Aarhus University Seal / Aarhus Universitets segl

Andreas Schramm

  1. 2019
  2. Published

    Microalgae-bacteria symbiosis in microalgal growth and biofuel production : a review. / Yao, S.; Lyu, S.; An, Y.; Lu, J.; Gjermansen, C.; Schramm, A.

    In: Journal of Applied Microbiology, Vol. 126, No. 2, 02.2019, p. 359-368.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  3. Accepted/In press

    Single-cell amplified genomes of two uncultivated members of the deltaproteobacterial SEEP-SRB1 clade, isolated from marine sediment. / Petro, Caitlin; Jochum, Lara M.; Schreiber, Lars; Marshall, Ian P.G.; Schramm, Andreas; Kjeldsen, Kasper U.

    In: Marine Genomics, 01.01.2019.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  4. Unpublished

    Dissimilatory nitrate reduction in freshwater cable bacteria. / Marzocchi, Ugo; Thorup, Casper; Dam, Ann-Sofie; Schramm, Andreas; Risgaard-Petersen, Nils.

    2019. Abstract from ISME 17 - 17th International Symposium on Microbial Ecology, Leipzig, Germany.

    Research output: Contribution to conferenceConference abstract for conferenceCommunication

  5. Published

    Meta-analysis of cable bacteria and their associates in existing next-generation sequencing datasets: cables are everywhere. / Marshall, Ian P.G.; Burdorf, Laurine D. W.; Schramm, Andreas.

    2019. Poster session presented at Electromicrobiology 2019, Aarhus, Denmark.

    Research output: Contribution to conferencePosterResearch

  6. 2018
  7. Published

    Colitis and microbiota - a study on weaned piglets with dextran sodium sulfate-induced colitis. / Nielsen, Katrine Dalby; Schramm, Andreas; Purup, Stig; Canibe, Nuria.

    2018. Poster session presented at Danish Microbiological Society Annual Congress 2018, Copenhagen, Denmark.

    Research output: Contribution to conferencePosterResearch

  8. Published

    Single-cell genomics reveals a diverse metabolic potential of uncultivated Desulfatiglans-related Deltaproteobacteria widely distributed in marine sediment. / Jochum, Lara; Schreiber, Lars; Marshall, Ian; Jørgensen, Bo Barker; Schramm, Andreas; Kjeldsen, Kasper Urup.

    In: Frontiers in Microbiology, Vol. 9, 2038, 03.09.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  9. Published

    Metabolite profiling of social spiders along a climate gradient. / Sandfeld, Tobias; Wurster, Martina ; Malmos, Kirsten; Bechsgaard, Jesper Smærup; Lalk, Michael; Vosegaard, Thomas; Bilde, Trine; Schramm, Andreas.

    2018. Poster session presented at 17th International Symposium on Microbial Ecology, Leipzig, Germany.

    Research output: Contribution to conferencePosterResearch

  10. Published

    Gene expression of terminal oxidases in two marine bacterial strains exposed to nanomolar oxygen concentrations. / Gong, Xianzhe; Garcia-Robledo, Emilio; Lund, Marie Braad; Lehner, Philipp; Borisov, Sergey M.; Klimant, Ingo; Revsbech, Niels Peter; Schramm, Andreas.

    In: FEMS Microbiology Ecology, Vol. 94, No. 7, 072, 07.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  11. Published

    Genomic insights into the Agromyces-like symbiont of earthworms and its distribution among host species. / Lund, Marie B.; Mogensen, Mathias F.; Marshall, Ian P. G.; Albertsen, Mads; Viana, Flavia; Schramm, Andreas.

    In: FEMS Microbiology Ecology, Vol. 94, No. 6, 068, 06.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  12. Published

    Long-distance electron transport in individual, living cable bacteria. / Bjerg, Jesper T.; Boschker, Henricus T. S.; Larsen, Steffen; Berry, David; Schmid, Markus; Millo, Diego; Tataru, Paula; Meysman, Filip J. R.; Wagner, Michael; Nielsen, Lars Peter; Schramm, Andreas.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 115, No. 22, 29.05.2018, p. 5786-5791.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  13. Published

    Dextran sulfate sodium-induced colitis in piglets. / Nielsen, Katrine Dalby; Schramm, Andreas; Purup, Stig; Lauridsen, Charlotte; Canibe, Nuria.

    2018. 77-77 Poster session presented at 1st International Conference on Microbial Food and Feed Ingredients, Copenhagen, Denmark.

    Research output: Contribution to conferencePosterResearch

  14. Published

    Male spiders control offspring sex ratio through greater production of female-determining sperm. / Vanthournout, Bram; Busck, Mette Marie; Bechsgaard, Jesper; Hendrickx, Frederik; Schramm, Andreas; Bilde, Trine.

    In: Proceedings of the Royal Society B: Biological Sciences, Vol. 285, No. 1875, 20172887, 28.03.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  15. Published

    Distinct effects of the nephridial symbionts Verminephrobacter and Candidatus Nephrothrix on reproduction and maturation of its earthworm host Eisenia andrei. / Viana, Flavia; Paz, Laura-Carlota; Methling, Karen; Damgaard, Christian F.; Lalk, Michael; Schramm, Andreas; Lund, Marie B.

