

    In: Journal of Physical Chemistry B, Vol. 122, No. 19, 17.05.2018, p. 5038-5048.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  18. Published

    POTENCI : prediction of temperature, neighbor and pH-corrected chemical shifts for intrinsically disordered proteins. / Nielsen, Jakob Toudahl; Mulder, Frans A.A.

    In: Journal of Biomolecular NMR, Vol. 70, No. 3, 20.03.2018, p. 141-165.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  19. Published

    Nuclear magnetic resonance-based determination of dioxygen binding sites in protein cavities. / Kitahara, Ryo; Sakuraba, Shun; Kameda, Tomoshi; Okuda, Sanshiro; Xue, Mengjun; Mulder, Frans A A.

    In: Protein Science, Vol. 27, No. 3, 01.03.2018, p. 769-779.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. Published

    Fuzzy and fast nuclear transport. / Mulder, Frans A.A.

    In: Journal of Biological Chemistry, Vol. 293, No. 12, 01.01.2018, p. 4564-4565.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  21. Published

    Narrowing the gap between experimental and computational determination of methyl group dynamics in proteins. / Hoffmann, Falk; Xue, Mengjun; Schäfer, Lars V.; Mulder, Frans A.A.

    In: Physical Chemistry Chemical Physics, Vol. 20, No. 38, 01.01.2018, p. 24577-24590.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  22. Published

    Small Paramagnetic Co-solute Molecules. / Madl, Tobias; Mulder, Frans A.A.

    Paramagnetism in Experimental Biomolecular NMR . ed. / Claudio Luchinat; Giacomo Parigi; Enrico Ravera. Vol. 2018/16 Royal Society of Chemistry, 2018. p. 283-309 (New Developments in NMR).

    Research output: Contribution to book/anthology/report/proceedingBook chapterResearchpeer-review

  23. 2017
  24. Published

    Unambiguous Determination of Protein Arginine Ionization States in Solution by NMR Spectroscopy. / Yoshimura, Yuichi; Oktaviani, Nur Alia; Yonezawa, Kento; Kamikubo, Hironari; Mulder, Frans A A.

    In: Angewandte Chemie International Edition, Vol. 56, No. 1, 02.01.2017, p. 239–242.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  25. Published

    Active-Site pKa Determination for Photoactive Yellow Protein Rationalizes Slow Ground-State Recovery. / Oktaviani, Nur Alia; Pool, Trijntje J; Yoshimura, Yuichi; Kamikubo, Hironari; Scheek, Ruud M; Kataoka, Mikio; Mulder, Frans A.A.

    In: Biophysical Journal, Vol. 112, No. 10, 2017, p. 2109-2116.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  26. Published

    MOAG-4 promotes the aggregation of α-synuclein by competing with self-protective electrostatic interactions. / Yoshimura, Yuichi; Holmberg, Mats; Kukic, Predrag; Andersen, Camilla Bertel; Mata-Cabana, Alejandro; Falsone, S. Fabio; Vendruscolo, Michele; Nollen, Ellen A.A.; Mulder, Frans.

    In: Journal of Biological Chemistry, Vol. 292, No. 20, 2017, p. 8269-8278.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  27. 2016
  28. Published

    Aberrant increase of NMR signal in hydrogen exchange experiments. Observation and explanation. / Xue, Mengjun; Kitahara, Ryo; Yoshimura, Yuichi; Mulder, Frans A A.

    In: Biochemical and Biophysical Research Communications, Vol. 478, No. 3, 2016, p. 1185-1188.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  29. Published

    Detecting O2 binding sites in protein cavities. / Kitahara, Ryo; Yoshimura, Yuichi; Xue, Mengjun; Kameda, Tomoshi; Mulder, Frans A A.

    In: Scientific Reports, Vol. 6, 20534, 2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  30. Published

    Near-complete 1H, 13C, 15N resonance assignments of dimethylsulfoxide-denatured TGFBIp FAS1-4 A546T. / Kulminskaya, Natalia V; Yoshimura, Yuichi; Runager, Kasper; Sørensen, Charlotte S; Bjerring, Morten; Andreasen, Maria; Otzen, Daniel E; Enghild, Jan J; Nielsen, Niels Christian; Mulder, Frans A A.

