Research output per year
Research output per year
- 1 - 50 out of 205 results
Search results
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2024
An APEX2-based proximity-dependent biotinylation assay with temporal specificity to study protein interactions during autophagy in the yeast Saccharomyces cerevisiae
Filali-Mouncef, Y., Leytens, A., Vargas Duarte, P., Zampieri, M., Dengjel, J. & Reggiori, F., 2024, In: Autophagy. 20, 10, p. 2323-2337 15 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access -
An oil-in-gel type of organohydrogel loaded with methylprednisolone for the treatment of secondary injuries following spinal cord traumas
Tan, Y., Lai, T., Li, Y., Tang, Q., Zhang, W., Liu, Q., Wu, S., Peng, X., Sui, X., Reggiori, F., Jiang, X., Chen, Q. & Wang, C., Oct 2024, In: Journal of Controlled Release. 374, p. 505-524 20 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
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Autophagy as an innate immunity response against pathogens: a Tango dance
Aguilera, M. O., Delgui, L. R., Reggiori, F., Romano, P. S. & Colombo, M. I., Jan 2024, In: FEBS Letters. 598, 1, p. 140-166 27 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
5 Citations (Scopus) -
Beyond the C-terminal glycine of ATG8 proteins - The story of some neglected amino acids
Barz, S., Hofmann, K., Reggiori, F. & Kraft, C., 1 Aug 2024, In: Journal of Molecular Biology. 436, 15, p. 168588 168588.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access1 Citation (Scopus) -
Decoding the function of Atg13 phosphorylation reveals a role of Atg11 in bulk autophagy initiation
Bhattacharya, A., Torggler, R., Reiter, W., Romanov, N., Licheva, M., Ciftci, A., Mari, M., Kolb, L., Kaiser, D., Reggiori, F., Ammerer, G., Hollenstein, D. M. & Kraft, C., Feb 2024, In: EMBO Reports. 25, 2, p. 813-831 19 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access2 Citations (Scopus) -
Molecular insights into aggrephagy: Their cellular functions in the context of neurodegenerative diseases
Cóppola Segovia, V. & Reggiori, F., Aug 2024, In: Journal of Molecular Biology. 436, 15, 168493.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access2 Citations (Scopus) -
Phagophore closure, autophagosome maturation and autophagosome fusion during macroautophagy in the yeast Saccharomyces cerevisiae
Kraft, C. & Reggiori, F., Jan 2024, In: FEBS Letters. 598, 1, p. 73-83 11 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
5 Citations (Scopus) -
Small-Molecule Allosteric Inhibitors of Human Aspartate Transcarbamoylase Suppress Proliferation of Bone Osteosarcoma Epithelial Cells
Wang, C., Zhang, B., Cong, Y., Du, X., Chen, S., Visser, L., Ruiz-Moreno, A., Zhang, L., Reggiori, F., Alexander, D. & Groves, M. R., 2 Jul 2024, In: ChemMedChem. 19, 13, p. e202300688 e202300688.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access -
The GTPase activating protein Gyp7 regulates Rab7/Ypt7 activity on late endosomes
Füllbrunn, N., Nicastro, R., Mari, M., Griffith, J., Herrmann, E., Rasche, R., Borchers, A.-C., Auffarth, K., Kümmel, D., Reggiori, F., De Virgilio, C., Langemeyer, L. & Ungermann, C., 3 Jun 2024, In: The Journal of Cell Biology. 223, 6, e202305038.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access -
2023
Atg9 interactions via its transmembrane domains are required for phagophore expansion during autophagy