    In: F E M S Microbiology Ecology, Vol. 94, No. 2, 178, 02.2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  16. Published

    Cable Bacteria Stimulate Sulfate Reduction in Freshwater Sediments. / Sandfeld, Tobias; Thøgersen, Nikolaj Bang; Marzocchi, Ugo; Petro, Caitlin; Schramm, Andreas; Risgaard-Petersen, Nils.

    2018. Poster session presented at 5th International Symposium on Microbial Sulfur Metabolism , Wien, Austria.

    Research output: Contribution to conferencePosterResearch

  17. Published

    Dissimilatory nitrate reduction in freshwater cable bacteria. / Marzocchi, Ugo; Dam, Ann-Sofie; Thorup, Casper; Schramm, Andreas; Risgaard-Petersen, Nils.

    2018. Abstract from European Nitrogen Cycling Meeting, Alicante, Spain.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  18. Published

    Intracellular nitrate in sediments of an oxygen-deficient marine basin is linked to pelagic diatoms. / Kamp, Anja; Petro, Caitlin; Røy, Hans; Nielsen, Susanne; Carvalho, Pedro N; Stief, Peter; Schramm, Andreas.

    In: FEMS Microbiology Ecology, Vol. 94, No. 8, fiy122, 2018.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  19. Published

    Transient bottom water oxygenation creates a niche for cable bacteria in long-term anoxic sediments of the Eastern Gotland Basin. / Marzocchi, Ugo; Bonaglia, Stefano; van de Velde, Sebastiaan; Hall, Per O. J.; Schramm, Andreas; Risgaard-Petersen, Nils; Meysman, Filip J. R.

    In: Environmental Microbiology, Vol. 20, No. 8, 2018, p. 3031-3041.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  20. 2017
  21. Published

    Depth Distribution and Assembly of Sulfate-Reducing Microbial Communities in Marine Sediments of Aarhus Bay. / Jochum, Lara M.; Chen, Xihan; Lever, Mark A.; Loy, Alexander; Jorgensen, Bo Barker; Schramm, Andreas; Kjeldsen, Kasper U.

    In: Applied and Environmental Microbiology, Vol. 83, No. 23, e01547-17, 12.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  22. Published

    Disguised as a sulfate reducer: Growth of the Deltaproteobacterium Desulfurivibrio alkaliphilus by Sulfide Oxidation with Nitrate. / Thorup, Casper; Schramm, Andreas; Findlay, Alyssa Jean Lehsau; Finster, Kai; Schreiber, Lars.

    In: mBio (Online), Vol. 8, No. 4, e00671-17, 18.07.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  23. Published

    Visualizing the dental biofilm matrix by means of fluorescence lectin-binding analysis. / Tawakoli, Pune Nina; Neu, Thomas R; Busck, Mette Marie; Kuhlicke, Ute; Schramm, Andreas; Attin, Thomas; Wiedemeyer, Daniel B; Schlafer, Sebastian.

    In: Journal of Oral Microbiology, Vol. 9, No. 1, 09.07.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  24. Published

    Biparental transmission of Verminephrobacter symbionts in the earthworm Aporrectodea tuberculata (Lumbricidae). / Paz, Laura Carlota; Schramm, Andreas; Lund, Marie Braad.

    In: FEMS Microbiology Ecology, Vol. 93, No. 5, fix025, 01.05.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  25. Published

    Microbial community assembly and evolution in subseafloor sediment. / Starnawski, Piotr; Bataillon, Thomas; Ettema, Thijs J G; Jochum, Lara M.; Schreiber, Lars; Chen, Xihan; Lever, Mark A.; Polz, Martin F.; Jørgensen, Bo B.; Schramm, Andreas; Kjeldsen, Kasper U.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 114, No. 11, 14.03.2017, p. 2940-2945.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  26. Published

    Microbial community diversity and composition varies with habitat characteristics and biofilm function in macrophyte-rich streams. / Levi, Peter S.; Starnawski, Piotr; Poulsen, Britta; Baattrup-Pedersen, Annette; Schramm, Andreas; Riis, Tenna.

    In: Oikos, Vol. 126, No. 3, 01.03.2017, p. 398-409.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  27. Published

    Asgard archaea illuminate the origin of eukaryotic cellular complexity. / Zaremba-Niedzwiedzka, Katarzyna; Caceres, Eva F; Saw, Jimmy H; Bäckström, Disa; Juzokaite, Lina; Vancaester, Emmelien; Seitz, Kiley W; Anantharaman, Karthik; Starnawski, Piotr; Kjeldsen, Kasper U; Stott, Matthew B; Nunoura, Takuro; Banfield, Jillian F; Schramm, Andreas; Baker, Brett J; Spang, Anja; Ettema, Thijs J G.