    In: Biomolecular N M R Assignments, Vol. 10, No. 1, 2016, p. 25-29.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  31. Published

    There is Diversity in Disorder-"In all Chaos there is a Cosmos, in all Disorder a Secret Order". / Nielsen, Jakob T; Mulder, Frans A A.

    In: Frontiers in Molecular Biosciences, Vol. 3, 4, 2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  32. 2015
  33. Published

    Contemporary NMR Studies of Protein Electrostatics. / Hass, Mathias A S; Mulder, Frans A A.

    In: Annual Review of Biophysics, Vol. 44, 22.06.2015, p. 53-75.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  34. Published

    Optimized co-solute paramagnetic relaxation enhancement for the rapid NMR analysis of a highly fibrillogenic peptide. / Oktaviani, Nur Alia; Risør, Michael W; Lee, Young-Ho; Megens, Rik P; de Jong, Djurre H; Otten, Renee; Scheek, Ruud M; Enghild, Jan J; Nielsen, Niels Christian; Ikegami, Takahisa; Mulder, Frans A A.

    In: Journal of Biomolecular N M R, Vol. 62, No. 2, 06.2015, p. 129-142.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  35. Published

    The solution structure of the MANEC-type domain from Hepatocyte Growth Factor Activator Inhibitor 1 reveals an unexpected PAN/apple domain-type fold. / Hong, Zebin; Nowakowski, Michal; Spronk, Chris; Petersen, Steen Vang; Andreasen, Peter; Koźmiński, Wiktor ; Mulder, Frans; Jensen, Jan Kristian.

    In: Biochemical Journal, Vol. 466, No. 2, 01.03.2015, p. 299-309.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  36. Published

    Easy and unambiguous sequential assignments of intrinsically disordered proteins by correlating the backbone (15)N or (13)C' chemical shifts of multiple contiguous residues in highly resolved 3D spectra. / Yoshimura, Yuichi; Kulminskaya, Natalia V; Mulder, Frans A A.

    In: Journal of Biomolecular N M R, Vol. 61, No. 2, 11.01.2015, p. 109-121.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  37. Published

    Cavity as a Source of Conformational Fluctuation and High-Energy State : High-Pressure NMR Study of a Cavity-Enlarged Mutant of T4Lysozyme. / Maeno, Akihiro; Sindhikara, Daniel; Hirata, Fumio; Otten, Renee; Dahlquist, Frederick W; Yokoyama, Shigeyuki; Akasaka, Kazuyuki; Mulder, Frans A.A.; Kitahara, Ryo.

    In: Biophysical Journal, Vol. 108, No. 1, 06.01.2015, p. 133-45.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  38. Published

    Is pressure-induced signal loss in NMR spectra for the Leu99Ala cavity mutant of T4 lysozyme due to unfolding? / Kitahara, Ryo; Mulder, Frans A.A.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 112, No. 9, E923, 2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperLetterResearchpeer-review

  39. Published

    Structural basis for RNA-genome recognition during bacteriophage Qβ replication. / Olesen, Heidi Gytz; Mohr, Durita; Seweryn, Paulina; Yoshimura, Yuichi; Kutlubaeva, Zarina; Dolman, Fleur; Chelchessa, Bosene; Chetverin, Alexander B; Mulder, Frans A A; Brodersen, Ditlev E; Knudsen, Charlotte R.

    In: Nucleic Acids Research, Vol. 43, No. 22, 2015, p. 10893-10906.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  40. 2014
  41. Published

    How epigallocatechin gallate can inhibit α-synuclein oligomer toxicity in vitro. / Lorenzen, Nikolai; Nielsen, Søren B.; Yoshimura, Yuichi; Vad, Brian S.; Andersen, Camilla Bertel; Betzer, Cristine; Kaspersen, Jørn D.; Christiansen, Gunna; Pedersen, Jan Skov; Jensen, Poul Henning; Mulder, Frans A A; Otzen, Daniel E.

    In: Journal of Biological Chemistry, Vol. 289, No. 31, 01.08.2014, p. 21299-21310.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  42. Published

    Aβ dimers differ from monomers in structural propensity, aggregation paths and population of synaptotoxic assemblies. / O'Malley, Tiernan T; Oktaviani, Nur Alia; Zhang, Dainan; Lomakin, Aleksey; O'Nuallain, Brian; Linse, Sara; Benedek, George B.; Rowan, Michael J.; Mulder, Frans A.A.; Walsh, Dominic M.

