Leveraging Multiple Layers of Data To Predict Drosophila Complex Traits. / Morgante, Fabio; Huang, Wen; Sørensen, Peter; Maltecca, Christian; Mackay, Trudy F.C.
I: G3 (Bethesda, Md.), Bind 10, Nr. 12, 12.2020, s. 4599-4613.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Genomic diversity revealed by whole-genome sequencing in three Danish commercial pig breeds. / Cai, Zexi; Sarup, Pernille; Ostersen, Tage; Nielsen, Bjarne; Fredholm, Merete; Karlskov-Mortensen, Peter; Sørensen, Peter; Jensen, Just; Guldbrandtsen, Bernt; Lund, Mogens Sandø; Christensen, Ole Fredslund; Sahana, Goutam.
I: Journal of Animal Science, Bind 98, Nr. 7, skaa229, 07.2020.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
qgg : an R package for large-scale quantitative genetic analyses. / Rohde, Palle Duun; Fourie Sørensen, Izel; Sørensen, Peter.
I: Bioinformatics (Oxford, England), Bind 36, Nr. 8, 04.2020, s. 2614-2615.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Genetic Signatures of Drug Response Variability in Drosophila melanogaster. / Rohde, Palle Duun; Jensen, Iben Ravnborg; Sarup, Pernille Merete; Ørsted, Michael; Demontis, Ditte; Sørensen, Peter; Kristensen, Torsten Nygård.
I: Genetics (Print), Bind 213, Nr. 2, 08.10.2019, s. 633-650.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Strong impact of thermal environment on the quantitative genetic basis of a key stress tolerance trait. / Ørsted, Michael; Hoffmann, Ary Anthony; Rohde, Palle Duun; Sørensen, Peter; Kristensen, Torsten Nygård.
I: Heredity, Bind 122, Nr. 3, 03.2019, s. 315-325.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Impact of the rumen microbiome on milk fatty acid composition of Holstein cattle. / Buitenhuis, Bart; Lassen, Jan; Noel, Samantha Joan; Plichta, Damian R; Sørensen, Peter; Difford, Gareth F; Poulsen, Nina A.
I: Genetics Selection Evolution, Bind 51, Nr. 1, 23, 2019.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Understanding the potential bias of variance components estimators when using genomic models. / Cuyabano, Beatriz C.D.; Sørensen, A. Christian; Sørensen, Peter.
I: Genetics Selection Evolution, Bind 50, Nr. 1, 41, 06.08.2018.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
MicroRNA-guided prioritization of genome-wide association signals reveals the importance of microRNA-target gene networks for complex traits in cattle. / Fang, Lingzhao; Sørensen, Peter; Sahana, Goutam; Panitz, Frank; Su, Guosheng; Zhang, Shengli; Yu, Ying; Li, Bingjie; Ma, Li; Liu, George; Lund, Mogens Sandø; Thomsen, Bo.
I: Scientific Reports, Bind 8, 9345, 19.06.2018.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Genomic Feature Prediction Models - Improved Prediction Accuracy by Joint Marker Estimation. / Rohde, Palle Duun; Sørensen, Izel Fourie; Sørensen, Peter.
2018. Poster session præsenteret ved ESHG 2018: European Society of Human Genetics, Milano, Italien.Publikation: Konferencebidrag › Poster › Forskning
Functional validation of candidate genes detected by genomic feature models. / Rohde, Palle Duun; Østergaard, Solveig ; Kristensen, Torsten Nygaard; Sørensen, Peter; Loeschcke, Volker; F C Mackay, Trudy; Sarup, Pernille Merete.
I: G3: Genes, Genomes, Genetics (Bethesda), Bind 8, Nr. 5, 05.05.2018, s. 1659-1668.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Environmental variation partitioned into separate heritable components. / Ørsted, Michael; Rohde, Palle Duun; Hoffmann, Ary A; Sørensen, Peter; Kristensen, Torsten Nygård.
I: Evolution, Bind 72, Nr. 1, 01.2018, s. 136-152.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
H1 NMR metabolomic phenotypic prediction of growth in pigs. / Sarup, Pernille Merete; Jensen, Just; Ostersen, Tage; Christensen, Ole Fredslund; Sørensen, Peter.
2018. Abstract fra 69th Annual Meeting of the European Federation of Animal Science EAAP 2018, Dubrovnik, Kroatien.Publikation: Konferencebidrag › Konferenceabstrakt til konference › Formidling
Multiple Trait Covariance Association Test Identifies Gene Ontology Categories Associated with Chill Coma Recovery Time in Drosophila melanogaster /631/208/721 /631/208/721 /631/208/729/743 /631/208/729/743 /119 /45 /45/43 article. / Sørensen, Izel Fourie; Edwards, Stefan M.; Rohde, Palle Duun; Sørensen, Peter.