    In: Nature, Vol. 541, No. 7637, 19.01.2017, p. 353-358.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  28. Published

    High quality draft genome sequence of Janthinobacterium psychrotolerans sp. nov., isolated from a frozen freshwater pond. / Gong, Xianzhe; Skrivergaard, Stig; Korsgaard, Benjamin; Schreiber, Lars; Marshall, Ian; Finster, Kai; Schramm, Andreas.

    In: Standards in Genomic Sciences, Vol. 12, No. 8, 19.01.2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  29. Published

    Mitigating N2O emissions from clover residues by 3,4-dimethylpyrazole phosphate (DMPP) without adverse effects on the earthworm Lumbricus terrestris. / Kong, Xianwang; Duan, YunFeng; Schramm, Andreas; Eriksen, Jørgen; Holmstrup, Martin; Larsen, Thomas; Bol, Roland; Petersen, Søren O.

    In: Soil Biology & Biochemistry, Vol. 104, 01.01.2017, p. 95-107.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  30. Published

    Colitis and microbiota - a study on weaned piglets with dextran sodium sulfate-induced colitis. / Nielsen, Katrine Dalby; Schramm, Andreas; Purup, Stig; Lauridsen, Charlotte; Canibe, Nuria.

    2017. 1 Poster session presented at Danish Microbiological Society (DMS) congress 2017, Copenhagen, Denmark.

    Research output: Contribution to conferencePosterResearch

  31. Published

    Microbial N Transformations and N2O Emission after Simulated Grassland Cultivation: Effects of the Nitrification Inhibitor 3,4-Dimethylpyrazole Phosphate (DMPP). / Duan, Yun-Feng (Kevin); Kong, Xianwang; Schramm, Andreas; Labouriau, Rodrigo; Eriksen, Jørgen; Petersen, Søren O.

    In: Applied and Environmental Microbiology, Vol. 83, No. 1, e02019-16, 2017.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  32. Published

    Microbial community assembly in marine sediments. / Petro, Caitlin; Starnawski, Piotr; Schramm, Andreas; Kjeldsen, Kasper U.

    In: Aquatic Microbial Ecology, Vol. 79, No. 3, 2017, p. 177-195.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  33. Published

    The novel bacterial phylum Calditrichaeota is diverse, widespread and abundant in marine sediments and has the capacity to degrade detrital proteins. / Marshall, Ian P G; Starnawski, Piotr; Cupit, Carina; Cáceres, Eva Fernández; Ettema, Thijs J G; Schramm, Andreas; Kjeldsen, Kasper U.

    In: Environmental Microbiology Reports, Vol. 9, No. 4, 2017, p. 397-403.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  34. 2016
  35. Published

    Endozoicomonas are specific, facultative symbionts of sea squirts. / Schreiber, Lars; Kjeldsen, Kasper Urup; Funch, Peter; Jensen, Jeppe; Obst, Matthias; López-Legentil, Susanna; Schramm, Andreas.

    In: Frontiers in Microbiology, Vol. 7, 12.07.2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  36. Published

    A taxonomic framework for cable bacteria and proposal of the candidate genera Electrothrix and Electronema. / Trojan, Daniela; Schreiber, Lars; Bjerg, Jesper Tataru; Bøggild, Andreas; Yang, Tingting; Kjeldsen, Kasper Urup; Schramm, Andreas.

    In: Systematic and Applied Microbiology, Vol. 39, No. 5, 07.2016, p. 297-306.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  37. Published

    Description of Endozoicomonas ascidiicola sp. nov., isolated from Scandinavian ascidians. / Schreiber, Lars; Kjeldsen, Kasper Urup; Obst, Matthias; Funch, Peter; Schramm, Andreas.

    In: Systematic and Applied Microbiology, Vol. 39, No. 5, 07.2016, p. 313-318.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  38. Published

    Single-Cell Genome and Group-Specific dsrAB Sequencing Implicate Marine Members of the Class Dehalococcoidia (Phylum Chloroflexi) in Sulfur Cycling. / Wasmund, Kenneth; Cooper, Myriel; Schreiber, Lars; Lloyd, Karen G.; Baker, Brett J.; Petersen, Dorthe Groth; Jørgensen, Bo Barker; Stepanauskas, Ramunas; Reinhardt, Richard; Schramm, Andreas; Loy, Alexander; Adrian, Lorenz.

    In: mBio (Online), Vol. 7, No. 3, e00266-16, 03.05.2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  39. Published

    A novel extracellular gut symbiont in the marine worm Priapulus caudatus (Priapulida) reveals an alphaproteobacterial symbiont clade of the Ecdysozoa. / Kroer, Paul; Kjeldsen, Kasper Urup; Nyengaard, Jens Randel; Schramm, Andreas; Funch, Peter.

    In: Frontiers in Microbiology, Vol. 7, 539, 26.04.2016.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  40. Published

    3,4-Dimethylpyrazole phosphate (DMPP) reduces activity of ammonia oxidizers without adverse effects on non-target soil microorganisms and functions. / Kong, Xianwang; Duan, Yun-Feng (Kevin); Schramm, Andreas; Eriksen, Jørgen; Petersen, Søren O.