    In: Biochemical Journal, Vol. 461, No. 3, 2014, p. 413-426.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  43. Published

    The Solution Structure, Binding Properties, and Dynamics of the Bacterial Siderophore-binding Protein FepB. / Chu, Byron C H; Otten, Renee; Krewulak, Karla D; Mulder, Frans A.A.; Vogel, Hans J.

    In: Journal of Biological Chemistry, Vol. 289, No. 42, 2014, p. 29219-29234.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  44. 2013
  45. Published

    Bicyclic Peptide Inhibitor of Urokinase-Type Plasminogen Activator : Mode of Action. / Roodbeen, Renée; Paaske, Berit; Jiang, Longguang; Jensen, Jan Kristian; Christensen, Anni; Nielsen, Jakob T; Huang, Mingdong; Mulder, Frans A.A.; Nielsen, Niels Christian; Andreasen, Peter; Jensen, Knud Jørgen.

    In: ChemBioChem, Vol. 14, No. 16, 02.10.2013, p. 2179–2188.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  46. Published

    1H, 13C, and 15N resonance assignment of photoactive yellow protein. / Pool, Trintje J.; Oktaviani, Nur Alia; Kamikubo, Hironari; Kataoka, Mikio; Mulder, Frans A.A.

    In: Biomolecular N M R Assignments, Vol. 7, No. 1, 2013, p. 97-100.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  47. Published

    Aspartate buffer and divalent metal ions affect oxytocin in aqueous solution and protect it from degradation. / Avanti, Christina; Oktaviani, Nur Alia; Hinrichs, Wouther L.J.; Frijlink, Henderik W.; Mulder, Frans A.A.

    In: International Journal of Pharmaceutics, Vol. 444, No. 1-2, 2013, p. 139-145.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  48. Published

    Protein Surface and Core Dynamics Show Concerted Hydration-Dependent Activation. / Wood, Kathleen; Gallat, François-Xavier; Otten, Renee; van Heel, Auke J; Lethier, Mathilde; van Eijck, Lambert; Moulin, Martine; Haertlein, Michael; Weik, Martin; Mulder, Frans A.A.

    In: Angewandte Chemie International Edition, Vol. 52, No. 2, 2013, p. 665-668.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  49. 2012
  50. Published

    Backbone and side chain NMR assignments for the intrinsically disordered cytoplasmic domain of human neuroligin-3. / Wood, Kathleen; Paz, Aviv; Dijkstra, Klaas; Scheek, Ruud M; Otten, Renee; Silman, Israel; Sussman, Joel L; Mulder, Frans A.A.

    In: Biomolecular N M R Assignments, Vol. 6, No. 1, 2012, p. 15-8.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  51. Published

    Comprehensive determination of protein tyrosine pKa values for photoactive yellow protein using indirect 13C NMR spectroscopy. / Oktaviani, Nur Alia; Pool, Trijntje J; Kamikubo, Hironari; Slager, Jelle; Scheek, Ruud M; Kataoka, Mikio; Mulder, Frans A.A.

    In: Biophysical Journal, Vol. 102, No. 3, 2012, p. 579-86.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  52. Published

    H-1, C-13, and N-15 resonance assignment of photoactive yellow protein. / Pool, T.J.; Oktaviani, N. A.; Kamikubo, H.; Kataoka, M.; Mulder, Frans A.A.

    In: Biomolecular N M R Assignments, Vol. 7, 2012, p. 97-100.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  53. Published

    Multidimensional NMR spectroscopy. / Mulder, Frans A.A.; Scheek, Ruud M.

    Encyclopedia of Biophysics. ed. / Gordon C K Roberts. Springer, 2012.

    Research output: Contribution to book/anthology/report/proceedingEncyclopedia entryResearchpeer-review

  54. Published

    Using NMR chemical shifts to calculate the propensity for structural order and disorder in proteins. / Tamiola, Kamil; Mulder, Frans A.A.

    In: Biochemical Society. Transactions, Vol. 40, No. 5, 2012, p. 1014-20.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  55. 2011
  56. Published

    100% complete assignment of non-labile (1)H, (13)C, and (15)N signals for calcium-loaded Calbindin D(9k) P43G. / Oktaviani, Nur Alia; Otten, Renee; Dijkstra, Klaas; Scheek, Ruud M; Thulin, Eva; Akke, Mikael; Mulder, Frans A A.