I: Scientific Reports, Bind 7, Nr. 1, 2413, 01.12.2017.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Use of biological priors enhances understanding of genetic architecture and genomic prediction of complex traits within and between dairy cattle breeds. / Fang, Lingzhao; Sahana, Goutam; Ma, Peipei; Su, Guosheng; Yu, Ying; Zhang, Shengli; Lund, Mogens Sandø; Sørensen, Peter.
I: B M C Genomics, Bind 18, 10.08.2017, s. 604.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Genomic Analysis of Genotype-by-Social Environment Interaction for Drosophila melanogaster Aggressive Behavior. / Rohde, Palle Duun; Gartner, Bryn; Ward, Kirsty; Sørensen, Peter; F C Mackay, Trudy.
I: Genetics (Print), Bind 206, Nr. 4, 07.07.2017, s. 1969-1984.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Whole blood optimization and genetic association of ex vivo TNF-alpha responsiveness to killed E-coli in Danish Holstein cows. / Khatun, M.; Jorgensen, H. B. H.; Ehsani, A.; Lund, M. S.; Sahana, G.; Sorensen, P.; Rontved, C. M.
I: Livestock Science, Bind 201, 07.2017, s. 92-98.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Improved prediction of genetic predisposition to psychiatric disorders using genomic feature best linear unbiased prediction models. / Rohde, Palle Duun; Demontis, Ditte; Børglum, Anders; iPSYCH-Broad Consortium ; Sørensen, Peter.
2017. Poster session præsenteret ved ESHG 2017: European Society of Human Genetics Annual Meeting, Copenhagen, Danmark.Publikation: Konferencebidrag › Poster › Forskning
Exploring the genetic architecture and improving genomic prediction accuracy for mastitis and milk production traits in dairy cattle by mapping variants to hepatic transcriptomic regions responsive to intra-mammary infection. / Fang, Lingzhao; Sahana, Goutam; Ma, Peipei; Su, Guosheng; Yu, Ying; Zhang, Shengli; Lund, Mogens Sandø; Sørensen, Peter.
I: Genetics Selection Evolution, Bind 49, 44, 12.05.2017.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Integrating Sequence-based GWAS and RNA-Seq Provides Novel Insights into the Genetic Basis of Mastitis and Milk Production in Dairy Cattle. / Fang, Lingzhao; Sahana, Goutam; Su, Guosheng; Yu, Ying; Zhang, Shengli; Lund, Mogens Sandø; Sørensen, Peter.
I: Scientific Reports, Bind 7, 45560, 30.03.2017.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Covariance Association Test (CVAT) Identifies Genetic Markers Associated with Schizophrenia in Functionally Associated Biological Processes. / Rohde, Palle Duun; Demontis, Ditte; Castro Dias Cuyabano, Beatriz; Børglum, Anders; Sørensen, Peter.
2016. Poster session præsenteret ved 2nd Annual Danish Bioinformatics Conference, Odense, Danmark.Publikation: Konferencebidrag › Poster › Forskning › peer review
Covariance Association Test (CVAT) Identifies Genetic Markers Associated with Schizophrenia in Functionally Associated Biological Processes. / Rohde, Palle Duun; Demontis, Ditte; Castro Dias Cuyabano, Beatriz; Børglum, Anders; Sørensen, Peter.
I: Genetics (Print), Bind 203, Nr. 4, 01.08.2016, s. 1901-1913.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Genomic prediction for quantitative traits is improved by mapping variants to gene ontology categories in Drosophila melanogaster. / Edwards, Stefan M.; Sørensen, Izel F.; Sarup, Pernille; Mackay, Trudy F C; Sørensen, Peter.
I: Genetics, Bind 203, Nr. 4, 01.08.2016, s. 1871-1883.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
ICQG 5 on Madison's Isthmus links genomics and statistics of complex traits. / Simianer, Henner; Sørensen, Peter.
I: Journal of Animal Breeding and Genetics (Online), Bind 133, Nr. 4, 08.2016, s. 249-250.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Leder › peer review
Covariance Association Test (CVAT) Identifies Genetic Markers Associated with Schizophrenia in Functionally Associated Biological Processes. / Rohde, Palle Duun; Demontis, Ditte; Castro Dias Cuyabano, Beatriz; Børglum, Anders; Sørensen, Peter.
2016. Poster session præsenteret ved 5th International Conference on Quantitative Genetics , Madison, USA.Publikation: Konferencebidrag › Poster › Forskning › peer review
The impact of intramammary Escherichia coli challenge on liver and mammary transcriptome and cross-talk in dairy cows during early lactation using RNAseq. / Moyes, K. M.; Sørensen, P.; Bionaz, M.