Chumpen Ramirez, S., Gómez-Sánchez, R., Verlhac, P., Hardenberg, R., Margheritis, E., Cosentino, K., Reggiori, F. & Ungermann, C., May 2023, In: Autophagy. 19, 5, p. 1459-1478 20 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open AccessFile21 Citations (Scopus)1 Downloads (Pure) -
Digest it all: the lysosomal turnover of cytoplasmic aggregates
Mauthe, M., Kampinga, H. H., Hipp, M. S. & Reggiori, F., Mar 2023, In: Trends in Biochemical Sciences. 48, 3, p. 216-228 13 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access8 Citations (Scopus) -
Getting on the right track: Interactions between viruses and the cytoskeletal motor proteins
Río-Bergé, C., Cong, Y. & Reggiori, F., Mar 2023, In: Traffic. 24, 3, p. 114-130 17 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access3 Citations (Scopus) -
Heteromeric clusters of ubiquitinated ER-shaping proteins drive ER-phagy
Foronda, H., Fu, Y., Covarrubias-Pinto, A., Bocker, H. T., González, A., Seemann, E., Franzka, P., Bock, A., Bhaskara, R. M., Liebmann, L., Hoffmann, M. E., Katona, I., Koch, N., Weis, J., Kurth, I., Gleeson, J. G., Reggiori, F., Hummer, G., Kessels, M. M. & Qualmann, B. & 3 others, , Jun 2023, In: Nature. 618, 7964, p. 402-410Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open AccessFile30 Citations (Scopus)3 Downloads (Pure) -
Mammalian ATG8 proteins maintain autophagosomal membrane integrity through ESCRTs
Javed, R., Jain, A., Duque, T., Hendrix, E., Paddar, M. A., Khan, S., Claude-Taupin, A., Jia, J., Allers, L., Wang, F., Mudd, M., Timmins, G., Lidke, K., Rusten, T. E., Akepati, P. R., He, Y., Reggiori, F., Eskelinen, E.-L. & Deretic, V., 17 Jul 2023, In: The EMBO Journal. 42, 14, e112845.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
8 Citations (Scopus) -
Mitochondrial protein BNIP3 regulates Chikungunya virus replication in the early stages of infection
Echavarria-Consuegra, L., Dinesh Kumar, N., van der Laan, M., Mauthe, M., Van de Pol, D., Reggiori, F. & Smit, J. M., Nov 2023, In: PLOS Neglected Tropical Diseases . 17, 11, p. ´ e0010751.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access1 Citation (Scopus) -
TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1
Zhou, J., Rasmussen, N. L., Olsvik, H. L., Akimov, V., Hu, Z., Evjen, G., Kaeser-Pebernard, S., Sankar, D. S., Roubaty, C., Verlhac, P., van de Beck, N., Reggiori, F., Abudu, Y. P., Blagoev, B., Lamark, T., Johansen, T. & Dengjel, J., Feb 2023, In: The Journal of Cell Biology. 222, 2, 28 p., e202108144.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open AccessFile10 Citations (Scopus)2 Downloads (Pure) -
The dynamin Vps1 mediates Atg9 transport to the sites of autophagosome formation
Arlt, H., Raman, B., Filali-Mouncef, Y., Hu, Y., Leytens, A., Hardenberg, R., Guimarães, R., Kriegenburg, F., Mari, M., Smaczynska-de Rooij, I. I., Ayscough, K. R., Dengjel, J., Ungermann, C. & Reggiori, F., May 2023, In: The Journal of Biological Chemistry. 299, 5, 18 p., 104712.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access3 Citations (Scopus) -
The Organization and Function of the Phagophore-ER Membrane Contact Sites
Vargas Duarte, P. & Reggiori, F., Jan 2023, In: Contact. 6Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access4 Citations (Scopus) -
The yeast dynamin-like GTPase Vps1 mediates Atg9 transport to the phagophore assembly site in Saccharomyces cerevisiae
Hu, Y. & Reggiori, F., 17 Aug 2023, In: Autophagy Reports. 2, 1, p. 2247309Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access -
2022
An optimized protocol for immuno-electron microscopy of endogenous LC3