    In: Biomolecular N M R Assignments, Vol. 5, No. 1, 04.2011, p. 79-84.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  57. Published

    A tribute to Lewis E Kay on his 50th birthday. / Gardner, K.H.; Mittermaier, A.; Mulder, Frans A.A.

    In: Journal of Biomolecular N M R, Vol. 51, No. 1-2, 2011, p. 51: pp 3-4.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearch

  58. Published

    Cystathionine β-synthase (CBS) domains 1 and 2 fulfill different roles in ionic strength sensing of the ATP-binding cassette (ABC) transporter OpuA. / Karasawa, Akira; Erkens, Guus B; Berntsson, Ronnie P-A; Otten, Renee; Schuurman-Wolters, Gea K; Mulder, Frans A.A.; Poolman, Bert.

    In: Journal of Biological Chemistry, Vol. 286, No. 43, 2011, p. 37280-91.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  59. Published

    Long unfolded linkers facilitate membrane protein import through the nuclear pore complex. / Meinema, Anne C; Laba, Justyna K; Hapsari, Rizqiya A; Otten, Renee; Mulder, Frans A.A.; Kralt, Annemarie; van den Bogaart, Geert; Lusk, C Patrick; Poolman, Bert; Veenhoff, Liesbeth M.

    In: Science, Vol. 333, No. 6038, 2011, p. 90-3.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  60. Published

    Origin and removal of mixed-phase artifacts in gradient sensitivity enhanced heteronuclear single quantum correlation spectra. / Mulder, Frans A.A.; Otten, Renee; Scheek, Ruud M.

    In: Journal of Biomolecular N M R, Vol. 51, No. 1-2, 2011, p. 199-207.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  61. Published

    ncIDP-assign : a SPARKY extension for the effective NMR assignment of intrinsically disordered proteins. / Tamiola, Kamil; Mulder, Frans A.A.

    In: Bioinformatics (Online), Vol. 27, No. 7, 2011, p. 1039-40.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  62. 2010
  63. Published

    Probing microsecond time scale dynamics in proteins by methyl 1H Carr-Purcell-Meiboom-Gill relaxation dispersion NMR measurements. Application to activation of the signaling protein NtrCr. / Otten, Renee; Villali, Janice; Kern, Dorothee; Mulder, Frans A A.

    In: Journal of the American Chemical Society, Vol. 132, No. 47, 01.12.2010, p. 17004-17014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  64. Published

    PKa values for the unfolded state under native conditions explain the pH-dependent stability of PGB1. / Lindman, Stina; Bauer, Mikael C.; Lund, Mikael; Diehl, Carl; Mulder, Frans A A; Akke, Mikael; Linse, Sara.

    In: Biophysical Journal, Vol. 99, No. 10, 17.11.2010, p. 3365-3373.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  65. Published

    The low-temperature inflection observed in neutron scattering measurements of proteins is due to methyl rotation : Direct evidence using isotope labeling and molecular dynamics simulations. / Wood, Kathleen; Tobias, Douglas J.; Kessler, Brigitte; Gabel, Frank; Oesterhelt, Dieter; Mulder, Frans A A; Zaccai, Giuseppe; Weik, Martin.

    In: Journal of the American Chemical Society, Vol. 132, No. 14, 14.04.2010, p. 4990-4991.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  66. Published

    Comprehensive and cost-effective NMR spectroscopy of methyl groups in large proteins. / Otten, Renee; Chu, Byron; Krewulak, Karla D.; Vogel, Hans J.; Mulder, F. A A.

    In: Journal of the American Chemical Society, Vol. 132, No. 9, 10.03.2010, p. 2952-2960.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  67. Published

    NMR chemical shift data and ab initio shielding calculations : Emerging tools for protein structure determination. / Mulder, F. A A; Filatov, Michael.

    In: Chemical Society Reviews, Vol. 39, No. 2, 08.02.2010, p. 578-590.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  68. Published

    Determination of Leu side-chain conformations in excited protein states by NMR relaxation dispersion. / Hansen, D Flemming; Neudecker, Philipp; Vallurupalli, Pramodh; Mulder, Frans A A; Kay, Lewis E.