    In: Applied Soil Ecology, Vol. 105, 15.04.2016, p. 67-75.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  41. Published

    Motility of electric cable bacteria. / Bjerg, Jesper Tataru; Damgaard, Lars Riis; Holm, Simon Agner; Schramm, Andreas; Nielsen, Lars Peter.

    In: Applied and Environmental Microbiology, Vol. 82, No. 13, 15.04.2016, p. 3816-3821.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  42. Published

    Respiratory Kinetics of Marine Bacteria Exposed to Decreasing Oxygen Concentrations. / Gong, Xianzhe; Garcia-Robledo, Emilio; Schramm, Andreas; Revsbech, Niels Peter.

    In: Applied and Environmental Microbiology, Vol. 82, No. 5, 03.2016, p. 1412-22.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  43. Published

    Direct nitrous oxide emission from the aquacultured Pacific white shrimp (Litopenaeus vannamei). / Heisterkamp, Ines M.; Schramm, Andreas; de Beer, Dirk; Stief, Peter.

    In: Applied and Environmental Microbiology, Vol. 82, No. 13, 2016, p. 4028-4034.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  44. Published

    Earthworm ecology affects the population structure of their Verminephrobacter symbionts. / Macedo Viana, Flavia Daniela; Jensen, Christopher Erik; Macey, Michael; Schramm, Andreas; Lund, Marie Braad.

    In: Systematic and Applied Microbiology, Vol. 39, No. 3, 2016, p. 170-172.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  45. 2015
  46. Published

    A new α-proteobacterium in the penis worm reveals clade of gut symbionts of the Ecdysozoa. / Kroer, Paul; Schramm, Andreas; Kjeldsen, Kasper Urup; Funch, Peter.

    2015. Abstract from IV International Workshop on Scalidophora, Ferrol, Galicia, Spain.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  47. Published

    Cable bacteria associated with long-distance electron transport in New England salt marsh sediment. / Larsen, Steffen; Nielsen, Lars Peter; Schramm, Andreas.

    In: Environmental Microbiology Reports, Vol. 7, No. 2, 04.2015, p. 175-179.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  48. Published

    Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen. / Nielsen, Maja; Schreiber, Lars; Finster, Kai; Schramm, Andreas.

    In: Standards in Genomic Sciences, Vol. 9, No. 1, 23, 21.01.2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  49. Published

    Ammonia-oxidizing Bacteria of the Nitrosospira Cluster 1 Dominate over Ammonia-oxidizing Archaea in Oligotrophic Surface Sediments near the South Atlantic Gyre. / Lagostina, Lorenzo; Goldhammer, Tobias; Røy, Hans; Evans, Thomas W; Lever, Mark; Jørgensen, Bo B; Petersen, Dorthe G; Schramm, Andreas; Schreiber, Lars.

    In: Environmental Microbiology Reports, Vol. 7, No. 3, 08.01.2015, p. 404-413.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  50. Published

    Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen. / Nielsen, Maja; Schreiber, Lars; Finster, Kai; Schramm, Andreas.

    In: Standards in Genomic Sciences, Vol. 10, No. 4, 01.01.2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  51. Published

    Cable Bacteria in Freshwater Sediments. / Risgaard-Petersen, Nils; Kristiansen, Michael; Frederiksen, Rasmus ; Lindequist Dittmer, Anders ; Bjerg, Jesper Jensen; Trojan, Daniela; Schreiber, Lars; Damgaard, Lars Riis; Schramm, Andreas; Nielsen, Lars Peter.

    In: Applied and Environmental Microbiology, Vol. 81, No. 17, 2015, p. 6003-6011.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  52. Published

    Erratum to 'Draft genome sequence of Bacillus azotoformans MEV2011, a (Co-) denitrifying strain unable to grow with oxygen'. / Nielsen, Maja; Schreiber, Lars; Finster, Kai; Schramm, Andreas.

    In: Standards in Genomic Sciences, Vol. 10, No. 72, 2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperComment/debateResearch

  53. Published

    Evolution of the tripartite symbiosis between earthworms, Verminephrobacter and Flexibacter-like bacteria. / Kristensen, Peter Møller; Lund, Marie B.; Schramm, Andreas.

    In: Frontiers in Microbiology, Vol. 6, 529, 2015.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  54. 2014
  55. Published

    A tunicate-specific Endozoicomonas-lineage, and comparative genomicsand physiology of the symbiotic Endozoicomonas clade. / Schreiber, Lars; Kjeldsen, Kasper Urup; Tegetmeyer, Halina; Funch, Peter; López-Legentil, Susanna; Dubilier, Nicole; Schramm, Andreas.

    2014. Poster session presented at 15th International Symposium on Microbial Ecology, Seoul, Korea, Republic of.

    Research output: Contribution to conferencePosterResearch

  56. Published

    The cable genome: first insights into the metabolic potential of electron-conducting filamentous Desulfobulbaceae from single filament genome sequencing. / Schreiber, Lars; Kjeldsen, Kasper Urup; Bjerg, Jesper Jensen; Bøggild, Andreas; van de Vossenberg, Jack; Nielsen, Lars Peter; Schramm, Andreas.

