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Daniel Otzen

  1. Journal article
  2. Published

    Generic Structures of Cytotoxic Liprotides : Nano-Sized Complexes with Oleic Acid Cores and Shells of Disordered Proteins. / Kaspersen, Jørn D; Pedersen, Jannik N; Hansted, Jon G; Nielsen, Søren B; Sakthivel, Srinivasan; Wilhelm, Kristina; Nemashkalova, Ekaterina L; Permyakov, Sergei E; Permyakov, Eugene A; Pinto Oliveira, Cristiano Luis; Morozova-Roche, Ludmilla A; Otzen, Daniel; Pedersen, Jan Skov.

    In: ChemBioChem, Vol. 10, No. 18, 12.2014, p. 2693-2702.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  3. Published

    Low-Resolution Structures of OmpA⋅DDM Protein-Detergent Complexes. / Kaspersen, Jørn; Moestrup Jessen, Christian; Stougaard Vad, Brian; Skipper Sørensen, Esben; Kleiner Andersen, Kell; Glasius, Marianne; Pinto Oliveira, Cristiano Luis; Otzen, Daniel; Pedersen, Jan Skov.

    In: ChemBioChem, Vol. 15, No. 14, 19.08.2014, p. 2113-2124.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. Published

    Refolding of SDS-Unfolded Proteins by Nonionic Surfactants. / Kaspersen, Jørn Døvling; Søndergaard, Anne; Madsen, Daniel Jhaf; Otzen, Daniel E; Pedersen, Jan Skov.

    In: Biophysical Journal, Vol. 112, No. 8, 25.04.2017, p. 1609-1620.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  5. Published

    Proteomic changes in response to chromium(VI) toxicity in Pseudomonas aeruginosa . / Kilic, Nur; Stensballe, Allan; Otzen, Daniel; Dönmez, G.

    In: Bioresource Technology, Vol. 101, 2009, p. 2134-2140.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  6. Published

    Detection of pathogenic biofilms with bacterial amyloid targeting fluorescent probe, CDy11. / Kim, Jun-Young; Sahu, Srikanta; Yau, Yin-Hoe; Wang, Xu; Shochat, Susana Geifman; Nielsen, Per Halkjær; Dueholm, Morten Simonsen; Otzen, Daniel E; Lee, Jungyeol; Delos Santos, May Margarette Salido; Yam, Joey Kuok Hoong; Kang, Nam-Young; Park, Sung-Jin; Kwon, Hawyoung; Seviour, Thomas William; Yang, Liang; Givskov, Michael; Chang, Young-Tae.

    In: Journal of the American Chemical Society, 2016, p. 402-407.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  7. Published

    The influence of vesicle composition and size on a-synuclein structure and stability. / Kjær, Lars; Giehm, Lise; Heimburg, Thomas Rainer; Otzen, Daniel.

    In: Biophysical Journal, Vol. 96, 2009.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  8. Published

    Condenser : A statistical aggregation tool for multi-sample quantitative proteomic data from Matrix Science Mascot Distiller™. / Knudsen, Anders Dahl; Bennike, Tue; Kjeldal, Henrik; Birkelund, Svend; Otzen, Daniel; Stensballe, Allan.

    In: Journal of Proteomics, Vol. 103, 30.05.2014, p. 261-266.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  9. Published

    Effect of glycosylation on biphysical and flocculative properties of the extracellular domain of Ag43. / Knudsen, S. K.; Westergaard, U. B.; Frantzmann, M.; Stensballe, A.; Otzen, Daniel.

    In: Biochemical Journal, No. 412, 2008, p. 563-577.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  10. Published

    A monomer-trimer model supports intermittent glucagon fibril growth. / Košmrlj, Andrej; Cordsen, Pia; Kyrsting, Anders; Otzen, Daniel; Oddershede, Lene B; Jensen, Mogens H.

    In: Scientific Reports, Vol. 5, 9005, 11.03.2015, p. 1-6.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  11. Published

    SDS-induced multi-stage unfolding of a small globular protein through different denatured states revealed by single-molecule fluorescence. / Krainer, Georg; Hartmann, Andreas; Bogatyr, Vadim; Nielsen, Janni; Schlierf, Michael; Otzen, Daniel E.

    In: Chemical Science, Vol. 11, No. 34, 09.2020, p. 9141-9153.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  12. Published

    Sequential pH-driven dimerization and stabilization of the N-terminal domain enables rapid spider silk formation. / Kronqvist, Nina; Otikovs, Martins; Chmyrov, Volodymyr; Chen, Gefei; Andersson, Marlene; Nordling, Kerstin; Landreh, Michael; Sarr, Médoune; Jörnvall, Hans; Wennmalm, Stefan; Widengren, Jerker; Meng, Qing; Rising, Anna; Otzen, Daniel; Knight, Stefan D; Jaudzems, Kristaps; Johansson, Jan.

    In: Nature Communications, Vol. 5, 3254, 10.02.2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  13. Published

    Near-complete 1H, 13C, 15N resonance assignments of dimethylsulfoxide-denatured TGFBIp FAS1-4 A546T. / Kulminskaya, Natalia V; Yoshimura, Yuichi; Runager, Kasper; Sørensen, Charlotte S; Bjerring, Morten; Andreasen, Maria; Otzen, Daniel E; Enghild, Jan J; Nielsen, Niels Christian; Mulder, Frans A A.

