Aarhus University Seal / Aarhus Universitets segl

Erik Baatrup

Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond

Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

Standard

Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond. / Kalueff, Allan V; Gebhardt, Michael; Stewart, Adam Michael; Cachat, Jonathan M; Brimmer, Mallorie; Chawla, Jonathan S; Craddock, Cassandra; Kyzar, Evan J; Roth, Andrew; Landsman, Samuel; Gaikwad, Siddharth; Robinson, Kyle; Baatrup, Erik; Tierney, Keith; Shamchuk, Angela; Norton, William; Miller, Noam; Nicolson, Teresa; Braubach, Oliver; Gilman, Charles P; Pittman, Julian; Rosemberg, Denis B; Gerlai, Robert; Echevarria, David; Lamb, Elisabeth; Neuhauss, Stephan C F; Weng, Wei; Bally-Cuif, Laure; Schneider, Henning; Zebrafish Neuroscience Research Consortium.

In: Zebrafish, Vol. 10, No. 1, 03.2013, p. 70-86.

Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

Harvard

Kalueff, AV, Gebhardt, M, Stewart, AM, Cachat, JM, Brimmer, M, Chawla, JS, Craddock, C, Kyzar, EJ, Roth, A, Landsman, S, Gaikwad, S, Robinson, K, Baatrup, E, Tierney, K, Shamchuk, A, Norton, W, Miller, N, Nicolson, T, Braubach, O, Gilman, CP, Pittman, J, Rosemberg, DB, Gerlai, R, Echevarria, D, Lamb, E, Neuhauss, SCF, Weng, W, Bally-Cuif, L, Schneider, H & Zebrafish Neuroscience Research Consortium 2013, 'Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond', Zebrafish, vol. 10, no. 1, pp. 70-86. https://doi.org/10.1089/zeb.2012.0861

APA

Kalueff, A. V., Gebhardt, M., Stewart, A. M., Cachat, J. M., Brimmer, M., Chawla, J. S., ... Zebrafish Neuroscience Research Consortium (2013). Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond. Zebrafish, 10(1), 70-86. https://doi.org/10.1089/zeb.2012.0861

CBE

Kalueff AV, Gebhardt M, Stewart AM, Cachat JM, Brimmer M, Chawla JS, Craddock C, Kyzar EJ, Roth A, Landsman S, Gaikwad S, Robinson K, Baatrup E, Tierney K, Shamchuk A, Norton W, Miller N, Nicolson T, Braubach O, Gilman CP, Pittman J, Rosemberg DB, Gerlai R, Echevarria D, Lamb E, Neuhauss SCF, Weng W, Bally-Cuif L, Schneider H, Zebrafish Neuroscience Research Consortium. 2013. Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond. Zebrafish. 10(1):70-86. https://doi.org/10.1089/zeb.2012.0861

MLA

Vancouver

Kalueff AV, Gebhardt M, Stewart AM, Cachat JM, Brimmer M, Chawla JS et al. Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond. Zebrafish. 2013 Mar;10(1):70-86. https://doi.org/10.1089/zeb.2012.0861

Author

Kalueff, Allan V ; Gebhardt, Michael ; Stewart, Adam Michael ; Cachat, Jonathan M ; Brimmer, Mallorie ; Chawla, Jonathan S ; Craddock, Cassandra ; Kyzar, Evan J ; Roth, Andrew ; Landsman, Samuel ; Gaikwad, Siddharth ; Robinson, Kyle ; Baatrup, Erik ; Tierney, Keith ; Shamchuk, Angela ; Norton, William ; Miller, Noam ; Nicolson, Teresa ; Braubach, Oliver ; Gilman, Charles P ; Pittman, Julian ; Rosemberg, Denis B ; Gerlai, Robert ; Echevarria, David ; Lamb, Elisabeth ; Neuhauss, Stephan C F ; Weng, Wei ; Bally-Cuif, Laure ; Schneider, Henning ; Zebrafish Neuroscience Research Consortium. / Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond. In: Zebrafish. 2013 ; Vol. 10, No. 1. pp. 70-86.