De Mazière, A., van der Beek, J., van Dijk, S., de Heus, C., Reggiori, F., Koike, M. & Klumperman, J., 2022, In: Autophagy. 18, 12, p. 3004-3022 19 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
8 Citations (Scopus) -
Autophagy induction during stem cell activation plays a key role in salivary gland self-renewal
Orhon, I., Rocchi, C., Villarejo-Zori, B., Serrano Martinez, P., Baanstra, M., Brouwer, U., Boya, P., Coppes, R. & Reggiori, F., Feb 2022, In: Autophagy. 18, 2, p. 293-308 16 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access9 Citations (Scopus) -
ER-phagy: mechanisms, regulation, and diseases connected to the lysosomal clearance of the endoplasmic reticulum
Reggiori, F. & Molinari, M., 1 Jul 2022, In: Physiological Reviews. 102, 3, p. 1393-1448 56 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access72 Citations (Scopus) -
ER-phagy requires the assembly of actin at sites of contact between the cortical ER and endocytic pits
Liu, D., Mari, M., Li, X., Reggiori, F., Ferro-Novick, S. & Novick, P., 8 Feb 2022, In: Proceedings of the National Academy of Sciences (PNAS). 119, 6, 11 p., e2117554119.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access15 Citations (Scopus) -
Membrane Contact Sites in Autophagy
Zwilling, E. & Reggiori, F., Dec 2022, In: Cells. 11, 23, 16 p., 3813.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access5 Citations (Scopus) -
Molecular regulation of autophagosome formation
Hu, Y. & Reggiori, F., 28 Feb 2022, In: Biochemical Society Transactions. 50, 1, p. 55-69 15 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access55 Citations (Scopus) -
mTORC1 controls Golgi architecture and vesicle secretion by phosphorylation of SCYL1
Kaeser-Pebernard, S., Vionnet, C., Mari, M., Sankar, D. S., Hu, Z., Roubaty, C., Martínez-Martínez, E., Zhao, H., Spuch-Calvar, M., Petri-Fink, A., Rainer, G., Steinberg, F., Reggiori, F. & Dengjel, J., Aug 2022, In: Nature Communications. 13, 1, 21 p., 4685.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access9 Citations (Scopus) -
Phospholipid imbalance impairs autophagosome completion
Polyansky, A., Shatz, O., Fraiberg, M., Shimoni, E., Dadosh, T., Mari, M., Reggiori, F. M., Qin, C., Han, X. & Elazar, Z., Dec 2022, In: The EMBO Journal. 41, 23, e110771.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open AccessFile14 Citations (Scopus)37 Downloads (Pure) -
Phosphoregulation of the autophagy machinery by kinases and phosphatases
Licheva, M., Raman, B., Kraft, C. & Reggiori, F., Jan 2022, In: Autophagy. 18, 1, p. 104-123 20 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access35 Citations (Scopus) -
Post-transcriptional regulation of ATG1 is a critical node that modulates autophagy during distinct nutrient stresses
Lahiri, V., Metur, S. P., Hu, Z., Song, X., Mari, M., Hawkins, W. D., Bhattarai, J., Delorme-Axford, E., Reggiori, F., Tang, D., Dengjel, J. & Klionsky, D. J., Jul 2022, In: Autophagy. 18, 7, p. 1694-1714 21 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
8 Citations (Scopus) -
The lipid flippase Drs2 regulates anterograde transport of Atg9 during autophagy
Kriegenburg, F., Huiting, W., van Buuren-Broek, F., Zwilling, E., Hardenberg, R., Mari, M. C., Kraft, C. & Reggiori, F. M., 2022, In: Autophagy Reports. 1, 1, p. 345-367 23 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access -
The mechanism of Macroautophagy: The movie
