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Albert Johannes Buitenhuis

Methods for interpreting lists of affected genes obtained in a DNA microarray experiment

Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avisKonferenceartikelForskningpeer review

Standard

Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. / Hedegaard, Jakob; Arce, Christina; Bicciato, Silvio; Bonnet, Agnès; Buitenhuis, Bart; Collado-Romero, Melania; Conley, Lene N; SanCristobal, Magali; Ferrari, Francesco; Garrido, Juan J; Groenen, Martien AM; Hornshøj, Henrik; Hulsegge, Ina; Jiang, Li; Jiménez-Marín, Ángeles; Kommadath, Arun; Lagarrigue, Sandrine; Leunissen, Jack AM; Liaubet, Laurence; Neerincx, Pieter BT; Nie, Haisheng; van der Poel, Jan; Prickett, Dennis; Ramirez-Boo, Maria; Robert-Granié, Christèle; Rebel, Johanna MJ; Skarman, Axel; Smits, Mari A; Sørensen, Peter; Tosser-Klopp, Gwenola; Watson, Michael.

I: BMC Proceedings, Nr. 4:S5, 2009.

Publikation: Bidrag til tidsskrift/Konferencebidrag i tidsskrift /Bidrag til avisKonferenceartikelForskningpeer review

Harvard

Hedegaard, J, Arce, C, Bicciato, S, Bonnet, A, Buitenhuis, B, Collado-Romero, M, Conley, LN, SanCristobal, M, Ferrari, F, Garrido, JJ, Groenen, MAM, Hornshøj, H, Hulsegge, I, Jiang, L, Jiménez-Marín, Á, Kommadath, A, Lagarrigue, S, Leunissen, JAM, Liaubet, L, Neerincx, PBT, Nie, H, van der Poel, J, Prickett, D, Ramirez-Boo, M, Robert-Granié, C, Rebel, JMJ, Skarman, A, Smits, MA, Sørensen, P, Tosser-Klopp, G & Watson, M 2009, 'Methods for interpreting lists of affected genes obtained in a DNA microarray experiment', BMC Proceedings, nr. 4:S5. https://doi.org/10.1186/1753-6561-3-S4-S5

APA

Hedegaard, J., Arce, C., Bicciato, S., Bonnet, A., Buitenhuis, B., Collado-Romero, M., Conley, L. N., SanCristobal, M., Ferrari, F., Garrido, J. J., Groenen, M. AM., Hornshøj, H., Hulsegge, I., Jiang, L., Jiménez-Marín, Á., Kommadath, A., Lagarrigue, S., Leunissen, J. AM., Liaubet, L., ... Watson, M. (2009). Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. BMC Proceedings, (4:S5). https://doi.org/10.1186/1753-6561-3-S4-S5

CBE

Hedegaard J, Arce C, Bicciato S, Bonnet A, Buitenhuis B, Collado-Romero M, Conley LN, SanCristobal M, Ferrari F, Garrido JJ, Groenen MAM, Hornshøj H, Hulsegge I, Jiang L, Jiménez-Marín Á, Kommadath A, Lagarrigue S, Leunissen JAM, Liaubet L, Neerincx PBT, Nie H, van der Poel J, Prickett D, Ramirez-Boo M, Robert-Granié C, Rebel JMJ, Skarman A, Smits MA, Sørensen P, Tosser-Klopp G, Watson M. 2009. Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. BMC Proceedings. (4:S5). https://doi.org/10.1186/1753-6561-3-S4-S5

MLA

Vancouver

Hedegaard J, Arce C, Bicciato S, Bonnet A, Buitenhuis B, Collado-Romero M o.a. Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. BMC Proceedings. 2009;(4:S5). https://doi.org/10.1186/1753-6561-3-S4-S5

Author

Hedegaard, Jakob ; Arce, Christina ; Bicciato, Silvio ; Bonnet, Agnès ; Buitenhuis, Bart ; Collado-Romero, Melania ; Conley, Lene N ; SanCristobal, Magali ; Ferrari, Francesco ; Garrido, Juan J ; Groenen, Martien AM ; Hornshøj, Henrik ; Hulsegge, Ina ; Jiang, Li ; Jiménez-Marín, Ángeles ; Kommadath, Arun ; Lagarrigue, Sandrine ; Leunissen, Jack AM ; Liaubet, Laurence ; Neerincx, Pieter BT ; Nie, Haisheng ; van der Poel, Jan ; Prickett, Dennis ; Ramirez-Boo, Maria ; Robert-Granié, Christèle ; Rebel, Johanna MJ ; Skarman, Axel ; Smits, Mari A ; Sørensen, Peter ; Tosser-Klopp, Gwenola ; Watson, Michael. / Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. I: BMC Proceedings. 2009 ; Nr. 4:S5.