Bibtex

@article{505d1be2fda6422db7dd6d119acd0b21,
title = "Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond",
abstract = "Zebrafish (Danio rerio) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screening contribute to the growing utility of zebrafish models in this field. Understanding zebrafish behavioral phenotypes provides important insights into neural pathways, physiological biomarkers, and genetic underpinnings of normal and pathological brain function. Novel zebrafish paradigms continue to appear with an encouraging pace, thus necessitating a consistent terminology and improved understanding of the behavioral repertoire. What can zebrafish 'do', and how does their altered brain function translate into behavioral actions? To help address these questions, we have developed a detailed catalog of zebrafish behaviors (Zebrafish Behavior Catalog, ZBC) that covers both larval and adult models. Representing a beginning of creating a more comprehensive ethogram of zebrafish behavior, this effort will improve interpretation of published findings, foster cross-species behavioral modeling, and encourage new groups to apply zebrafish neurobehavioral paradigms in their research. In addition, this glossary creates a framework for developing a zebrafish neurobehavioral ontology, ultimately to become part of a unified animal neurobehavioral ontology, which collectively will contribute to better integration of biological data within and across species.",
keywords = "Animals, Behavior, Animal, Female, Larva, Male, Nervous System Physiological Phenomena, Sex Characteristics, Terminology as Topic, Zebrafish",
author = "Kalueff, {Allan V} and Michael Gebhardt and Stewart, {Adam Michael} and Cachat, {Jonathan M} and Mallorie Brimmer and Chawla, {Jonathan S} and Cassandra Craddock and Kyzar, {Evan J} and Andrew Roth and Samuel Landsman and Siddharth Gaikwad and Kyle Robinson and Erik Baatrup and Keith Tierney and Angela Shamchuk and William Norton and Noam Miller and Teresa Nicolson and Oliver Braubach and Gilman, {Charles P} and Julian Pittman and Rosemberg, {Denis B} and Robert Gerlai and David Echevarria and Elisabeth Lamb and Neuhauss, {Stephan C F} and Wei Weng and Laure Bally-Cuif and Henning Schneider and {Zebrafish Neuroscience Research Consortium}",
year = "2013",
month = "3",
doi = "10.1089/zeb.2012.0861",
language = "English",
volume = "10",
pages = "70--86",
journal = "Zebrafish",
issn = "1545-8547",
publisher = "Mary AnnLiebert, Inc. Publishers",
number = "1",

}

RIS

TY - JOUR

T1 - Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond

AU - Kalueff, Allan V

AU - Gebhardt, Michael

AU - Stewart, Adam Michael

AU - Cachat, Jonathan M

AU - Brimmer, Mallorie

AU - Chawla, Jonathan S

AU - Craddock, Cassandra

AU - Kyzar, Evan J

AU - Roth, Andrew

AU - Landsman, Samuel

AU - Gaikwad, Siddharth

AU - Robinson, Kyle

AU - Baatrup, Erik

AU - Tierney, Keith

AU - Shamchuk, Angela

AU - Norton, William

AU - Miller, Noam

AU - Nicolson, Teresa

AU - Braubach, Oliver

AU - Gilman, Charles P

AU - Pittman, Julian

AU - Rosemberg, Denis B

AU - Gerlai, Robert

AU - Echevarria, David

AU - Lamb, Elisabeth

AU - Neuhauss, Stephan C F

AU - Weng, Wei

AU - Bally-Cuif, Laure

AU - Schneider, Henning

AU - Zebrafish Neuroscience Research Consortium

PY - 2013/3

Y1 - 2013/3

N2 - Zebrafish (Danio rerio) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screening contribute to the growing utility of zebrafish models in this field. Understanding zebrafish behavioral phenotypes provides important insights into neural pathways, physiological biomarkers, and genetic underpinnings of normal and pathological brain function. Novel zebrafish paradigms continue to appear with an encouraging pace, thus necessitating a consistent terminology and improved understanding of the behavioral repertoire. What can zebrafish 'do', and how does their altered brain function translate into behavioral actions? To help address these questions, we have developed a detailed catalog of zebrafish behaviors (Zebrafish Behavior Catalog, ZBC) that covers both larval and adult models. Representing a beginning of creating a more comprehensive ethogram of zebrafish behavior, this effort will improve interpretation of published findings, foster cross-species behavioral modeling, and encourage new groups to apply zebrafish neurobehavioral paradigms in their research. In addition, this glossary creates a framework for developing a zebrafish neurobehavioral ontology, ultimately to become part of a unified animal neurobehavioral ontology, which collectively will contribute to better integration of biological data within and across species.

AB - Zebrafish (Danio rerio) are rapidly gaining popularity in translational neuroscience and behavioral research. Physiological similarity to mammals, ease of genetic manipulations, sensitivity to pharmacological and genetic factors, robust behavior, low cost, and potential for high-throughput screening contribute to the growing utility of zebrafish models in this field. Understanding zebrafish behavioral phenotypes provides important insights into neural pathways, physiological biomarkers, and genetic underpinnings of normal and pathological brain function. Novel zebrafish paradigms continue to appear with an encouraging pace, thus necessitating a consistent terminology and improved understanding of the behavioral repertoire. What can zebrafish 'do', and how does their altered brain function translate into behavioral actions? To help address these questions, we have developed a detailed catalog of zebrafish behaviors (Zebrafish Behavior Catalog, ZBC) that covers both larval and adult models. Representing a beginning of creating a more comprehensive ethogram of zebrafish behavior, this effort will improve interpretation of published findings, foster cross-species behavioral modeling, and encourage new groups to apply zebrafish neurobehavioral paradigms in their research. In addition, this glossary creates a framework for developing a zebrafish neurobehavioral ontology, ultimately to become part of a unified animal neurobehavioral ontology, which collectively will contribute to better integration of biological data within and across species.

KW - Animals

KW - Behavior, Animal

KW - Female

KW - Larva

KW - Male

KW - Nervous System Physiological Phenomena

KW - Sex Characteristics

KW - Terminology as Topic

KW - Zebrafish

U2 - 10.1089/zeb.2012.0861

DO - 10.1089/zeb.2012.0861

M3 - Journal article

C2 - 23590400

VL - 10

SP - 70

EP - 86

JO - Zebrafish

JF - Zebrafish

SN - 1545-8547

IS - 1

ER -