Reggiori, F. M., Boya, P., da Costa, D., Elazar, Z., Eskelinen, E.-L., Farrés, J., Guettler, S., Kraft, C., Jungbluth, H., Martinez, A., Morel, E., Pless, O., Proikas-Cezanne, T. & Simonsen, A., Sept 2022, In: Autophagy Reports. 1, 1, p. 414-417 3 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access1 Citation (Scopus) -
The ménage à trois of autophagy, lipid droplets and liver disease
Filali-Mouncef, Y., Hunter, C., Roccio, F., Zagkou, S., Dupont, N., Primard, C., Proikas-Cezanne, T. & Reggiori, F., Jan 2022, In: Autophagy. 18, 1, p. 50-72 23 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open Access166 Citations (Scopus) -
The surface of lipid droplets constitutes a barrier for endoplasmic reticulum-resident integral membrane proteins
Khaddaj, R., Mari, M., Cottier, S., Reggiori, F. & Schneiter, R., 1 Mar 2022, In: Journal of Cell Science. 135, 5, 13 p., jcs256206.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access13 Citations (Scopus) -
The yeast LYST homolog Bph1 is a Rab5 effector and prevents Atg8 lipidation at endosomes
Vargas Duarte, P., Hardenberg, R., Mari, M., Walter, S., Reggiori, F., Fröhlich, F., González Montoro, A. & Ungermann, C., 15 Apr 2022, In: Journal of Cell Science. 135, 8, 16 p., 259421.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access2 Citations (Scopus) -
Transcriptomic changes in autophagy-related genes are inversely correlated with inflammation and are associated with multiple sclerosis lesion pathology
Misrielal, C., Alsema, A. M., Wijering, M. H. C., Miedema, A., Mauthe, M., Reggiori, F. & Eggen, B. J. L., Nov 2022, In: Brain, Behavior, and Immunity - Health. 25, 100510.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access3 Citations (Scopus) -
Wait, can you remind me just why we need another journal focused on autophagy?
Klionsky, D. J. & Reggiori, F. M., 2022, In: Autophagy Reports. 1, 1, p. 1-4 4 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Editorial › peer-review
Open Access -
2021
ATF4 links ER stress with reticulophagy in glioblastoma cells
Zielke, S., Kardo, S., Zein, L., Mari, M., Covarrubias-Pinto, A., Kinzler, M. N., Meyer, N., Stolz, A., Fulda, S., Reggiori, F., Kögel, D. & van Wijk, S., Sept 2021, In: Autophagy. 17, 9, p. 2432-2448 17 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access83 Citations (Scopus) -
ATG9A protects the plasma membrane from programmed and incidental permeabilization
Claude-Taupin, A., Jia, J., Bhujabal, Z., Garfa-Traoré, M., Kumar, S., da Silva, G. P. D., Javed, R., Gu, Y., Allers, L., Peters, R., Wang, F., da Costa, L. J., Pallikkuth, S., Lidke, K. A., Mauthe, M., Verlhac, P., Uchiyama, Y., Salemi, M., Phinney, B. & Tooze, S. A. & 4 others, , Aug 2021, In: Nature Cell Biology. 23, 8, p. 846-858 13 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
Open Access38 Citations (Scopus) -
Autophagy in major human diseases
Klionsky, D. J., Petroni, G., Amaravadi, R. K., Baehrecke, E. H., Ballabio, A., Boya, P., Bravo-San Pedro, J. M., Cadwell, K., Cecconi, F., Choi, A. M. K., Choi, M. E., Chu, C. T., Codogno, P., Colombo, M. I., Cuervo, A. M., Deretic, V., Dikic, I., Elazar, Z., Eskelinen, E.-L. & Fimia, G. M. & 39 others, , 1 Oct 2021, In: The EMBO Journal. 40, 19, p. e108863 e108863.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
Open AccessFile833 Citations (Scopus)60 Downloads (Pure) -
ER-Phagy, ER Homeostasis, and ER Quality Control: Implications for Disease
Ferro-Novick, S., Reggiori, F. & Brodsky, J. L., Aug 2021, In: Trends in Biochemical Sciences. 46, 8, p. 630-639 10 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