    2014. Abstract from 15th International Symposium on Microbial Ecology, Seoul, Korea, Republic of.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  57. Published

    Chironomus plumosus larvae increase fluxes of denitrification products and diversity of nitrate-reducing bacteria in freshwater sediment. / Poulsen, Morten; W. V. Kofoed, Michael; H. Larsen, Lone; Schramm, Andreas; Stief, Peter.

    In: Systematic and Applied Microbiology, Vol. 37, No. 1, 02.2014, p. 51-59.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  58. Published

    Succession of cable bacteria and electric currents in marine sediment. / Schauer, Regina; Risgaard-Petersen, Nils; Kjeldsen, Kasper Urup; Bjerg, Jesper Jensen; Jørgensen, Bo Barker; Schramm, Andreas; Nielsen, Lars Peter.

    In: I S M E Journal, Vol. 8, 23.01.2014, p. 1314-1322.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  59. Published

    Electric coupling between distant nitrate reduction and sulfide oxidation in marine sediment. / Marzocchi, Ugo; Trojan, Daniela; Larsen, Steffen; Meyer, Rikke Louise; Revsbech, Niels Peter; Schramm, Andreas; Nielsen, Lars Peter; Risgaard-Petersen, Nils.

    In: I S M E Journal, Vol. 8, No. 8, 2014, p. 1682-1690.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  60. Published

    Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi. / Wasmund, K; Schreiber, Lars; Lloyd, Karen; Petersen, Dorthe Groth; Schramm, Andreas; Stepanauskas, R; Jørgensen, Bo Barker; Adrian, L.

    In: I S M E Journal, Vol. 8, 2014, p. 383-397.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  61. Published

    The earthworm-Verminephrobacter symbiosis : an emerging experimental system to study extracellular symbiosis. / Lund, Marie Braad; Kjeldsen, Kasper U; Schramm, Andreas.

    In: Frontiers in Microbiology, Vol. 5, 128, 2014.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperReviewResearchpeer-review

  62. 2013
  63. Published

    Extracellular DNA in adhesion and biofilm formation of four environmental isolates : A quantitative study. / Tang, L.; Schramm, Andreas; Neu, T.R.; Revsbech, N.P.; Meyer, R.L.

    In: F E M S Microbiology Ecology, Vol. 86, No. 3, 01.12.2013, p. 394-403.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  64. Published

    How do natural, uncultivated microbes interact with organic matter? Insights from single cell genomics and metagenomics. / Lloyd, Karen; Bird, Jordan; Schreiber, Lars; Petersen, Dorthe Groth; Kjeldsen, Kasper Urup; Schramm, Andreas; Stepanauskas, Ramunas; Jørgensen, Bo Barker.

    2013. Abstract from 2013 AGU Fall Meeting, San Francisco, United States.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  65. Published

    Shell biofilm-associated nitrous oxide production in marine molluscs : Processes, precursors and relative importance. / Heisterkamp, I.M.; Schramm, Andreas; Larsen, Lone Heimann; Svenningsen, Nanna Bygvraa; Lavik, G.; De Beer, D.; Stief, Peter.

    In: Environmental Microbiology, Vol. 15, No. 7, 01.07.2013, p. 1943-1955.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  66. Published

    Predominant archaea in marine sediments degrade detrital proteins. / Lloyd, Karen; Schreiber, L.; Petersen, Dorthe Groth; Kjeldsen, K.U.; Lever, M.A.; Steen, A.D.; Stepanauskas, R.; Richter, M.; Kleindienst, S.; Lenk, S.; Schramm, Andreas; Jorgensen, B.B.

    In: Nature, Vol. 496, No. 7444, 11.04.2013, p. 215-218.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  67. Published

    Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen. / Poulsen, Morten; Schwab, Clarissa; Jensen, Bent Borg; Engberg, Ricarda M; Spang, Anja; Canibe, Nuria; Højberg, Ole; Milinovich, Gabriel; Franger, Lena; Schleper, Christa; Weckwerth, Wolfram; Lund, Peter; Schramm, Andreas; Urich, Tim.

    In: Nature Communications, Vol. 4, 05.02.2013, p. 1-7.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  68. Published

    Seasonal methane oxidation potential in manure crusts. / Nielsen, Daniel Aagren; Schramm, Andreas; Nielsen, Lars Peter; Revsbech, Niels Peter.

    In: Applied and Environmental Microbiology, Vol. 79, No. 1, 01.01.2013, p. 407-410.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  69. Published

    Long distance electron transport in marine sediments: Microbial and geochemical implications. / Risgaard-Petersen, Nils; Larsen, Steffen; Pfeffer, Christian; Meyer, Rikke Louise; Schramm, Andreas; Dong, Mingdong; Song, Jie; Revil, Andre; Meister, Patric; Nielsen, Lars Peter.

    2013. Abstract from Isme14, Copenhagen, Denmark.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  70. 2012
  71. Published

    Fluorescence in situ hybridization (FISH) detection of nitrite reductase transcripts (nirS mRNA) in Pseudomonas stutzeri biofilms relative to a microscale oxygen gradient. / Kofoed, M.V.W.; Nielsen, D.A.; Revsbech, N.P.; Schramm, Andreas.