I: P L o S One, Bind 11, Nr. 6, e0157480, 01.06.2016.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
A Quantitative Genomic Approach for Analysis of Fitness and Stress Related Traits in a Drosophila melanogaster Model Population. / Rohde, Palle Duun; Krag, Kristian; Loeschcke, Volker; Overgaard, Johannes; Sørensen, Peter; Kristensen, Torsten Nygård.
I: International Journal of Genomics, 04.2016, s. 1-11.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Increased prediction accuracy using a genomic feature model including prior information on quantitative trait locus regions in purebred Danish Duroc pigs. / Sarup, Pernille Merete; Jensen, Just; Ostersen, Tage; Henryon, Mark; Sørensen, Peter.
I: BMC Genetics, Bind 17, Nr. 11, 05.01.2016.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Decomposing genomic variances in a mouse F2 population using information from GWA, GWE and eQTL analyses. / Ehsani, Alireza; Janss, Luc; Pomp, Daniel; Sørensen, Peter.
I: Animal Genetics, Bind 47, Nr. 2, 2016, s. 165-173.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
ECO-FCE : Integrative genomic models for FCE in monogastries. / Sarup, Pernille Merete; Jensen, Just; Shirali, Mahmoud; Ostersen, Tage; H, Reyer ; Varley, P; Sørensen, Peter.
Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production. Wageningen Academic Publishers, 2016. (Book of Abstracts of the Annual EAAP Meeting, Bind 22).Publikation: Bidrag til bog/antologi/rapport/proceeding › Konferenceabstrakt i proceedings › Forskning › peer review
Genome-wide transcriptional and post-transcriptional regulation of innate immune and defense responses of bovine mammary gland to Staphylococcus aureus. / Fang, Lingzhao; Hou, Yali; An, Jing; Li, Bingjie; Song, Minyan; Wang, Xiao; Sørensen, Peter; Dong, Yichun; Liu, Chao; Wang, Yachun; Zhu, Huabin; Zhang, Shengli; Yu, Ying.
I: Frontiers in cellular and infection microbiology, Bind 6, 193, 2016.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Increased prediction accuracy using a genomic feature model including information on QTLs. / Sarup, Pernille Merete; Jensen, Just; Ostersen, T; Henryon, Mark; Sørensen, Peter.
Book of Abstracts of the 67th Annual Meeting of the European Association for Animal Production. Wageningen Academic Publishers, 2016. (Book of Abstracts of the Annual EAAP Meeting, Bind 22).Publikation: Bidrag til bog/antologi/rapport/proceeding › Konferenceabstrakt i proceedings › Forskning › peer review
Adaptation of dairy cattle and goat breeds to organic and low input production systems : Delivrable 2.5 Official deliverable of the 7th Framework Programme KBBE. / Arsenos, A.; Ferris, C; Moorby, J.M.; Rinne, M.; Sairanen, A; Shingfield, K; Sørensen, Peter; Steinwidder, A.; Vestergaard, Mogens; Zollitsch, W.
2015. 135 s.Publikation: Bog/antologi/afhandling/rapport › Rapport › Forskning
Biomarkers for health, fertility and milk quality of dairy cows : Delivrable 2.5 Official deliverable of the 7th Framework Programme KBBE. / Sørensen, Peter; Moorby, J.; Shingfield, K.; Vestergaard, Mogens.
Adaptation of dairy cattle and goat breeds to organic and low input production systems. 2015. s. 108-115.Publikation: Bidrag til bog/antologi/rapport/proceeding › Bidrag til rapport › Forskning
Genetic control of environmental variation of two quantitative traits of Drosophila melanogaster revealed by whole-genome sequencing. / Sørensen, Peter; de los Campos, Gustavo; Morgante, Fabio; F C Mackay, Trudy; Sorensen, Daniel.
I: Genetics (Print), Bind 201, Nr. 2, 01.10.2015, s. 487-497.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Functional Insight From Fruit Flies on Human ADHD Candidate Genes. / Rohde, Palle Duun; Demontis, Ditte; Arvidson, Sandra Marie Neumann; Madsen, Lisbeth Strøm; Loeschcke, Volker; Sørensen, Peter; Børglum, Anders; Kristensen, Torsten Nygaard.
Genes, Brain, and Behavior 2015: 17th Annual Meeting of the International Behavioural and Neural Genetics Society. Uppsala, 2015. s. 35.Publikation: Bidrag til bog/antologi/rapport/proceeding › Konferencebidrag i proceedings › Forskning
Genetic Architecture of Micro-Environmental Plasticity in Drosophila melanogaster. / Morgante, Fabio; Sorensen, Peter; Sorensen, Daniel A.; Maltecca, Christian; Mackay, Trudy F. C.