Bibtex

@inproceedings{e16a9ee021e611dfa28b000ea68e967b,
title = "Methods for interpreting lists of affected genes obtained in a DNA microarray experiment",
abstract = "The aim of this paper was to describe and compare the methods used and the results obtained by the participants in a joint EADGENE (European Animal Disease Genomic Network of Excellence) and SABRE (Cutting Edge Genomics for Sustainable Animal Breeding) workshop focusing on post analysis of microarray data. The participating groups were provided with identical lists of microarray probes, including test statistics for three different contrasts, and the normalised log-ratios for each array, to be used as the starting point for interpreting the affected probes. The data originated from a microarray experiment conducted to study the host reactions in broilers occurring shortly after a secondary challenge with either a homologous or heterologous species of Eimeria",
author = "Jakob Hedegaard and Christina Arce and Silvio Bicciato and Agn{\`e}s Bonnet and Bart Buitenhuis and Melania Collado-Romero and Conley, {Lene N} and Magali SanCristobal and Francesco Ferrari and Garrido, {Juan J} and Groenen, {Martien AM} and Henrik Hornsh{\o}j and Ina Hulsegge and Li Jiang and {\'A}ngeles Jim{\'e}nez-Mar{\'i}n and Arun Kommadath and Sandrine Lagarrigue and Leunissen, {Jack AM} and Laurence Liaubet and Neerincx, {Pieter BT} and Haisheng Nie and {van der Poel}, Jan and Dennis Prickett and Maria Ramirez-Boo and Christ{\`e}le Robert-Grani{\'e} and Rebel, {Johanna MJ} and Axel Skarman and Smits, {Mari A} and Peter S{\o}rensen and Gwenola Tosser-Klopp and Michael Watson",
note = "Udgivelsesdato: 16. July Volumne: 3; null ; Conference date: 12-11-2008 Through 14-11-2008",
year = "2009",
doi = "10.1186/1753-6561-3-S4-S5",
language = "English",
journal = "B M C Proceedings",
issn = "1753-6561",
publisher = "BioMed Central Ltd.",
number = "4:S5",

}

RIS

TY - GEN

T1 - Methods for interpreting lists of affected genes obtained in a DNA microarray experiment

AU - Hedegaard, Jakob

AU - Arce, Christina

AU - Bicciato, Silvio

AU - Bonnet, Agnès

AU - Buitenhuis, Bart

AU - Collado-Romero, Melania

AU - Conley, Lene N

AU - SanCristobal, Magali

AU - Ferrari, Francesco

AU - Garrido, Juan J

AU - Groenen, Martien AM

AU - Hornshøj, Henrik

AU - Hulsegge, Ina

AU - Jiang, Li

AU - Jiménez-Marín, Ángeles

AU - Kommadath, Arun

AU - Lagarrigue, Sandrine

AU - Leunissen, Jack AM

AU - Liaubet, Laurence

AU - Neerincx, Pieter BT

AU - Nie, Haisheng

AU - van der Poel, Jan

AU - Prickett, Dennis

AU - Ramirez-Boo, Maria

AU - Robert-Granié, Christèle

AU - Rebel, Johanna MJ

AU - Skarman, Axel

AU - Smits, Mari A

AU - Sørensen, Peter

AU - Tosser-Klopp, Gwenola

AU - Watson, Michael

N1 - Udgivelsesdato: 16. July Volumne: 3

PY - 2009

Y1 - 2009

N2 - The aim of this paper was to describe and compare the methods used and the results obtained by the participants in a joint EADGENE (European Animal Disease Genomic Network of Excellence) and SABRE (Cutting Edge Genomics for Sustainable Animal Breeding) workshop focusing on post analysis of microarray data. The participating groups were provided with identical lists of microarray probes, including test statistics for three different contrasts, and the normalised log-ratios for each array, to be used as the starting point for interpreting the affected probes. The data originated from a microarray experiment conducted to study the host reactions in broilers occurring shortly after a secondary challenge with either a homologous or heterologous species of Eimeria

AB - The aim of this paper was to describe and compare the methods used and the results obtained by the participants in a joint EADGENE (European Animal Disease Genomic Network of Excellence) and SABRE (Cutting Edge Genomics for Sustainable Animal Breeding) workshop focusing on post analysis of microarray data. The participating groups were provided with identical lists of microarray probes, including test statistics for three different contrasts, and the normalised log-ratios for each array, to be used as the starting point for interpreting the affected probes. The data originated from a microarray experiment conducted to study the host reactions in broilers occurring shortly after a secondary challenge with either a homologous or heterologous species of Eimeria

U2 - 10.1186/1753-6561-3-S4-S5

DO - 10.1186/1753-6561-3-S4-S5

M3 - Conference article

JO - B M C Proceedings

JF - B M C Proceedings

SN - 1753-6561

IS - 4:S5

Y2 - 12 November 2008 through 14 November 2008

ER -