    In: Biomolecular N M R Assignments, Vol. 10, No. 1, 2016, p. 25-29.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  14. Published

    Potent α-Synuclein Aggregation Inhibitors, Identified by High-Throughput Screening, Mainly Target the Monomeric State. / Kurnik, Martin; Sahin, Cagla; Andersen, Camilla Bertel; Lorenzen, Nikolai; Giehm, Lise; Mohammad-Beigi, Hossein; Jessen, Christian Moestrup; Pedersen, Jan Skov; Christiansen, Gunna; Petersen, Steen Vang; Staal, Roland; Krishnamurthy, Girija; Pitts, Keith; Reinhart, Peter H; Mulder, Frans A A; Mente, Scot; Hirst, Warren D; Otzen, Daniel E.

    In: Cell Chemical Biology, Vol. 25, No. 11, 15.11.2018, p. 1389-1402.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  15. Published

    Amyloid adhesins are abundant in natural biofilms. / Larsen, Per; Dueholm, Morten Simonsen; Christiansen, G.; Nielsen, J. L.; Otzen, Daniel; Nielsen, P. H.

    In: Env. Microbiol., No. 9, 2007, p. 3077-3090.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  16. Published

    Amyloid-like adhesins in floc-forming and filamentous bacteria in activated sludge. / Larsen, Per; Nielsen, J. L.; Otzen, Daniel.

    In: Applied and Environmental Microbiology, Vol. 74, 2008, p. 1517-1526.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  17. Published

    Molecular characteristics of porcine alpha-synuclein splicing variants. / Larsen, Knud; Bæk, Rikke; Sahin, Cagla; Kjær, Lars; Christiansen, Gunna; Nielsen, Janni; Farajzadeh, Leila; Otzen, Daniel E.

    In: Biochimie, Vol. 180, 01.2021, p. 121-133.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  18. Published

    Influence of tunable external stimuli on the self-assembly of guanosine supramolecular nanostructures studied by atomic force microscope. / Li, Y.; Dong, Mingdong; Otzen, Daniel; Yao, Y.; Liu, B.; Besenbacher, Flemming; Mamdouh, Wael.

    In: Langmuir, Vol. 25, 2009.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  19. Published

    Folding of circular permutants with decreased contact order : General trend balanced by protein stability. / Lindberg, Magnus O.; Tångrot, Jeanette; Otzen, Daniel E.; Dolgikh, Dmitry A.; Finkelstein, Alexei V.; Oliveberg, Mikael.

    In: Journal of Molecular Biology, Vol. 314, No. 4, 07.12.2001, p. 891-900.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. Published

    Electrochemical Analysis of the Fibrillation of Parkinson's Disease α-synuclein. / Lopes, Paula; Dyrnesli, Hans; Lorenzen, Nikolai; Otzen, Daniel; Ferapontova, Elena.

    In: Analyst, Vol. 139, No. 4, 2014, p. 749-756.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  21. Published

    How epigallocatechin gallate can inhibit α-synuclein oligomer toxicity in vitro. / Lorenzen, Nikolai; Nielsen, Søren B.; Yoshimura, Yuichi; Vad, Brian S.; Andersen, Camilla Bertel; Betzer, Cristine; Kaspersen, Jørn D.; Christiansen, Gunna; Pedersen, Jan Skov; Jensen, Poul Henning; Mulder, Frans A A; Otzen, Daniel E.

    In: Journal of Biological Chemistry, Vol. 289, No. 31, 01.08.2014, p. 21299-21310.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  22. Published

    Oligomers of α-synuclein : picking the culprit in the line-up. / Lorenzen, Nikolai; Otzen, Daniel.

    In: Essays in Biochemistry, Vol. 56, No. 1, 18.08.2014, p. 137-148.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  23. Published

    Role of elongation and secondary pathways in S6 amyloid fibril growth. / Lorenzen, N.; Cohen, S.I.A.; Nielsen, Søren Bang; Herling, T.W.; Christiansen, G.; Dobson, C.M.; T. P. Knowles, Tuomas; Otzen, D.

    In: Biophysical Journal, Vol. 102, No. 9, 02.05.2012, p. 2167-2175.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  24. Published

    The N-terminus of α-synuclein is essential for both monomeric and oligomeric interactions with membranes. / Lorenzen, Nikolai; Lemminger, Lasse; Pedersen, Jannik Nedergaard; Nielsen, Søren Bang; Otzen, Daniel.

    In: FEBS Letters, Vol. 588, No. 3, 31.01.2014, p. 497-502.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  25. Published

    The role of stable α-synuclein oligomers in the molecular events underlying amyloid formation. / Lorenzen, Nikolai; Nielsen, Søren Bang; Buell, Alexander K. ; Kaspersen, Jørn Døvling; Arosio, Paolo; Vad, Brian Stougaard; Paslawski, Wojciech; Christiansen, Gunna; Valnickova Hansen, Zuzana; Andreasen, Maria; Enghild, Jan Johannes; Pedersen, Jan Skov; Dobson, Christopher M; Knowles, Tuomas P J; Otzen, Daniel.

    In: Journal of the American Chemical Society, Vol. 136, No. 10, 16.02.2014, p. 3859-3868.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  26. Published

    Mechanical stress affects glucagon fibrillation kinetics and fibril structure. / Macchi, Francesca; Hoffmann, Søren Vrønning; Carlsen, Martin; Vad, Brian S; Imparato, Alberto; Rischel, Christian; Otzen, Daniel.

    In: Langmuir, Vol. 27, No. 20, 2011, p. 12539–12549.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

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