    In: Systematic and Applied Microbiology, Vol. 35, No. 8, 01.12.2012, p. 513-517.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  72. Published

    Filamentous bacteria transport electrons over centimetre distances. / Pfeffer, Christian; Larsen, Steffen; Song, Jie; Dong, Mingdong; Besenbacher, Flemming; Meyer, Rikke Louise; Kjeldsen, Kasper Urup; Schreiber, Lars; Gorby, Yuri A.; El-Naggar, Mohamed Y.; Leung, Kar Man; Schramm, Andreas; Risgaard-Petersen, Nils; Nielsen, Lars Peter.

    In: Nature, Vol. 491, 08.11.2012, p. 218-221.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  73. Published

    Higher nitrate-reducer diversity in macrophyte-colonized compared to unvegetated freshwater sediment. / Kofoed, Michael; Stief, Peter; Hauzmayer, S.; Schramm, Andreas; Herrmann, Martina.

    In: Systematic and Applied Microbiology, Vol. 35, No. 7, 01.10.2012, p. 465-472.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  74. Published

    Shell biofilm nitrification and gut denitrification contribute to emission of nitrous oxide by the invasive freshwater mussel Dreissena polymorpha (Zebra mussel). / Svenningsen, Nanna Bygvraa; Heisterkamp, I.M.; Sigby-Clausen, Maria; Larsen, Lone Heimann; Nielsen, L.P.; Stief, P.; Schramm, Andreas.

    In: Applied and Environmental Microbiology, Vol. 78, No. 12, 01.06.2012, p. 4505-4509.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  75. Published

    Verminephrobacter aporrectodeae sp. nov. subsp. tuberculatae and subsp. caliginosae; the specific nephridial symbionts of the earthworms Aporrectodea tuberculata and A. caliginosa. / Lund, Marie Braad; Schätzle, Sarah; Schramm, Andreas; Kjeldsen, Kasper Urup.

    In: Antonie van Leeuwenhoek: Journal of Microbiology, Vol. 101, No. 3, 03.2012.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  76. Published

    A single cell approach for revealing the phylogenetic identity of unknown sulfate-reducing microbes in a marine sediment. / Petersen, Dorthe Groth; Lloyd, Karen; Schreiber, Lars; Kjeldsen, Kasper Urup; Jørgensen, Bo Barker; Schramm, Andreas.

    2012. Abstract from 14th International Symposium on Microbial Ecology, Copenhagen, Denmark.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  77. Published

    Distribution of ammonia oxidizing archaea and bacteria along an ammonia gradient in oceanic sediment. / Lagostina, Lorenzo; Schreiber, Lars; Lever, Mark; Evans, Thomas ; Goldhammer, Tobias; Schramm, Andreas; Petersen, Dorthe Groth.

    2012. Abstract from 14th International Symposium on Microbial Ecology, Copenhagen, Denmark.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  78. Published

    Insights into the ecological distributions and genomes of the enigmatic and widely distributed marine subsurface "Dehalococcoidetes" (phylum Chloroflexi). / Wasmund, Kenneth; Algora, Camelia; Cooper, Myriel; Schreiber, Lars; Lloyd, Karen; Petersen, Dorthe Groth; Reinhardt, Richard; Jørgensen, Bo Barker; Schramm, Andreas; Adrian, Lorenz.

    2012. Abstract from 14th International Symposium on Microbial Ecology, Copenhagen, Denmark.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  79. Published

    Pinning down a metabolism for widespread, abundant, uncultured archaea through single cell genomic analysis. / Lloyd, Karen; Schreiber, Lars; Petersen, Dorthe Groth; Richter, Michael; Kjeldsen, Kasper Urup; Lever, Mark; Kleindienst, Sara; Schramm, Andreas; Jørgensen, Bo Barker.

    2012. Abstract from 14th International Symposium on Microbial Ecology, Copenhagen, Denmark.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  80. Published

    Potential environmental functions of widespread, abundant, uncultured marine archaea. / Lloyd, Karen; Schreiber, Lars; Petersen, Dorthe Groth; Schramm, Andreas; Jørgensen, Bo Barker.

    2012.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  81. Published

    Probing the genomic content of low-energy specialists. / Lloyd, Karen; Schreiber, Lars; Petersen, Dorthe Groth; Richter, Michael; Kjeldsen, Kasper Urup; Lever, Mark; Lenk, Sabine; Kleindienst, Sara; Schramm, Andreas; Jørgensen, Bo Barker.

    2012. Abstract from MICROENERGY 2012 2nd International Workshop on Microbial Life under Extreme Energy Limitation, Aarhus , Denmark.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  82. Published

    Purifying selection and molecular adaptation in the genome of Verminephrobacter, the heritable symbiotic bacteria of earthworms. / Kjeldsen, Kasper U; Bataillon, Thomas; Pinel, Nicolás; De Mita, Stéphane; Lund, Marie B; Panitz, Frank; Bendixen, Christian; Stahl, David A; Schramm, Andreas.