I: Scientific Reports, Bind 5, 9785, 06.05.2015.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Genome-wide association and biological pathway analysis for milk-fat composition in Danish Holstein and Danish Jersey cattle. / Buitenhuis, Bart; Janss, Luc L G; Poulsen, Nina Aagaard; Larsen, Lotte Bach; Larsen, Mette Krogh; Sørensen, Peter.
I: B M C Genomics, Bind 15, Nr. 1112, 15.12.2014, s. 1-11.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Pharmacogenetic effects of 'candidate gene complexes' on stroke in the GenHAT study. / Sørensen, Izel F; Vazquez, Ana I; Irvin, Marguerite R; Sørensen, Peter; Davis, Barry R; Ford, Charles E; Boerwinkle, Eric; Eckfeldt, John H; Arnett, Donna K.
I: Pharmacogenetics and Genomics, Bind 24, Nr. 11, 11.2014, s. 556-563.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Changes in various metabolic parameters in blood and milk during experimental Escherichia coli mastitis for primiparous Holstein dairy cows during early lactation. / Moyes, Kasey M; Larsen, Torben; Sørensen, Peter; Ingvartsen, Klaus Lønne.
I: Journal of Animal Science and Biotechnology, Bind 5, 47, 10.2014.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Flies who cannot take the heat: Genome-wide gene expression analysis of temperature-sensitive lethality in an inbred line of Drosophila melanogaster. / Vermeulen, C.J; Sørensen, Peter; Gagalova, K.K.; Loeschcke, Volker.
I: Journal of Evolutionary Biology, Bind 27, Nr. 10, 10.2014, s. 2152-2162.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
A random set scoring model for prioritization of disease candidate genes using protein complexes and data-mining of GeneRIF, OMIM and PubMed records. / Jiang, Li; Edwards, Stefan McKinnon; Thomsen, Bo; Workman, Christopher T.; Guldbrandtsen, Bernt; Sørensen, Peter.
I: BMC Bioinformatics , Bind 15, Nr. 315, 24.09.2014, s. 1-13.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Tidsskriftartikel › Forskning › peer review
Imputation from 60K SNP data to whole-genome level in Danish Landrace and Duroc pigs. / Sarup, Pernille Merete; Guldbrandtsen, Bernt; Nielsen, Bjarne N; Sørensen, Peter; Jensen, Just.
I: EAAP Book of Abstracts, 25.08.2014, s. 169-169.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Konferenceabstrakt i tidsskrift › Forskning
Sequence-based partitioning of genomic variance using prior biological information. / Sørensen, Peter; Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sorensen, Daniel A.
I: EAAP Book of Abstracts, Bind 20, 25.08.2014, s. 167-167.Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avis › Konferenceabstrakt i tidsskrift › Forskning
Gene-based Association Approach Identify Genes Across Stress Traits in Fruit Flies. / Rohde, Palle Duun; Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sørensen, Peter.
2014. Paper præsenteret ved 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.Publikation: Konferencebidrag › Paper › Forskning › peer review
Genomic Feature Models. / Sørensen, Peter; Edwards, Stefan McKinnon; Rohde, Palle Duun.
2014. Paper præsenteret ved 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.Publikation: Konferencebidrag › Paper › Forskning › peer review
Influence of Family Structure on Variance Decomposition. / Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sørensen, Peter.
2014. Paper præsenteret ved 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.Publikation: Konferencebidrag › Paper › Forskning › peer review
Influence of Family Structure on Variance Decomposition. / Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sørensen, Peter.
2014. Poster session præsenteret ved 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.Publikation: Konferencebidrag › Poster › Forskning
Gene-based Association Approach Identify Genes Across Stress Traits in Fruit Flies. / Rohde, Palle Duun; Edwards, Stefan McKinnon; Sarup, Pernille Merete; Sørensen, Peter.
2014. Poster session præsenteret ved 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.Publikation: Konferencebidrag › Poster › Forskning
Genetic Analysis of Micro-environmental Plasticity in Drosophila melanogaster. / Morgante, Fabio; Sorensen, Daniel A; Sørensen, Peter; Maltecca, Christian; Mackay, Trudy F C.
2014. Poster session præsenteret ved 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.Publikation: Konferencebidrag › Poster › Forskning
Genetic Analysis of Micro-environmental Plasticity in Drosophila melanogaster. / Morgante, Fabio; Sorensen, Daniel A; Sørensen, Peter; Maltecca, Christian; Mackay, Trudy F C.
2014. Paper præsenteret ved 10th World Congress on Genetics Applied to Livestock Production (WCGALP), Vancouver, Canada.Publikation: Konferencebidrag › Paper › Forskning › peer review