82 Citations (Scopus) -
Glycans in autophagy, endocytosis and lysosomal functions
Reggiori, F., Gabius, H.-J., Aureli, M., Römer, W., Sonnino, S. & Eskelinen, E.-L., Oct 2021, In: Glycoconjugate Journal. 38, 5, p. 625-647 23 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
17 Citations (Scopus) -
How Viruses Hijack and Modify the Secretory Transport Pathway
Hassan, Z., Kumar, N. D., Reggiori, F. & Khan, G., 24 Sept 2021, In: Cells. 10, 10, 2535.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
20 Citations (Scopus) -
HSBP1 Is a Novel Interactor of FIP200 and ATG13 That Promotes Autophagy Initiation and Picornavirus Replication
Mauthe, M., Dinesh Kumar, N., Verlhac, P., van de Beek, N. & Reggiori, F., 2021, In: Frontiers in cellular and infection microbiology. 11, p. 745640 745640.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
1 Citation (Scopus) -
Inhibition of IRGM establishes a robust antiviral immune state to restrict pathogenic viruses
Nath, P., Chauhan, N. R., Jena, K. K., Datey, A., Kumar, N. D., Mehto, S., De, S., Nayak, T. K., Priyadarsini, S., Rout, K., Bal, R., Murmu, K. C., Kalia, M., Patnaik, S., Prasad, P., Reggiori, F., Chattopadhyay, S. & Chauhan, S., 4 Nov 2021, In: EMBO Reports. 22, 11, p. e52948 e52948.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
17 Citations (Scopus) -
Membrane supply and remodeling during autophagosome biogenesis
Gómez-Sánchez, R., Tooze, S. A. & Reggiori, F., Aug 2021, In: Current Opinion in Cell Biology. 71, p. 112-119 8 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
61 Citations (Scopus) -
Parkinson's disease-associated VPS35 mutant reduces mitochondrial membrane potential and impairs PINK1/Parkin-mediated mitophagy
Ma, K. Y., Fokkens, M. R., Reggiori, F., Mari, M. & Verbeek, D. S., 15 Jun 2021, In: Translational neurodegeneration. 10, 1, p. 19 19.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
27 Citations (Scopus) -
Retinyl esters form lipid droplets independently of triacylglycerol and seipin
Molenaar, M. R., Yadav, K. K., Toulmay, A., Wassenaar, T. A., Mari, M. C., Caillon, L., Chorlay, A., Lukmantara, I. E., Haaker, M. W., Wubbolts, R. W., Houweling, M., Vaandrager, A. B., Prieur, X., Reggiori, F., Choudhary, V., Yang, H., Schneiter, R., Thiam, A. R., Prinz, W. A. & Helms, J. B., 4 Oct 2021, In: The Journal of Cell Biology. 220, 10, e202011071.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
23 Citations (Scopus) -
Spatial control of avidity regulates initiation and progression of selective autophagy
Hollenstein, D. M., Licheva, M., Konradi, N., Schweida, D., Mancilla, H., Mari, M., Reggiori, F. & Kraft, C., 10 Dec 2021, In: Nature Communications. 12, 1, p. 7194 7194.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Journal article › Research › peer-review
14 Citations (Scopus) -
WDR45, one gene associated with multiple neurodevelopmental disorders
Cong, Y., So, V., Tijssen, M. A. J., Verbeek, D. S., Reggiori, F. & Mauthe, M., Dec 2021, In: Autophagy. 17, 12, p. 3908-3923 16 p.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
29 Citations (Scopus) -
2020
Autophagy in Multiple Sclerosis: Two Sides of the Same Coin
Misrielal, C., Mauthe, M., Reggiori, F. & Eggen, B. J. L., 2020, In: Frontiers in Cellular Neuroscience. 14, p. 603710 603710.Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaper › Review › Research › peer-review
35 Citations (Scopus)