    In: Genome Biology and Evolution, Vol. 4, No. 3, 2012, p. 307-315.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  83. Published

    Reconstructing genomes of uncultured microorganisms from marine sediments using single cell genomics - an Aarhus Bay, Denmark, case study. / Schreiber, Lars; Lloyd, Karen; Petersen, Dorthe Groth; Richter, Michael; Kjeldsen, Kasper Urup; Lever, Mark; Lenk, Sabine; Kleindienst, Sara ; Jørgensen, Bo Barker; Schramm, Andreas.

    2012. Abstract from 14th International Symposium on Microbial Ecology, Copenhagen, Denmark.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  84. Published

    Single cell genomics of uncultured subsurface archaea. / Lloyd, Karen; Schreiber, Lars; Petersen, Dorthe Groth; Richter, Michael; Kjeldsen, Kasper Urup; Lever, Mark; Kleindienst, Sara ; Schramm, Andreas; Jørgensen, Bo Barker.

    2012. Abstract from Goldschmidt, Montreal, Canada.

    Research output: Contribution to conferenceConference abstract for conferenceResearchpeer-review

  85. Published

    Succession of Deferribacteres and Epsilonproteobacteria through a nitrate-treated high-temperature oil production facility. / Gittel, Antje; Kofoed, Michael; Sørensen, Ketil B; Ingvorsen, Kjeld; Schramm, Andreas.

    In: Systematic and Applied Microbiology, Vol. 35, 2012, p. 165-174.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  86. Published

    Sulfide oxidation in a biofilter. / Pedersen, Claus Lunde; Liu, Dezhao; Hansen, Michael Jørgen; Feilberg, Anders; Jensen, Louise Helene Søgaard; Bonne Guldberg, Lise; Schramm, Andreas; Nielsen, Lars Peter.

    2012.

    Research output: Contribution to conferencePosterResearch

  87. 2011
  88. Published

    Extracellular DNA formation during biofilm development by freshwater bacteria. / Tang, Lone; Schramm, Andreas; Revsbech, Niels Peter; Neu, Thomas ; Meyer, Rikke Louise.

    2011.

    Research output: Contribution to conferencePosterResearch

  89. Published

    Process optimization by decoupled control of key microbial populations: distribution of activity and abundance of polyphosphate-accumulating organisms and nitrifying populations in a full-scale IFAS-EBPR plant. / Onnis-Hayden, Annalisa; Majed, Nehreen; Schramm, Andreas; Gu, April Z.

    In: Water Research, Vol. 45, 05.2011, p. 3845-3854.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  90. Published

    Bacterial community structure of a full-scale biofilter treating pig house exhaust air. / Kristiansen, Anja; Pedersen, Kristina Hadulla; Nielsen, Per Halkjær; Nielsen, Lars Peter; Nielsen, Jeppe Lund; Schramm, Andreas.

    In: Systematic and Applied Microbiology, Vol. 34, 2011, p. 344-352.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  91. Published

    Biofilm retention on surfaces with variable roughness and hydrophobicity. / Tang, Lone; Pillai, Saju; Revsbech, Niels Peter; Schramm, Andreas; Bischoff, Claus; Meyer, Rikke Louise.

    In: Biofouling, Vol. 27, No. 1, 2011, p. 111-121.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  92. Published

    Defluviimonas denitrificans gen. nov., sp. nov., and Pararhodobacter aggregans gen. nov., sp. nov., non-phototrophic Rhodobacteraceae from the biofilter of a marine aquaculture. / Foesel, Bärbel U.; Drake, Harold L.; Schramm, Andreas.

    In: Systematic and Applied Microbiology, Vol. 34, 2011, p. 498-502.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  93. Published

    Dynamic microbial response of sulfidogenic wastewater biofilm to nitrate. / Mohanakrishnan, Janani; Kofoed, Michael; Barr, Jeremy; Yuan, Zhiguo; Schramm, Andreas; Meyer, Rikke Louise.

    In: Applied Microbiology and Biotechnology, Vol. 91, 2011, p. 1647.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  94. 2010
  95. Published

    Regulation of ammonia oxidation in biotrickling air filters. / Ottosen, Lars D.M.; Juhler, Susanne; Guldberg, Lise Bonne; Nielsen, Lars Peter; Schramm, Andreas; Revsbech, Niels Peter.

    Proceedings of the 3rd International Congress on Biotechniques for Air Pollution Control. 2010. p. 111-112.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearchpeer-review

  96. Published

    Latitudinal patterns in the abundance of major marine bacterioplankton groups. / Wietz, Matthias; Gram, Lone; Jørgensen, Bo; Schramm, Andreas.

    In: Aquatic Microbial Ecology, Vol. 61, 20.10.2010, p. 179-189.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  97. Published

    In vitro production of necrotic enteritis toxin B, NetB, by netB-positive and netB-negative Clostridium perfringens originating from healthy and diseased broiler chickens. / Abildgaard, Lone; Søndergaard, Teis; Engberg, Ricarda M; Schramm, Andreas; Højberg, Ole.