    In: Journal of the American Chemical Society, Vol. 132, No. 1, 13.01.2010, p. 42-43.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  69. Published

    Sequence-specific random coil chemical shifts of intrinsically disordered proteins. / Tamiola, Kamil; Acar, Burçin; Mulder, Frans A.A.

    In: Journal of the American Chemical Society, Vol. 132, No. 51, 2010, p. 18000-3.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  70. 2009
  71. Published

    Comprehensive determination of 3JHNHα for unfolded proteins using 13C′-resolved spin-echo difference spectroscopy. / Otten, Renee; Wood, Kathleen; Mulder, Frans A A.

    In: Journal of Biomolecular N M R, Vol. 45, No. 4, 01.12.2009, p. 343-349.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  72. 2008
  73. Published

    Multiple-timescale dynamics of side-chain carboxyl and carbonyl groups in proteins by 13C nuclear spin relaxation. / Paquin, Raphaël; Ferrage, Fabien; Mulder, Frans A A; Akke, Mikael; Bodenhausen, Geoffrey.

    In: Journal of the American Chemical Society, Vol. 130, No. 47, 26.11.2008, p. 15805-15807.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  74. Published

    Biophysical characterization of the unstructured cytoplasmic domain of the human neuronal adhesion protein neuroligin 3. / Paz, Aviv; Zeev-Ben-Mordehai, Tzviya; Lundqvist, Martin; Sherman, Eilon; Mylonas, Efstratios; Weiner, K. Lev; Haran, Gilad; Svergun, Dmitri I.; Mulder, F. A A; Sussman, Joel L.; Silman, Israel.

    In: Biophysical Journal, Vol. 95, No. 4, 15.08.2008, p. 1928-1944.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  75. 2007
  76. Published

    Residue-specific pKa determination of lysine and arginine side chains by indirect 15N and 13C NMR spectroscopy : Application to apo calmodulin. / André, Ingemar; Linse, Sara; Mulder, Frans A A.

    In: Journal of the American Chemical Society, Vol. 129, No. 51, 26.12.2007, p. 15805-15813.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  77. Published

    The Ribosomal Stalk Binds to Translation Factors IF2, EF-Tu, EF-G and RF3 via a Conserved Region of the L12 C-terminal Domain. / Helgstrand, Magnus; Mandava, Chandra S.; Mulder, F. A A; Liljas, Anders; Sanyal, Suparna; Akke, Mikael.

    In: Journal of Molecular Biology, Vol. 365, No. 2, 12.01.2007, p. 468-479.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  78. Published

    pKa Values for Side-Chain Carboxyl Groups of a PGB1 Variant Explain Salt and pH-Dependent Stability. / Lindman, Stina; Linse, Sara; Mulder, Frans A A; André, Ingemar.

    In: Biophysical Journal, Vol. 92, No. 1, 01.01.2007, p. 257-266.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  79. 2006
  80. Published

    Electrostatic contributions to residue-specific protonation equilibria and proton binding capacitance for a small protein. / Lindman, Stina; Linse, Sara; Mulder, Frans A A; André, Ingemar.

    In: Biochemistry, Vol. 45, No. 47, 28.11.2006, p. 13993-14002.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  81. Published

    Functional dynamics of human FKBP12 revealed by methyl 13C rotating frame relaxation dispersion NMR spectroscopy. / Brath, Ulrika; Akke, Mikael; Yang, Daiwen; Kay, Lewis E.; Mulder, Frans A A.

    In: Journal of the American Chemical Society, Vol. 128, No. 17, 03.05.2006, p. 5718-5727.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  82. 2005
  83. Published

    Correlated dynamics of consecutive residues reveal transient and cooperative unfolding of secondary structure in proteins. / Lundström, Patrik; Mulder, F. A A; Akke, Mikael.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 47, 22.11.2005, p. 16984-16989.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  84. 2004
  85. Published

    Conformation and dynamics of ribosomal stalk protein L12 in solution and on the ribosome. / Mulder, Frans A A; Bouakaz, Lamine; Lundell, Anna; Venkataramana, Musturi; Liljas, Anders; Akke, Mikael; Sanyal, Suparna.