    Proceedings of the 22nd International ICFMH Symposium . 2010. p. 148-148.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  98. Published

    In vitro production of necrotic enteritis toxin B, NetB, by netB-positive and netB-negative Clostridium perfringens orginating from healthy and diseased broiler chickens. / Abildgaard, Lone; Søndergaard, Teis; Engberg, Ricarda M; Schramm, Andreas; Højberg, Ole.

    Proceedings of the Rowett-INRA 7th joint Symposium - Gut Microbiology: New insights into gut microbial ecosystems. 2010. p. 129-129.

    Research output: Contribution to book/anthology/report/proceedingConference abstract in proceedingsResearch

  99. Published

    Ammonia Removal Limited by Inhibition of Metabolism and Growth. / Ottosen, Lars Ditlev Mørck; Juhler, Susanne; Schramm, Andreas; Revsbech, Niels Peter; Feilberg, Anders; Guldberg, Lise; Nielsen, Lars Peter.

    2010. Abstract from ISME 13 - 13th International Symposium on Microbial Ecology, Seattle, WA, United States.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  100. Published

    Beneficial effect of Verminephrobacter nephridial symbionts on the fitness of the earthworm Aporrectodea tuberculata. / Lund, Marie Braad; Holmstrup, Martin; Lomstein, Bente Aagaard; Damgaard, Christian; Schramm, Andreas.

    In: Applied and Environmental Microbiology, Vol. 76, 2010, p. 4738-4743.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  101. Published

    Control of nitrous oxide emission from Chironomus plumosus larvae by nitrate and temperatur. / Stief, Peter; Polerecky, Lubos; Poulsen, Morten; Schramm, Andreas.

    In: Limnology and Oceanography, Vol. 55, No. 2, 2010, p. 872-884.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  102. Published

    Detection of denitrification genes by in situ rolling circle amplification - fluorescence in situ hybridization (in situ RCA-FISH) to link metabolic potential with identity inside bacterial cells. / Hoshino, Tatsuhiko; Schramm, Andreas.

    In: Environmental Microbiology, Vol. 12, 2010, p. 2508–2517.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  103. Published

    Diversity and host specificity of the Verminephrobacter–earthworm symbiosis. / Lund, Marie Braad; Davidson, Seana; Holmstrup, Martin; James, Sam; Kjeldsen, Kasper Urup; Stahl, David; Schramm, Andreas.

    In: Environmental Microbiology, Vol. 12, 2010, p. 2142–2151.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  104. Published

    Effect of nitrate on sulfur transformations in sulfidogenic sludge of a marine aquaculture biofilter. / Schwermer, Carsten Ulrich; Ferdelman, Timothy G.; Stief, Peter; Gieseke, Armin; Rezakhani, Nastaran; van Rijn, Jaap; de Beer, Dirk; Schramm, Andreas.

    In: F E M S Microbiology Ecology, Vol. 72, No. 3, 2010, p. 476–484.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  105. Published

    In vitro production of necrotic enteritis toxin B, NetB, by netB-positive and netB-negative Clostridium perfringens originating from healthy and diseased broiler chickens. / Abildgaard, Lone; Søndergaard, Teis; Engberg, Ricarda M; Schramm, Andreas; Højberg, Ole.

    In: Veterinary Microbiology, Vol. 144, No. 1-2, 2010, p. 231-235.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  106. Published

    Nitrous oxide production associated with coastal marine invertebrates. / Heisterkamp, Ines Maria; Schramm, Andreas; de Beer, Dirk; Stief, Peter.

    In: Marine Ecology - Progress Series, Vol. 415, 2010, p. 1-9.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  107. Published

    Oxygen Distribution and Potential Ammonia Oxidation in Floating, Liquid Manure Crusts. / Nielsen, Daniel Aagren; Nielsen, Lars Peter; Schramm, Andreas; Revsbech, Niels Peter.

    In: Journal of Environmental Quality, Vol. 39, 2010, p. 1813-1820.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  108. Published

    Regulation of nitrous oxide emission associated with benthic invertebrates. / Stief, Peter; Schramm, Andreas.

    In: Freshwater Biology, Vol. 55, 2010, p. 1647-1657.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

  109. Published

    Stimulation of potential nitrate reducers and their succession in a nitrate-treated high-temperature oil production facility. / Gittel, Antje; Kofoed, Michael; Sørensen, Ketil; Ingvorsen, Kjeld; Schramm, Andreas.

    2010. Poster session presented at 13th International Symposium on Microbial Ecology (ISME-13), Seattle, United States.

    Research output: Contribution to conferencePosterResearchpeer-review

  110. Published

    The effect of feeding a commercial essential oil product on Clostridium perfringens numbers in the intestine of broiler chickens measured by real-time PCR targeting the α-toxin-encoding gene (plc). / Abildgaard, Lone; Højberg, Ole; Schramm, Andreas; Balle, K.M.; Engberg, Ricarda M.

    In: Animal Feed Science and Technology, Vol. 157, No. 3-4, 2010, p. 181–189.

    Research output: Contribution to journal/Conference contribution in journal/Contribution to newspaperJournal articleResearchpeer-review

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