    In: Biochemistry, Vol. 43, No. 20, 25.05.2004, p. 5930-5936.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  86. 2003
  87. Published

    Carbonyl 13C transverse relaxation measurements to sample protein backbone dynamics. / Mulder, Frans A A; Akke, Mikael.

    In: Magnetic Resonance in Chemistry, Vol. 41, No. 10, 01.10.2003, p. 853-865.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  88. 2002
  89. Published

    Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniques. / Choy, Wing Yiu; Mulder, Frans A A; Crowhurst, Karin A.; Muhandiram, D. R.; Millett, Ian S.; Doniach, Sebastian; Forman-Kay, Julie D.; Kay, Lewis E.

    In: Journal of Molecular Biology, Vol. 316, No. 1, 16.07.2002, p. 101-112.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  90. Published

    Slow internal dynamics in proteins: Application of NMR relaxation dispersion spectroscopy to methyl groups in a cavity mutant of T4 lysozyme. / Mulder, Frans A A; Hon, Bin; Mittermaier, Anthony; Dahlquist, Frederick W.; Kay, Lewis E.

    In: Journal of the American Chemical Society, Vol. 124, No. 7, 20.02.2002, p. 1443-1451.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  91. 2001
  92. Published

    Slow dynamics in folded and unfolded states of an SH3 domain. / Tollinger, M; Skrynnikov, N R; Mulder, F A; Forman-Kay, J D; Kay, L E.

    In: Journal of the American Chemical Society, Vol. 123, No. 46, 21.11.2001, p. 11341-11352.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  93. Published

    Studying excited states of proteins by NMR spectroscopy. / Mulder, F A; Mittermaier, A; Hon, B; Dahlquist, F W; Kay, L E.

    In: Nature Structural and Molecular Biology, Vol. 8, No. 11, 11.2001, p. 932-935.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  94. Published

    Probing slow time scale dynamics at methyl-containing side chains in proteins by relaxation dispersion NMR measurements : Application to methionine residues in a cavity mutant of T4 lysozyme. / Skrynnikov, N. R.; Mulder, F. A A; Hon, B.; Dahlquist, F. W.; Kay, L. E.

    In: Journal of the American Chemical Society, Vol. 123, No. 19, 14.10.2001, p. 4556-4566.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  95. Published

    Latent and active p53 are identical in conformation. / Ayed, A; Mulder, F A; Yi, G S; Lu, Ying; Kay, L E; Arrowsmith, C H.

    In: Nature Structural and Molecular Biology, Vol. 8, No. 9, 09.2001, p. 756-760.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  96. Published

    Measurement of slow (μs-ms) time scale dynamics in protein side chains by 15N relaxation dispersion NMR spectroscopy : Application to Asn and Gln residues in a cavity mutant of T4 lysozyme. / Mulder, F. A A; Skrynnikov, N. R.; Hon, B.; Dahlquist, F. W.; Kay, L. E.

    In: Journal of the American Chemical Society, Vol. 123, No. 5, 07.02.2001, p. 967-975.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  97. 2000
  98. Published

    Flexibility and ligand exchange in a buried cavity mutant of T4 lysozyme studied by multinuclear NMR. / Mulder, F. A A; Hon, B.; Muhandiram, D. R.; Dahlquist, F. W.; Kay, L. E.

    In: Biochemistry, Vol. 39, No. 41, 17.10.2000, p. 12614-12622.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  99. Published

    Changes in dynamical behavior of the retinoid X receptor DNA-binding domain upon binding to a 14 base-pair DNA half site. / van Tilborg, P J; Czisch, M; Mulder, Frans A. A.; Folkers, G E; Bonvin, A M; Nair, M; Boelens, R; Kaptein, R.

    In: Biochemistry, Vol. 39, No. 30, 01.08.2000, p. 8747-8757.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  100. Published

    Assignment of 1H(N), 15N, 13C(alpha), 13CO and 13C(beta) resonances in a 67 kDa p53 dimer using 4D-TROSY NMR spectroscopy. / Mulder, F A; Ayed, A; Yang, D; Arrowsmith, C H; Kay, L E.

    In: Journal of Biomolecular N M R, Vol. 18, No. 2, 2000, p. 173-176.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  101. 1999
  102. Published

    Altered flexibility in the substrate-binding site of related native and engineered high-alkaline Bacillus subtilisins. / Mulder, F. A A; Schipper, Dick; Bott, Richard; Boelens, Rolf.

    In: Journal of Molecular Biology, Vol. 292, No. 1, 10.09.1999, p. 111-123.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  103. Published

    Microsecond time scale dynamics in the RXR DNA-binding domain from a combination of spin-echo and off-resonance rotating frame relaxation measurements. / Mulder, Frans A. A.; van Tilborg, P J; Kaptein, R; Boelens, R.

    In: Journal of Biomolecular N M R, Vol. 13, No. 3, 03.1999, p. 275-288.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  104. Published

    Millisecond to microsecond time scale dynamics of the retinoid X and retinoic acid receptor DNA-binding domains and dimeric complex formation. / van Tilborg, P J; Mulder, Frans A. A.; de Backer, M M; Nair, M; van Heerde, E C; Folkers, G; van der Saag, P T; Karimi-Nejad, Yasmin ; Boelens, R; Kaptein, R.

    In: Biochemistry, Vol. 38, No. 7, 16.02.1999, p. 1951-1956.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  105. Published

    NMR Studies of the 269 Residue Serine Protease PB92 from Bacillus Alcalophilus. / Brünger, Alex T.; Karimi-Nejad, Yasmin ; Mulder, Frans A.A.; Martin, John R. ; Schipper, Dick; Boelens, Rolf.

    In: NMR in Supramolecular Chemistry, Vol. 526, 1999, p. 227-246.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  106. 1998
  107. Published

    Solution structure and backbone dynamics of the photoactive yellow protein. / Düx, Petra; Rubinstenn, Gilles; Vuister, Geerten W.; Boelens, Rolf; Mulder, Frans A A; Hård, Karl; Hoff, Wouter D.; Kroon, Arthur R.; Crielaard, Wim; Hellingwerf, Klaas J.; Kaptein, Robert.

    In: Biochemistry, Vol. 37, No. 37, 15.09.1998, p. 12689-12699.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  108. Published

    Structural and dynamic changes of photoactive yellow protein during its photocycle in solution. / Rubinstenn, G.; Vuister, G. W.; Mulder, F. A A; Dux, P. E.; Boelens, R.; Hellingwerf, K. J.; Kaptein, R.

    In: Nature Structural Biology, Vol. 5, No. 7, 20.07.1998, p. 568-570.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  109. Published

    An Off-resonance Rotating Frame Relaxation Experiment for the Investigation of Macromolecular Dynamics Using Adiabatic Rotations. / Mulder, Frans A.A.; Graaf, Robin A. de; Kaptein, Robert ; Boelens, Rolf.

    In: Journal of Magnetic Resonance, Vol. 131, No. 2, 04.1998, p. 351-357.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  110. 1997
  111. Published

    Determination of Amide Proton CSA in 15N-Labeled Proteins Using 1H CSA/15N-1H Dipolar and 15N CSA/15N-1H Dipolar Cross-Correlation Rates. / Tessari, Marco; Mulder, Frans A A; Boelens, Rolf; Vuister, Geerten W.

    In: Journal of Magnetic Resonance, Vol. 127, No. 1, 01.07.1997, p. 128-133.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  112. Published

    The solution structure of serine protease PB92 from Bacillus alcalophilus presents a rigid fold with a flexible substrate-binding site. / Martin, J R; Mulder, Frans A A; Karimi-Nejad, Y; van der Zwan, J; Mariani, M; Schipper, D; Boelens, R.

    In: Structure, Vol. 5, No. 4, 15.04.1997, p. 521-532.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  113. 1996
  114. Published

    Improved HSQC experiments for the observation of exchange broadened signals. / Mulder, Frans A A; Spronk, Chris A.E.M; Slijper, M; Kaptein, R; Boelens, R.

    In: Journal of Biomolecular N M R, Vol. 8, No. 2, 09.1996, p. 223-228.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  115. 1995
  116. Published

    Paramagnetic Cross-Correlation Effects in the Longitudinal Proton Relaxation ofcis-Chloroacrylic Acid in the Presence of Nickel(II) Ions. / Mäler, Lena; Mulder, F. A A; Kowalewski, Jozef.

    In: Journal of Magnetic Resonance, Vol. 117, No. 2, 01.12.1995, p. 220-227.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review